Merge ~rbalint/autopkgtest-cloud:r-bioc-variantannotation-big into autopkgtest-cloud:master

[Balint Reczey]

diff --git a/worker-config-production/worker-bos01-arm64.conf b/worker-config-production/worker-bos01-arm64.conf
index c45b8f3..3dcec8d 100644
--- a/worker-config-production/worker-bos01-arm64.conf
+++ b/worker-config-production/worker-bos01-arm64.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic eoan focal groovy
 architectures = arm64
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts lintian cl-ironclad samtools mysql-8.0 satpy python-cffi yt
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts lintian cl-ironclad samtools mysql-8.0 satpy python-cffi yt
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft snapd cross-toolchain-base automake-1.16 salt
 blacklist = bionic/arm64/stress-ng bionic/arm64/upstart bionic/arm64/libnih bionic/arm64/r-cran-vioplot bionic/arm64/openjdk-lts eoan/arm64/openjdk-lts focal/arm64/openjdk-lts groovy/arm64/openjdk-lts xenial/arm64/virtualbox-ext-pack bionic/arm64/virtualbox-ext-pack eoan/arm64/openjdk-13 focal/arm64/openjdk-13 groovy/arm64/openjdk-13 eoan/arm64/openjdk-14 focal/arm64/openjdk-14 groovy/arm64/openjdk-14
 
diff --git a/worker-config-production/worker-bos01-ppc64el.conf b/worker-config-production/worker-bos01-ppc64el.conf
index 7e3eae1..c2b55b4 100644
--- a/worker-config-production/worker-bos01-ppc64el.conf
+++ b/worker-config-production/worker-bos01-ppc64el.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic eoan focal groovy
 architectures = ppc64el
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 makedumpfile samtools satpy python-cffi yt
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 makedumpfile samtools satpy python-cffi yt
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft snapd systemd systemd-upstream cross-toolchain-base
 blacklist = bionic/ppc64el/stress-ng bionic/ppc64el/upstart bionic/ppc64el/libnih bionic/ppc64el/r-cran-vioplot bionic/ppc64el/openjdk-lts xenial/ppc64el/virtualbox-ext-pack bionic/ppc64el/virtualbox-ext-pack
 
diff --git a/worker-config-production/worker-bos01-s390x.conf b/worker-config-production/worker-bos01-s390x.conf
index 7442774..609c10b 100644
--- a/worker-config-production/worker-bos01-s390x.conf
+++ b/worker-config-production/worker-bos01-s390x.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic eoan focal groovy
 architectures = s390x
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 samtools satpy python-cffi yt
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 samtools satpy python-cffi yt
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft snapd cross-toolchain-base
 blacklist = bionic/s390x/stress-ng bionic/s390x/upstart bionic/s390x/libnih bionic/s390x/r-cran-vioplot bionic/s390x/openjdk-lts xenial/s390x/virtualbox-ext-pack bionic/s390x/virtualbox-ext-pack
 
diff --git a/worker-config-production/worker-bos01.conf b/worker-config-production/worker-bos01.conf
index 3c0737e..e3d327e 100644
--- a/worker-config-production/worker-bos01.conf
+++ b/worker-config-production/worker-bos01.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic eoan focal groovy
 architectures = ppc64el
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 samtools satpy python-cffi yt
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 samtools satpy python-cffi yt
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft snapd cross-toolchain-base
 blacklist = bionic/ppc64el/stress-ng bionic/ppc64el/upstart bionic/ppc64el/libnih bionic/ppc64el/r-cran-vioplot bionic/ppc64el/openjdk-lts
 
diff --git a/worker-config-production/worker-bos02-arm64.conf b/worker-config-production/worker-bos02-arm64.conf
index 12c2b0e..9c9bc21 100644
--- a/worker-config-production/worker-bos02-arm64.conf
+++ b/worker-config-production/worker-bos02-arm64.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic eoan focal groovy
 architectures = arm64
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts lintian cl-ironclad samtools mysql-8.0 satpy python-cffi yt
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts lintian cl-ironclad samtools mysql-8.0 satpy python-cffi yt
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft snapd cross-toolchain-base automake-1.16 salt
 blacklist = bionic/arm64/stress-ng bionic/arm64/upstart bionic/arm64/libnih bionic/arm64/r-cran-vioplot bionic/arm64/openjdk-lts eoan/arm64/openjdk-lts focal/arm64/openjdk-lts groovy/arm64/openjdk-lts xenial/arm64/virtualbox-ext-pack bionic/arm64/virtualbox-ext-pack eoan/arm64/openjdk-13 focal/arm64/openjdk-13 focal/arm64/openjdk-13 eoan/arm64/openjdk-14 focal/arm64/openjdk-14 focal/arm64/openjdk-14
 
diff --git a/worker-config-production/worker-bos02-ppc64el.conf b/worker-config-production/worker-bos02-ppc64el.conf
index 0517cd5..dc2afec 100644
--- a/worker-config-production/worker-bos02-ppc64el.conf
+++ b/worker-config-production/worker-bos02-ppc64el.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic eoan focal groovy
 architectures = ppc64el
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 pandas makedumpfile samtools satpy python-cffi yt
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 pandas makedumpfile samtools satpy python-cffi yt
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft snapd systemd systemd-upstream cross-toolchain-base
 blacklist = bionic/ppc64el/stress-ng bionic/ppc64el/upstart bionic/ppc64el/libnih bionic/ppc64el/r-cran-vioplot bionic/ppc64el/openjdk-lts xenial/ppc64el/virtualbox-ext-pack bionic/ppc64el/virtualbox-ext-pack
 
diff --git a/worker-config-production/worker-bos02-s390x.conf b/worker-config-production/worker-bos02-s390x.conf
index 7442774..609c10b 100644
--- a/worker-config-production/worker-bos02-s390x.conf
+++ b/worker-config-production/worker-bos02-s390x.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic eoan focal groovy
 architectures = s390x
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 samtools satpy python-cffi yt
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 samtools satpy python-cffi yt
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft snapd cross-toolchain-base
 blacklist = bionic/s390x/stress-ng bionic/s390x/upstart bionic/s390x/libnih bionic/s390x/r-cran-vioplot bionic/s390x/openjdk-lts xenial/s390x/virtualbox-ext-pack bionic/s390x/virtualbox-ext-pack
 
diff --git a/worker-config-production/worker.conf b/worker-config-production/worker.conf
index 1a71c0a..3ca7700 100644
--- a/worker-config-production/worker.conf
+++ b/worker-config-production/worker.conf
@@ -16,7 +16,7 @@ releases = precise trusty xenial bionic eoan focal groovy
 architectures = i386 amd64
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-cran-igraph botch mathicgb ganeti lttng-modules python2.7 python3.6 python3.7 python3.8 python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 nodejs cl-ironclad python-scipy scipy cross-toolchain-base-mipsen mkl-dnn samtools satpy python-cffi yt
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python2.7 python3.6 python3.7 python3.8 python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 nodejs cl-ironclad python-scipy scipy cross-toolchain-base-mipsen mkl-dnn samtools satpy python-cffi yt
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft cross-toolchain-base
 blacklist = bionic/i386/upstart bionic/amd64/upstart bionic/i386/libnih bionic/amd64/libnih bionic/i386/r-cran-vioplot bionic/amd64/r-cran-vioplot bionic/amd64/stress-ng bionic/i386/stress-ng bionic/i386/openjdk-lts xenial/amd64/virtualbox-ext-pack bionic/amd64/virtualbox-ext-pack xenial/i386/virtualbox-ext-pack bionic/i386/virtualbox-ext-pack