Merge ~ginggs/autopkgtest-cloud:big_packages-r-bioc-beachmat into autopkgtest-cloud:master

[Graham Inggs]

Add r-bioc-beachmat to big_packages
autopkgtests of latest version are Killed everywhere except armhf

[Iain Lane (laney)]

review: Approve

diff --git a/worker-config-production/worker-bos01-arm64.conf b/worker-config-production/worker-bos01-arm64.conf
index 24e9e11..f76ca1d 100644
--- a/worker-config-production/worker-bos01-arm64.conf
+++ b/worker-config-production/worker-bos01-arm64.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic focal groovy hirsute
 architectures = arm64
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts lintian cl-ironclad samtools mysql-8.0 satpy python-cffi yt scipy skimage node-immutable-tuple node-redis gscan2pdf cwltool multipath-tools tgt dask petsc4py deal.ii octave-parallel
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts lintian cl-ironclad samtools mysql-8.0 satpy python-cffi yt scipy skimage node-immutable-tuple node-redis gscan2pdf cwltool multipath-tools tgt dask petsc4py deal.ii octave-parallel r-bioc-beachmat
 long_tests = glibc gutenprint gmp-ecm lintian open-iscsi diffoscope snapcraft snapd cross-toolchain-base automake-1.16 salt epson-inkjet-printer-escpr haveged sshuttle
 blacklist = bionic/arm64/stress-ng bionic/arm64/upstart bionic/arm64/libnih bionic/arm64/r-cran-vioplot bionic/arm64/openjdk-lts focal/arm64/openjdk-lts groovy/arm64/openjdk-lts xenial/arm64/virtualbox-ext-pack bionic/arm64/virtualbox-ext-pack focal/arm64/openjdk-13 groovy/arm64/openjdk-13 focal/arm64/openjdk-14 groovy/arm64/openjdk-14 hirsute/arm64/openjdk-lts hirsute/arm64/openjdk-13 hirsute/arm64/openjdk-14 hirsute/arm64/rust-onig hirsute/arm64/debuerreotype
 
diff --git a/worker-config-production/worker-bos01-ppc64el.conf b/worker-config-production/worker-bos01-ppc64el.conf
index 73726a4..b645e5a 100644
--- a/worker-config-production/worker-bos01-ppc64el.conf
+++ b/worker-config-production/worker-bos01-ppc64el.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic focal groovy hirsute
 architectures = ppc64el
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 makedumpfile samtools satpy python-cffi yt scipy skimage puma cross-toolchain-base cwltool multipath-tools tgt dask petsc4py deal.ii libsis-jhdf5-java octave-parallel
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 makedumpfile samtools satpy python-cffi yt scipy skimage puma cross-toolchain-base cwltool multipath-tools tgt dask petsc4py deal.ii libsis-jhdf5-java octave-parallel r-bioc-beachmat
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft snapd systemd systemd-upstream cross-toolchain-base
 blacklist = bionic/ppc64el/stress-ng bionic/ppc64el/upstart bionic/ppc64el/libnih bionic/ppc64el/r-cran-vioplot bionic/ppc64el/openjdk-lts xenial/ppc64el/virtualbox-ext-pack bionic/ppc64el/virtualbox-ext-pack hirsute/ppc64el/rust-onig hirsute/ppc64el/debuerreotype
 
diff --git a/worker-config-production/worker-bos01-s390x.conf b/worker-config-production/worker-bos01-s390x.conf
index 802cbfb..c8c1e47 100644
--- a/worker-config-production/worker-bos01-s390x.conf
+++ b/worker-config-production/worker-bos01-s390x.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic focal groovy hirsute
 architectures = s390x
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 samtools satpy python-cffi yt scipy multipath-tools tgt dask deal.ii octave-parallel mysql-connector-c++
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 samtools satpy python-cffi yt scipy multipath-tools tgt dask deal.ii octave-parallel mysql-connector-c++ r-bioc-beachmat
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft snapd cross-toolchain-base
 blacklist = bionic/s390x/stress-ng bionic/s390x/upstart bionic/s390x/libnih bionic/s390x/r-cran-vioplot bionic/s390x/openjdk-lts xenial/s390x/virtualbox-ext-pack bionic/s390x/virtualbox-ext-pack hirsute/s390x/rust-onig hirsute/s390x/debuerreotype
 
diff --git a/worker-config-production/worker-bos02-arm64.conf b/worker-config-production/worker-bos02-arm64.conf
index 6ce2a06..59db79b 100644
--- a/worker-config-production/worker-bos02-arm64.conf
+++ b/worker-config-production/worker-bos02-arm64.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic focal groovy hirsute
 architectures = arm64
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts lintian cl-ironclad samtools mysql-8.0 satpy python-cffi yt scipy skimage node-immutable-tuple node-redis gscan2pdf cwltool multipath-tools tgt dask petsc4py deal.ii octave-parallel
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts lintian cl-ironclad samtools mysql-8.0 satpy python-cffi yt scipy skimage node-immutable-tuple node-redis gscan2pdf cwltool multipath-tools tgt dask petsc4py deal.ii octave-parallel r-bioc-beachmat
 long_tests = glibc gutenprint gmp-ecm lintian open-iscsi diffoscope snapcraft snapd cross-toolchain-base automake-1.16 salt epson-inkjet-printer-escpr haveged sshuttle
 blacklist = bionic/arm64/stress-ng bionic/arm64/upstart bionic/arm64/libnih bionic/arm64/r-cran-vioplot bionic/arm64/openjdk-lts focal/arm64/openjdk-lts groovy/arm64/openjdk-lts xenial/arm64/virtualbox-ext-pack bionic/arm64/virtualbox-ext-pack focal/arm64/openjdk-13 focal/arm64/openjdk-13 focal/arm64/openjdk-14 focal/arm64/openjdk-14 hirsute/arm64/openjdk-lts hirsute/arm64/openjdk-13 hirsute/arm64/openjdk-14 hirsute/arm64/rust-onig hirsute/arm64/debuerreotype
 
diff --git a/worker-config-production/worker-bos02-ppc64el.conf b/worker-config-production/worker-bos02-ppc64el.conf
index a95a105..9233641 100644
--- a/worker-config-production/worker-bos02-ppc64el.conf
+++ b/worker-config-production/worker-bos02-ppc64el.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic focal groovy hirsute
 architectures = ppc64el
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 pandas makedumpfile samtools satpy python-cffi yt scipy skimage puma cross-toolchain-base cwltool multipath-tools tgt dask petsc4py deal.ii libsis-jhdf5-java octave-parallel
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 pandas makedumpfile samtools satpy python-cffi yt scipy skimage puma cross-toolchain-base cwltool multipath-tools tgt dask petsc4py deal.ii libsis-jhdf5-java octave-parallel r-bioc-beachmat
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft snapd systemd systemd-upstream cross-toolchain-base
 blacklist = bionic/ppc64el/stress-ng bionic/ppc64el/upstart bionic/ppc64el/libnih bionic/ppc64el/r-cran-vioplot bionic/ppc64el/openjdk-lts xenial/ppc64el/virtualbox-ext-pack bionic/ppc64el/virtualbox-ext-pack hirsute/ppc64el/rust-onig hirsute/ppc64el/debuerreotype
 
diff --git a/worker-config-production/worker-bos02-s390x.conf b/worker-config-production/worker-bos02-s390x.conf
index 802cbfb..c8c1e47 100644
--- a/worker-config-production/worker-bos02-s390x.conf
+++ b/worker-config-production/worker-bos02-s390x.conf
@@ -16,7 +16,7 @@ releases = trusty xenial bionic focal groovy hirsute
 architectures = s390x
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 samtools satpy python-cffi yt scipy multipath-tools tgt dask deal.ii octave-parallel mysql-connector-c++
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 samtools satpy python-cffi yt scipy multipath-tools tgt dask deal.ii octave-parallel mysql-connector-c++ r-bioc-beachmat
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft snapd cross-toolchain-base
 blacklist = bionic/s390x/stress-ng bionic/s390x/upstart bionic/s390x/libnih bionic/s390x/r-cran-vioplot bionic/s390x/openjdk-lts xenial/s390x/virtualbox-ext-pack bionic/s390x/virtualbox-ext-pack hirsute/s390x/rust-onig hirsute/s390x/debuerreotype
 
diff --git a/worker-config-production/worker.conf b/worker-config-production/worker.conf
index 27a06b8..9d7c435 100644
--- a/worker-config-production/worker.conf
+++ b/worker-config-production/worker.conf
@@ -16,7 +16,7 @@ releases = precise trusty xenial bionic focal groovy hirsute
 architectures = i386 amd64
 setup_command = $AUTOPKGTEST_CLOUD_DIR/worker-config-production/setup-canonical.sh
 setup_command2 = $CHECKOUTDIR/setup-commands/setup-testbed
-big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python2.7 python3.6 python3.7 python3.8 python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 nodejs cl-ironclad python-scipy scipy cross-toolchain-base-mipsen mkl-dnn samtools satpy python-cffi yt skimage scikit-learn silx statsmodels puma multipath-tools tgt dask assimp mariadb-10.3 mariadb-10.5 deal.ii libsis-jhdf5-java octave-parallel
+big_packages = binutils chromium-browser glibc libreoffice linux linux-* tdb firefox akonadi julia meson python-cryptography python-dmsh pyresample libtext-bidi-perl python-hypothesis nova rocs camitk kineticstools r-bioc-variantannotation r-cran-igraph botch mathicgb ganeti lttng-modules python2.7 python3.6 python3.7 python3.8 python-ruffus openjdk-8 openjdk-lts openjdk-13 openjdk-14 nodejs cl-ironclad python-scipy scipy cross-toolchain-base-mipsen mkl-dnn samtools satpy python-cffi yt skimage scikit-learn silx statsmodels puma multipath-tools tgt dask assimp mariadb-10.3 mariadb-10.5 deal.ii libsis-jhdf5-java octave-parallel r-bioc-beachmat
 long_tests = gutenprint gmp-ecm open-iscsi diffoscope snapcraft cross-toolchain-base mercurial
 blacklist = bionic/i386/upstart bionic/amd64/upstart bionic/i386/libnih bionic/amd64/libnih bionic/i386/r-cran-vioplot bionic/amd64/r-cran-vioplot bionic/amd64/stress-ng bionic/i386/stress-ng bionic/i386/openjdk-lts xenial/amd64/virtualbox-ext-pack bionic/amd64/virtualbox-ext-pack xenial/i386/virtualbox-ext-pack bionic/i386/virtualbox-ext-pack hirsute/i386/rust-onig hirsute/amd64/rust-onig