fold-grammars

fold-grammars:test_codestyle

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Last commit made on 2020-07-07
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git clone -b test_codestyle https://git.launchpad.net/fold-grammars

Branch merges

Branch information

Name:
test_codestyle
Repository:
lp:fold-grammars

Recent commits

fd16598... by Stefan Janssen <email address hidden>

test gen_parser2 branch

762854d... by Stefan Janssen

trigger rebuild

e3bddc3... by Stefan Janssen

test codestyle changes in gapc

0b3c311... by Stefan Janssen <email address hidden>

Merge pull request #7 from jlab/fix_stefanstyletests

Fix stefanstyletests

a32ff3a... by Stefan Janssen

fixed typo

8f0bf83... by Stefan Janssen

using general syntax to invoke binaries + some documentation

de41a9b... by Stefan Janssen

updated truth to a) replace concrete path names with abstract ROOTDIR and BGAPDIR variables
and b) to make all nucleotide sequences uppercase which is a newly introduced change in bgap: you can still input small letter nucleotids, but all returned ones will be uppercase

7bee24c... by Stefan Janssen

to avoid ignoring CMD lines, we now replace concrete prefix paths with BGAPDIR and ROOTDIR in truth datasets and use SED to replace the concrete paths after the test execution.

849c139... by Stefan Janssen

also execute tests for non existing task "knots"

b34c73a... by Stefan Janssen

the unstable k-means clustering algorithm returns slightly different values without changing the pseudoenergies. It is very likely that this change is due to modifications of underlying libraries. I don't think it is worth to further track and think we should simply ignore these lines in comparison.