fold-grammars:outside_grammar

Last commit made on 2023-07-06
Get this branch:
git clone -b outside_grammar https://git.launchpad.net/fold-grammars

Branch merges

Branch information

Name:
outside_grammar
Repository:
lp:fold-grammars

Recent commits

b520798... by Stefan Janssen <email address hidden>

Update c-cpp.yml

e472e0e... by Stefan Janssen

reflect addition of parameter --tileSize,-L to generic gapc transpile products

a96ce05... by Stefan Janssen

adds the containsBase filter back in for cofolding

0349e90... by Stefan Janssen

linting

cce2522... by Stefan Janssen

remove outside versions of ADP components, as they can now automatically generated by gapc

06f78d6... by Stefan Janssen

base pair probabilities change due to previously wrong ribosom scoring (RNAalifold comes with its own errors, see my thesis, thus cannot be used as gold standard)

6d3b6d2... by Stefan Janssen

adding outside functions

94c026f... by Stefan Janssen

check out outside branch of gacp

7bf2d74... by Stefan Janssen

generate outside grammar via gapc instead of using the manual version

cdc954b... by Stefan Janssen

input duplication no longer necessary