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7. By Andreas Tille on 2012-04-25

[ Charles Plessy ]
* renamed debian/upstream-metadata.yaml to debian/upstream

[ Andreas Tille ]
* debian/upstream:
   - Removed duplicated entry DOI
   - Moved PMID to references
* debian/source/format: 3.0 (quilt)
* debian/reference: removed because references are kept in
  debian/upstream (also removed from debian/docs)
* debian/control:
   - Standards-Version: 3.9.3 (no changes needed)
   - Fixed Vcs fields
   - Build-Depends: dh-autoreconf
   - Dropped from Build-Depends: quilt, cdbs
* debian/patches/20_prevent_-64_option.patch: Dropped in favour
  of using dh-autoreconf
* debian/rules: converted to dh
* debian/copyright: cme fix dpkg-copyright
* debian/patches/gcc-4.7.patch: Enable building with g++-4.7
   Closes: #667270
* debian/README.source: Removed because there is no point any
  more to explain how to use quilt

6. By Charles Plessy on 2011-03-13

* Development of Maq stopped in 2008. Its successors are BWA and SAMtools.
  (debian/control, debian/maq.doc-base).
* DEP-5 conformant debian/copyright file, checked with ‘config-edit’.
* Use Debhelper 8 (debian/control, debian/compat).
* Collected various information in debian/upstream-metadata.yaml.
* Incremented Standards-Version in debian/policy to reflect
  conformance with Policy 3.9.1 (no changes needed).

5. By Charles Plessy on 2009-07-17

* Distribute scripts that are not installed by upstream’s
  makefile in /usr/share/maq (debian/install).
* Incremented Standards-Version in debian/policy to reflect
  conformance with Policy 3.8.2 (no changes needed).
* debian/patch: made headers conformant with current draft of DEP3.

4. By Andreas Tille on 2009-04-16

* Enable LARGEFILE64_SOURCE to prevent a problem with zlib on
  64bit archs (Thanks to Peter Green <email address hidden> for
  the patch)
  Closes: #506009
* Standards-Version: 3.8.1 (no changes needed)

3. By Charles Plessy on 2008-11-16

* New upstream release 0.7.1 (Closes: 505820)
  - Accepts reads shorter than 127 bp (63 bp before).
  - .map alignment changes and not backward-compatible.
  - Reversion to short reads possible with --enable-shortreads.
* New upstream release 0.6.8
  - New features for the 1000 genome project.
  - Error dependency coefficient reduced from 0.93 to 0.85.
  - Added mapvalidate command.
  - Support generating GLF format.
  - The mapcheck command can optionally dump additional information.
* debian/patches:
  - 20_perl_path.patch deleted because accepted upstream.
  - 10_prevent_-64_option.patch reorganised to only modify configure.ac
    and forwarded upstream.
  - 20_prevent_-64_option.patch changes configure and can be regenerated
    by running autoreconf.
* debian/control: typo corrected in short description (Closes: #492979)
* debian/reference: BibTeX reference downloaded from
  http://genome.cshlp.org/citmgr?gca=genome;18/11/1851 with abstract
  removed because it is a copyrighted work.
* debian/README.Sources renamed README.source to comply with Policy.

2. By Andreas Tille on 2008-07-16

[ Charles Plessy ]
* Initial release (Closes: #489836)

[ Andreas Tille ]
* Rudely deleted -m64 option from configure because multiarch
  building leads to several problems

1. By Andreas Tille on 2008-07-16

Import upstream version 0.6.7