lp:ubuntu/utopic-proposed/ncbi-blast+

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19. By Aaron M. Ucko

* debian/patches/include_typeinfo: Patch include/corelib/ncbistl.hpp to
  ensure sufficient coverage; fix typos in patch headers. (Closes: #753190.)
* Standards-Version: 3.9.4. (Already compliant.)

18. By Olivier Sallou <email address hidden>

d/patches/include_typeinfo (Closes: #753190).

17. By Olivier Sallou <email address hidden>

New upstream release

16. By Aaron M. Ucko

* debian/patches/use_pie_for_apps: Explicitly build all executables with
  -fPIE -pie, to avoid giving project_tree_builder a partial PIE
  treatment that now fails on mips and mipsel. (Closes: #710807.)
* debian/rules: Retire redundant APP_LDFLAGS override.
* Standards-Version: 3.9.4. (Already compliant.)

15. By Olivier Sallou <email address hidden>

* New upstream release
  - Thanks to Tim Booth for package update help.

14. By Olivier Sallou <email address hidden>

debian/series: active patch fix_arm_mips_build (Closes: #688661).

13. By Olivier Sallou <email address hidden>

* debian/patches/fix_arm_mips_build: Fix FTBS on ARM and MIPS
  (Closes: #688661).
* debian/rules: rename seedtop to seedtop+ to avoid blast2 conflict
  (Closes: #688684).

12. By Olivier Sallou <email address hidden>

New upstream release

11. By Aaron M. Ucko

[ Aaron M. Ucko ]
* debian/patches/fix_gcc47_errors: fix various GCC 4.7 compilation
  errors and warnings. (Closes: #669679.)
  - Explicitly qualify more dependent names originating in base templates.
  - Directly #include headers as needed.
  - Use modern syntax for making protected base members public.
  - Add forward declarations as needed.
* Wrap and sort build dependencies to ease maintenance thereof.
* Enable full hardening flags, introducing a small patch
  (use_pie_for_apps) to reflect the need to build executables and
  libraries differently.
* Use upstream's new --with-symbols flag in nostrip builds.

[ Andreas Tille ]
* debian/control: Modernize Vcs-* fields.

10. By Olivier Sallou <email address hidden>

debian/patches/wrong_path_to_touch.patch :Fix upstream FTBFS on the Hurd
hardcodes wrong path to touch (Closes: #663244)

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