lp:ubuntu/trusty/ruby-bio
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- 7. By Cédric Boutillier <email address hidden>
-
* debian/
ruby-tests. rb: choose to define external encoding if Encoding is
defined instead of checking version of Ruby, which was too strict.
(Closes: #720240)
* Tighten dependency on ruby-libxml and gem2deb to ensure Ruby 2.0 support.
(Closes: #730644)
* Bump Standards-Version to 3.9.5 (no changes needed) - 6. By Cédric Boutillier <email address hidden>
-
* Imported Upstream version 1.4.3.0001
* debian/control:
+ remove obsolete DM-Upload-Allowed flag
+ use canonical URI in Vcs-* fields
+ build-depend on ruby-test-unit
+ bump Standards-Version to 3.9.4 (no changes needed)
+ update my email address
+ drop transitional packages
* debian/patches:
+ drop disable-test-soap. patch, fixed upstream
+ drop fix_definition_CutSymbol_ in_test_ cut_symbol. patch, fixed upstream
+ drop do_not_rely_on_ keys_order_ for_hashes. patch, fixed upstream
+ omit chi2 tests instead of commenting them out
+ add remove_rubygems. patch: remove requirement on rubygems from bin/bioruby
* debian/ruby-tests. rb: do not exclude manually tests requiring network in
ruby-tests.rb, now moved to a dedicated directory by upstream
* remove debian/source/ lintian- overrides, related to transitional packages
* install KNOWN_ISSUES.rdoc as documentation
* provide more complete copyright information - 5. By Cédric Boutillier <email address hidden>
-
[ Andreas Tille ]
* debian/upstream: Add citation information according to
https://wiki.debian. org/UpstreamMet adata (Closes: #675061) [ Cédric Boutillier ]
* Add myself to Uploaders:
* Bump Standards-Version: to 3.9.3 (no changes needed)
* Update debian/copyright to cover also setup.rb, sample/* and
test/data/uniprot/ p53_human. uniprot
* debian/patches:
+ add disable_tests_using_ chi2.patch, disabling randomly failing tests
+ add do_not_rely_on_ keys_order_ for_hashes. patch, fixing FTBFS
(Closes: #674337)
+ add fix_shebang_for_examples. patch, ensuring the shebang in
sample/biofetch. rb is correct
* Build-depend on gem2deb >= 0.3.0
* Register HTML tutorials in doc-base - 4. By Cédric Boutillier <email address hidden>
-
* Remove some tests depending on a access to the Internet. Closes: #654985
* Add fix_definition_CutSymbol_ in_test_ cut_symbol. patch to ensure that
Bio::RestrictionEnzy me::CutSymbol is defined
* Set to extra the priority of transitional packages
* Depends on ruby-libxml instead of libxml-ruby - 3. By Lucas Nussbaum <email address hidden>
-
* New upstream version.
+ Fixes build failure. Closes: #642035.
* fix typos in debian/copyright.
* document disable-test-soap. patch. - 2. By Lucas Nussbaum <email address hidden>
-
Switch to gem2deb packaging. Rename binary and source package, introduce
transitional packages.
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