lp:ubuntu/saucy/genometools
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Branch information
- Owner:
- Ubuntu branches
- Status:
- Mature
Recent revisions
- 6. By Sascha Steinbiss
-
* New upstream release
* bugfixes and cleanups
* development tool `gt sain' added to run an induced suffix array sorting
algorithm
* the -typecheck option in the `gt gff3` and `gt gff3validator` tools
now also validates parent (part-of) relationships, see -help output for
details
* new option -encseq besides -seqfile(s) and -regionmapping to select a
encseq index as a sequence source
* GtBioseq backend switched to GtEncseq
* GtSeqCol is now an interface, GtEncseqCol added
* GtRankedList added
* GtSNPAnnotatorStream and `gt snpper' tool added
* node sorting code is now aware of MD5 hash presence
* compatibility with old Pango versions inproved - 3. By Sascha Steinbiss
-
* New upstream release
[ Sponsor Steffen Moeller ]
* Update of policy to 3.9.4
* Added DMUA flag - 2. By Sascha Steinbiss
-
* Initial release (Closes: #657923)
* the GFF3 parser now handles children which are defined before their parents
* many small improvements to the GFF3 parser
Branch metadata
- Branch format:
- Branch format 7
- Repository format:
- Bazaar repository format 2a (needs bzr 1.16 or later)
- Stacked on:
- lp:ubuntu/trusty/genometools