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4. By Andreas Tille on 2012-04-26

* New upstream version incorporating the previous patches as
  well as the LaTeX source of the documentation
* debian/patches/use-dpkg-buildflags.patch: Make sure hardening
  flags will really propagate
* debian/{control,rules}: Use mpi version of cd-hit
* README.Debian: Tell users that we are using mpi and they should
  ask for an alternative if needed
* debian/*.1, debian/manpages: Deleted in favour of autogenerated
  manpages using help2man; Remark: the manually edited pages were
  slightly better regarding "SEE ALSO" and "AUTHORS" sections but
  it is better to auto-generate the pages to stay with changes of
  future versions
* debian/rules: Use help2man 2 create manpages whereever possible
* debian/patches/enable_help2man.patch: Fix some minor issues to
  get less error output in man pages

3. By Andreas Tille on 2012-04-22

[ Charles Plessy ]
* renamed debian/upstream-metadata.yaml to debian/upstream

[ Andreas Tille ]
* New upstream version
* debian/watch: Fixed to reflect the change on code.google.com
* debian/control: Standards-Version: 3.9.3 (no changes needed)
* debian/copyright: Fixed DEP5 and verified using
    cme fix dpkg-copyright
* debian/patches/gcc-4.7.patch: Enable building with g++-4.7
  Closes: #667134
* debian/upstream:
   - use BibTeX format to specify author
   - Move DOI+PMID to References
   - Differentiate between URl and eprint
* debhelper 9 (control+compat)

2. By Andreas Tille on 2011-12-14

* Initial release (Closes: #652074)
* This package is recommended by the package qiime and thus it also
  Closes: #651983

1. By Andreas Tille on 2011-12-14

Import upstream version 4.5.7