lp:ubuntu/natty/ncbi-tools6

Created by James Westby and last modified
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10. By Aaron M. Ucko

* debian/rules
  - Clean up compilation settings; in particular, use dpkg-buildflags rather
    than relying on dpkg-buildpackage to have set CFLAGS appropriately.
  - (clean): restore expected empty directories if necessary,
    for compatibility with VCSes (notably git) that don't track them.
  - (VIB): add asndisc, as upstream takes care to publish binaries thereof.
* debian/ncbi-tools6.install: likewise add asndisc.
* (debian/).gitignore: Ignore content generated during build.
* make/makenet.unx: don't link asndisc against extraneous libraries.
* doc/man/asndisc.1: throw together a man page for asndisc.
* doc/man/cleanasn.1: fix SEE ALSO formatting.
* debian/control:
  - bump dpkg-dev build-dep to >= 1.15.7 for dpkg-buildflags.
  - Standards-Version: 3.9.1 (already compliant).
  - note switch to git-mediated Debian-Med team maintenance.

9. By Aaron M. Ucko

* New upstream release.
* debian/libncbi6.symbols: update accordingly.
* debian/control: clean up obsolete or redundant relationship declarations.

8. By Aaron M. Ucko

* New upstream release.
* debian/lib{ncbi6,vibrant6a}.symbols: update accordingly.
* doc/man/*.1: update accordingly as well.
* debian/control: declare compliance with Policy 3.8.2 (no changes needed).

7. By Aaron M. Ucko

* New upstream release; uploading to unstable now that lenny is out.
* debian/lib{ncbi6,vibrant6a}.symbols: update accordingly.
* doc/man/*.1: update accordingly as well.
* debian/control: place lib*-dbg in the new debug section, per the
  current override file.
* debian/control: declare compliance with Policy 3.8.1 (no changes needed).
* api/aliread.c: merge in fix (from 6.1.20080302-4) to undefined use of
  sprintf caught by Kees Cook's scan.
* debian/watch: belatedly update regex to recognize releases like the
  previous one ([6.1.]20081116a).

6. By Aaron M. Ucko

* doc/fwd_check.sh: use mktemp rather than predictable names (formally
  CVE-2008-5149).
* api/aliread.c: fix undefined use of sprintf caught by Kees Cook's scan.

5. By Aaron M. Ucko

tools/readdb.c: enable madvise()-based code on all glibc (hence all
Debian) systems, not just Linux. (Closes: #490437.)

4. By Aaron M. Ucko

* New upstream release.
* Don't bother linking against indirectly used system libraries.
* Update man pages.

3. By Aaron M. Ucko

* Fix FTBFS under GCC 4.0 caused by inconsistent use of "static" on
  functions. (Closes: #295110.)
* Add a watch file, now that we can. (Upstream's layout needs version=3.)

2. By Aaron M. Ucko

Whoops, ncbi-data should replace pre-split versions of ncbi-tools6.

1. By Aaron M. Ucko

Import upstream version 6.1.20011220a

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