lp:debian/mummer
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- bzr branch lp:debian/mummer
Branch information
- Owner:
- Ubuntu branches
- Status:
- Development
Recent revisions
- 8. By Andreas Tille
-
* Moved debian/upstream to debian/
upstream/ metadata
* Add some patches from mugsy enhancing functionality by adding two tools
* Add some patches from mugsy to include delta-filter -b for reporting
duplications
* cme fix dpkg-control
* Remove SF privacy breach script from docs
* Fix manpage syntax and add missing manpage
* Propagate hardening options - 7. By Andreas Tille
-
* debian/
enable_ building_ with_tetex. patch: enable building with recent
tetex by changing the layout slightly (s/a4wide/a4/)
Closes: #669521
* debian/control: Standards-Version: 3.9.3 (no changes needed)
* Debhelper 9 (control+compat) - 6. By Charles Plessy
-
* New upstream release adding -D and --banded option to nucmer.
* Updated debian/patches/ 02at_docs_ web.diff.
* Corrected VCS URLs (debian/control).
* Conforms to Policy 3.9.2 (debian/control, no other changes needed).
* Using Debhelper 8 (debian/control, debian/compat).
* Support DEB_BUILD_OPTIONS via Debhelper (debian/rules).
* Use dpkg source format 3.0 (quilt) as a patch system (debian/rules,
debian/control, debian/source/ format) .
* Simplify debian/rules using dh.
* Pass Dpkg build flags in CFLAGS (debian/rules). - 5. By Andreas Tille
-
[ Andreas Tille ]
* Make sure scripts will use the installation path instead of
the temporary build path
Closes: #575105
* Make real use of debian/sh-replacement- scripts and drop csh
(build-)dependency
* incremented Standards-Version to reflect concordance with Debian Policy
3.8.4 (no changes needed).
* install tandem-repeat.awk which was lacking from installation
previousely[ Charles Plessy ]
* Updated upstream-metadata. yaml to use simple key=value form
instead of BibTeX entry - 4. By Charles Plessy
-
* New upstream release:
3.22
- Significant 'dnadiff' bug fixes.
- Unaligned contig output format switched to match show-diff format.
- Dynamic memory allocation for run-mummer1.
- Turned off output of the near useless .cluster files from nucmer and
promer (let us know if you still want them).
3.21
- gcc compatibility fix.
* debian/get-orig- source: rename mutilated upstream tarball.
* debian/control:
- incremented Standards-Version to reflect concordance with Debian Policy
3.8.3 (no changes needed).
- mummer-docs depends on ${misc:Depends}.
- dropped versionned dependencies when they are even satisfied in oldstable.
- dropped dependency on CDBS and patchutils, and added dependency on quilt.
- using Debhelper 7 (debian/compat).
- build-depend on csh for correct interpreter path detection.
* debian/patches:
- replaces some Makefile patches by environment variables in debian/rules.
- replaced 02at_scripts.diff by separate files in sh-replacement-scripts.
- added a series file to use Quilt.
- dropped the patch ‘01sm_src_tigr.diff’ that allowed to use MUMmer on
computers with less that 512 Mo of memory and is now obsoleted by
this release.
- refreshed the 02at_docs_web.diff patch that redirects the links for the
suppressed PDF files to the upstream website.
* debian/rules converted to debhelper (the build system is too odd to be
handled gently by CDBS without patches).
* Mangled ‘~dfsg’ from the Debian version number in debian/watch.
* Converted debian/copyright to a machine-readable format.
* Documented the PDF deletion and the patching in ‘debian/README. source’ .
* Turned the get-orig-source shell script into a debian/rule target.
* Added an experimental collection of upstream metadata in YAML format
(debian/upstream- metadata. yaml). - 3. By Charles Plessy
-
* Changed the doc-base section according to the new policy.
* Added myself to the `Uploaders' field in `debian/control'.
* Removed `debian/mummer. dirs', that was only creating empty directories. - 2. By Andreas Tille
-
* Initial Release (Closes: Bug#201761).
Thanks to Steffen Moeller <email address hidden> who
prepared a package for version 3.17 and just some
cleanups were left.
* New Standards-Version (no changes needed)
* Switched to cdbs to simplify handling of patches
* debian/compat: 5
Branch metadata
- Branch format:
- Branch format 7
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- Bazaar repository format 2a (needs bzr 1.16 or later)
- Stacked on:
- lp:debian/squeeze/mummer