lp:debian/jessie/apbs

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8. By Debichem Team <email address hidden>

* New upstream release.

[ Daniel Leidert ]
* debian/control (Uploaders): Removed myself.
  (Standards-Version): Bumped to 3.9.4.
  (Vcs-Browser, Vcs-Svn): Fixed vcs-field-not-canonical.
  (DM-Upload-Allowed): Dropped.
  (Build-Depends): Dropped all autotools related build dependencies,
  libarpack2-dev, libblas-dev and bc. Added cmake, libpython-dev
  and zlib1g-dev.
* debian/copyright: Updated.
* debian/rules: Enable hardening. Dropped all autotools related stuff and
  rewrote it for cmake build system.
* debian/watch: Make regex case insensitive.
* debian/patches/03_skip_expensive_tests.patch: Dropped. Upstream changed
  to cmake.
* debian/patches/06_quicktest.patch: Ditto.
* debian/patches/07_destdir.patch: Ditto.
* debian/patches/08_distclean.patch: Ditto.
* debian/patches/09_acinclude_fix.patch: Ditto.
* debian/patches/debian_make.patch: Added.
  - Compile internal libraries statically into apbs.
* debian/patches/debian_testfiles.patch: Added.
  - Skip expensive tests (see 03_skip_expensive_tests.patch).
* debian/patches/series: Adjusted.

[ Andreas Tille ]
* debian/upstream: Author field in BibTeX syntax

7. By Daniel Leidert

* debian/apbs.install: Adjusted.
* debian/apbs.manpages: Added to fix binary-without-manpage.
* debian/compat: Increased dh level to 7.
* debian/control: Used wrap-and-sort.
  (Standards-Version): Bumped to recent 3.9.3.
  (Build-Depends): Removed unused cdbs. Added autotools-dev version
  requirements. Lowered required debhelper version.
  (Vcs-Browser): Fixed.
* debian/copyright: Updated. Removed BSD license file reference to fix
  copyright-refers-to-deprecated-bsd-license-file.
* debian/rules: Run autotools_dev template. Added override target for
  dh_install. Added target to install upstream changelog file.
* debian/upstream: Added.
* debian/README.source: Dropped obsolete file.
* debian/patches/*.patch: Updated for quilt.
* debian/patches/04_remove_install-exec-am_rule.patch: Dropped. Moved
  patch content to 07_destdir.patch.
* debian/patches/series: Adjusted.

6. By Michael Banck

* New upstream release.

[ Daniel Leidert (dale) ]
* debian/rules (DEB_CONFIGURE_EXTRA_FLAGS): Don't build nor link against
  shipped copy of zlib.

[ Michael Banck ]
* Switch packaging to "3.0 (quilt)" format.
* debian/rules: Rewritten for dh.
* debian/control (Build-Depends): Removed quilt, bumped required debhelper
  version to 8.
* debian/apbs.install: Install apbs executable explicitly.
* debian/patches/07_destdir.patch: New patch, fixes DESTDIR in python
  setup.py installation in a contributed module.
* debian/control (Build-Depends): Added dh-autoreconf, autoconf and
  automake.
* debian/rules: Use --with autoreconf.
* debian/rules (override_dh_auto_clean): Run make distclean in examples
  directory and remove all uncleaned Makefiles.
* debian/patches/08_distclean.patch: New patch, fixes Makefile.am in various
  directories to clean all relevant files on make distclean.
* debian/patches/09_acinclude_fix.patch: New patches, rewrites some m4
  macros so that recent autoconf versions do not produce faulty shell code,
  taken from Gentoo.
* debian/control (Build-Depends): Added python-setuptools.

5. By Daniel Leidert

* New upstream (bugfix) release.

* debian/control (Standards-Version): Bumped to 3.8.3.
  (Build-Depends): Replace libmpich1.0-dev with mpi-default-dev.
* debian/rules: Added list-missing target.
  (DEB_CONFIGURE_EXTRA_FLAGS, DEB_CONFIGURE_SCRIPT_ENV): Use the default
  MPI implementation for the architecture.
* debian/watch: Slightly adjusted for upstream version schema.

4. By Daniel Leidert

* New upstream release.

* debian/apbs.1: Added citation section.
  (SEE ALSO): User guide is not available locally anymore.
* debian/apbs.doc-base,
  debian/apbs.dirs: Dropped useless files.
* debian/apbs.install: Removed documentation files, because the user guide
  is not shipped anymore (closes: #508980). The lintian overrides are
  considered by dh_lintian.
* debian/control (Uploaders): Removed LI as requested. Thanks for your work!
  (Build-Depends): Re-added arpack, which is back in main.
  (Standards-Version): Bumped to 3.8.2 (no other changes).
  (Vcs-Svn): Fixed vcs-field-uses-not-recommended-uri-format.
* debian/copyright: Updated and completed.
* debian/rules (DEB_CONFIGURE_EXTRA_FLAGS): Build with arpack.
* debian/README.source: Added to comply to policy.
* debian/lintian-overrides/apbs: Dropped. License file is not installed
  anymore.
* debian/patches/01_html_documentation.dpatch: Dropped, as there is no
  documentation installed anymore.
* debian/patches/04_remove_install-exec-am_rule.dpatch: Updated/adjusted.
* debian/patches/05_reduce_test_suite.dpatch: Dropped (cannot be applied
  anymore).
* debian/patches/00list: Adjusted.

3. By Michael Banck

* debian/patches/06_quicktest.dpatch: New patch, add a `quicktest' target
  which only runs a couple of small tests.
* debian/rules (DEB_MAKE_CHECK_TARGET): Run quicktest instead of test for
  now.
* debian/control (Build-Depends): Removed libarpack2-dev. (closes: #497722)
* debian/rules (DEB_CONFIGURE_EXTRA_FLAGS): Removed --with-arpack.

2. By Michael Banck

* debian/patches: New directory, manage changes to upstream with
  simple-patchsys.mk.
* debian/patches/01_html_docu.patch: New patch, supress link to the
  programmer's manual we don't ship for now.
* debian/patches/02_remove_vf2c.patch: New patch, remove MALOC's own
  -lvf2c f2c fork from linking.
* debian/patches/90_autoreconf.patch: Update libtool; closes: #378211.

1. By Michael Banck

Import upstream version 0.4.0

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