lp:debian/experimental/ncbi-tools6
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Branch information
- Owner:
- Ubuntu branches
- Status:
- Development
Recent revisions
- 7. By Aaron M. Ucko
-
* New upstream release; the upgrade to BLAST 2.2.24 (from 2.2.21) should
address a formatdb regression. (LP: #586219.)
* Uploading to experimental because squeeze is frozen.
* debian/rules
- Clean up compilation settings; in particular, use dpkg-buildflags rather
than relying on dpkg-buildpackage to have set CFLAGS appropriately.
- (clean): restore expected empty directories if necessary,
for compatibility with VCSes (notably git) that don't track them.
- (install-indep-stamp) : adapt to new ncbilogo.ico contents.
- (VIB): add asndisc, as upstream takes care to publish binaries thereof.
* debian/ncbi-tools6. install: likewise add asndisc.
* (debian/).gitignore: Ignore content generated during build.
* debian/lib{ncbi6, vibrant6a} .symbols: update for latest release.
* make/makenet.unx: don't link asndisc against extraneous libraries.
* doc/man/*.1: update for latest release.
* doc/man/asndisc.1: throw together a man page for asndisc.
* doc/man/cleanasn.1: fix SEE ALSO formatting.
* debian/control:
- bump dpkg-dev build-dep to >= 1.15.7 for dpkg-buildflags.
- Standards-Version: 3.9.1 (already compliant).
- note switch to git-mediated Debian-Med team maintenance. - 6. By Aaron M. Ucko
-
* debian/control: per Lintian's advice, depend on ${misc:Depends} across
the board, in case Debhelper ever populates it.
* debian/{control, rules}: split newly added large BLAST databases into a
new ncbi-rrna-data package to keep ncbi-data to a reasonable size. - 5. By Aaron M. Ucko
-
tools/readdb.c: enable madvise()-based code on all glibc (hence all
Debian) systems, not just Linux. (Closes: #490437.) - 4. By Aaron M. Ucko
-
* New upstream release.
* Don't bother linking against indirectly used system libraries.
* Update man pages. - 3. By Aaron M. Ucko
-
* Fix FTBFS under GCC 4.0 caused by inconsistent use of "static" on
functions. (Closes: #295110.)
* Add a watch file, now that we can. (Upstream's layout needs version=3.)
Branch metadata
- Branch format:
- Branch format 7
- Repository format:
- Bazaar repository format 2a (needs bzr 1.16 or later)
- Stacked on:
- lp:debian/squeeze/ncbi-tools6