Merge lp:~rockclimb/gephi/sourcebase-tidy into lp:~gephi.team/gephi/0.8

[Andrew Ross]

I've been through and added license headers to those files which were missing them, and fixed mis-worded license headers.

I've also removed the following unreferences jar files:
* JFreeChart/release/modules/ext/orson-0.5.0.jar
* ProcessingWrapper/release/modules/ext/opengl.jar
* DesktopTools/release/modules/ext/beansbinding-1.2.1.jar
* Utils/release/modules/ext/javacsv.jar

For the last two, there is another copy that actually gets used in BeansBindingWrapper and JavaCSVWrapper respectively.

I also removed the following jar file, and its reference in SwingX/nbproject/project.xml since a newer version of the classes are in the swingx jar files anyway (and those jar files have a proper license and source code available):
* SwingX/release/modules/ext/MultipleGradientPaint.jar

[Mathieu Bastian (mathieu.bastian)]

Very good job, our source code gets cleaner :-)

review: Approve

=== modified file 'AttributesAPI/test/unit/src/org/gephi/data/attributes/type/IntegerListTest.java'
--- AttributesAPI/test/unit/src/org/gephi/data/attributes/type/IntegerListTest.java	2010-05-27 21:47:09 +0000
+++ AttributesAPI/test/unit/src/org/gephi/data/attributes/type/IntegerListTest.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,24 @@
+/*
+Copyright 2008-2010 Gephi
+Authors : Martin Škurla
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.data.attributes.type;
 
 import org.junit.Test;
@@ -43,4 +64,4 @@
         IntegerList list = new IntegerList(new Integer [0]);
         assertEquals(list.size(), 0);
     }
-}
\ No newline at end of file
+}

=== modified file 'AttributesAPI/test/unit/src/org/gephi/data/attributes/type/StringListTest.java'
--- AttributesAPI/test/unit/src/org/gephi/data/attributes/type/StringListTest.java	2010-05-27 21:47:09 +0000
+++ AttributesAPI/test/unit/src/org/gephi/data/attributes/type/StringListTest.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,24 @@
+/*
+Copyright 2008-2010 Gephi
+Authors : Martin Škurla
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.data.attributes.type;
 
 import org.junit.Test;
@@ -43,4 +64,4 @@
         StringList list = new StringList(new char[0]);
         assertEquals(list.size(), 0);
     }
-}
\ No newline at end of file
+}

=== modified file 'AttributesAPI/test/unit/src/org/gephi/data/attributes/type/TypeConvertorTest.java'
--- AttributesAPI/test/unit/src/org/gephi/data/attributes/type/TypeConvertorTest.java	2010-05-27 21:47:09 +0000
+++ AttributesAPI/test/unit/src/org/gephi/data/attributes/type/TypeConvertorTest.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,24 @@
+/*
+Copyright 2008-2010 Gephi
+Authors : Martin Škurla
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.data.attributes.type;
 
 import java.math.BigInteger;
@@ -68,4 +89,4 @@
     public void testConvertingPrimitiveToWrapperArrayArgumentNotPrimitiveArray() {
         TypeConvertor.convertPrimitiveToWrapperArray(new Object[0]);
     }
-}
\ No newline at end of file
+}

=== modified file 'AttributesImpl/src/org/gephi/data/attributes/ListFactory.java'
--- AttributesImpl/src/org/gephi/data/attributes/ListFactory.java	2010-07-07 23:29:28 +0000
+++ AttributesImpl/src/org/gephi/data/attributes/ListFactory.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,24 @@
+/*
+Copyright 2008-2010 Gephi
+Authors : Martin Škurla
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.data.attributes;
 
 import java.math.BigDecimal;

=== modified file 'DataLaboratoryPlugin/src/org/gephi/datalab/plugin/manipulators/general/ui/ImportCSVUIWizardPanel1.java'
--- DataLaboratoryPlugin/src/org/gephi/datalab/plugin/manipulators/general/ui/ImportCSVUIWizardPanel1.java	2010-09-07 09:00:13 +0000
+++ DataLaboratoryPlugin/src/org/gephi/datalab/plugin/manipulators/general/ui/ImportCSVUIWizardPanel1.java	2011-04-10 10:41:30 +0000
@@ -1,7 +1,23 @@
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Copyright 2008-2010 Gephi
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.datalab.plugin.manipulators.general.ui;
 
 import java.awt.Component;

=== modified file 'DesktopDataLaboratory/src/org/gephi/desktop/datalab/general/actions/AddColumnUI.java'
--- DesktopDataLaboratory/src/org/gephi/desktop/datalab/general/actions/AddColumnUI.java	2010-09-07 09:00:13 +0000
+++ DesktopDataLaboratory/src/org/gephi/desktop/datalab/general/actions/AddColumnUI.java	2011-04-10 10:41:30 +0000
@@ -8,7 +8,7 @@
 Gephi is free software: you can redistribute it and/or modify
 it under the terms of the GNU Affero General Public License as
 published by the Free Software Foundation, either version 3 of the
-(at your option) any later version.
+License, or (at your option) any later version.
 
 Gephi is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of

=== modified file 'DesktopDataLaboratory/src/org/gephi/desktop/datalab/general/actions/CSVExportUI.java'
--- DesktopDataLaboratory/src/org/gephi/desktop/datalab/general/actions/CSVExportUI.java	2010-12-28 12:29:32 +0000
+++ DesktopDataLaboratory/src/org/gephi/desktop/datalab/general/actions/CSVExportUI.java	2011-04-10 10:41:30 +0000
@@ -8,7 +8,7 @@
 Gephi is free software: you can redistribute it and/or modify
 it under the terms of the GNU Affero General Public License as
 published by the Free Software Foundation, either version 3 of the
-(at your option) any later version.
+License, or (at your option) any later version.
 
 Gephi is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
@@ -17,7 +17,7 @@
 
 You should have received a copy of the GNU Affero General Public License
 along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
- */
+*/
 package org.gephi.desktop.datalab.general.actions;
 
 import java.nio.charset.Charset;

=== modified file 'DesktopDataLaboratory/src/org/gephi/desktop/datalab/general/actions/MergeColumnsUI.java'
--- DesktopDataLaboratory/src/org/gephi/desktop/datalab/general/actions/MergeColumnsUI.java	2011-02-18 14:56:02 +0000
+++ DesktopDataLaboratory/src/org/gephi/desktop/datalab/general/actions/MergeColumnsUI.java	2011-04-10 10:41:30 +0000
@@ -8,7 +8,7 @@
 Gephi is free software: you can redistribute it and/or modify
 it under the terms of the GNU Affero General Public License as
 published by the Free Software Foundation, either version 3 of the
-(at your option) any later version.
+License, or (at your option) any later version.
 
 Gephi is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of

=== modified file 'DesktopDataLaboratory/src/org/gephi/desktop/datalab/utils/PopupMenuUtils.java'
--- DesktopDataLaboratory/src/org/gephi/desktop/datalab/utils/PopupMenuUtils.java	2011-02-09 20:31:01 +0000
+++ DesktopDataLaboratory/src/org/gephi/desktop/datalab/utils/PopupMenuUtils.java	2011-04-10 10:41:30 +0000
@@ -8,7 +8,7 @@
 Gephi is free software: you can redistribute it and/or modify
 it under the terms of the GNU Affero General Public License as
 published by the Free Software Foundation, either version 3 of the
-(at your option) any later version.
+License, or (at your option) any later version.
 
 Gephi is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of

=== modified file 'DesktopDataLaboratory/src/org/gephi/desktop/datalab/utils/SparkLinesRenderer.java'
--- DesktopDataLaboratory/src/org/gephi/desktop/datalab/utils/SparkLinesRenderer.java	2010-09-13 17:15:02 +0000
+++ DesktopDataLaboratory/src/org/gephi/desktop/datalab/utils/SparkLinesRenderer.java	2011-04-10 10:41:30 +0000
@@ -8,7 +8,7 @@
 Gephi is free software: you can redistribute it and/or modify
 it under the terms of the GNU Affero General Public License as
 published by the Free Software Foundation, either version 3 of the
-(at your option) any later version.
+License, or (at your option) any later version.
 
 Gephi is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of

=== modified file 'DesktopDataLaboratory/src/org/gephi/desktop/datalab/utils/TimeIntervalsRenderer.java'
--- DesktopDataLaboratory/src/org/gephi/desktop/datalab/utils/TimeIntervalsRenderer.java	2010-09-13 17:15:02 +0000
+++ DesktopDataLaboratory/src/org/gephi/desktop/datalab/utils/TimeIntervalsRenderer.java	2011-04-10 10:41:30 +0000
@@ -8,7 +8,7 @@
 Gephi is free software: you can redistribute it and/or modify
 it under the terms of the GNU Affero General Public License as
 published by the Free Software Foundation, either version 3 of the
-(at your option) any later version.
+License, or (at your option) any later version.
 
 Gephi is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of

=== modified file 'DesktopExport/src/org/gephi/desktop/io/export/api/TopDialog.java'
--- DesktopExport/src/org/gephi/desktop/io/export/api/TopDialog.java	2011-04-06 03:59:06 +0000
+++ DesktopExport/src/org/gephi/desktop/io/export/api/TopDialog.java	2011-04-10 10:41:30 +0000
@@ -1,7 +1,24 @@
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Copyright 2008-2010 Gephi
+Authors : Mathieu Bastian <[e-mail]>
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.desktop.io.export.api;
 
 import java.awt.BorderLayout;

=== modified file 'DesktopPreview/src/org/gephi/desktop/preview/PreviewNode.java'
--- DesktopPreview/src/org/gephi/desktop/preview/PreviewNode.java	2010-12-20 02:20:53 +0000
+++ DesktopPreview/src/org/gephi/desktop/preview/PreviewNode.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,24 @@
+/*
+Copyright 2008-2010 Gephi
+Authors : Jérémy Subtil <[e-mail]>
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.desktop.preview;
 
 import org.gephi.preview.api.PreviewController;

=== modified file 'DesktopPreview/src/org/gephi/desktop/preview/PreviewSettingsTopComponent.java'
--- DesktopPreview/src/org/gephi/desktop/preview/PreviewSettingsTopComponent.java	2010-09-30 19:52:30 +0000
+++ DesktopPreview/src/org/gephi/desktop/preview/PreviewSettingsTopComponent.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,23 @@
+/*
+Copyright 2008-2010 Gephi
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.desktop.preview;
 
 import java.awt.BorderLayout;

=== modified file 'DesktopPreview/src/org/gephi/desktop/preview/PreviewTopComponent.java'
--- DesktopPreview/src/org/gephi/desktop/preview/PreviewTopComponent.java	2011-04-07 06:11:23 +0000
+++ DesktopPreview/src/org/gephi/desktop/preview/PreviewTopComponent.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,23 @@
+/*
+Copyright 2008-2010 Gephi
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.desktop.preview;
 
 import java.awt.BorderLayout;

=== modified file 'DesktopPreview/src/org/gephi/desktop/preview/PreviewUIController.java'
--- DesktopPreview/src/org/gephi/desktop/preview/PreviewUIController.java	2010-10-08 16:01:26 +0000
+++ DesktopPreview/src/org/gephi/desktop/preview/PreviewUIController.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,24 @@
+/*
+Copyright 2008-2010 Gephi
+Authors : Jérémy Subtil <[e-mail]>
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.desktop.preview;
 
 import javax.swing.SwingUtilities;

=== modified file 'DesktopPreview/src/org/gephi/desktop/preview/ProcessingPreview.java'
--- DesktopPreview/src/org/gephi/desktop/preview/ProcessingPreview.java	2011-04-07 06:11:23 +0000
+++ DesktopPreview/src/org/gephi/desktop/preview/ProcessingPreview.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,24 @@
+/*
+Copyright 2008-2010 Gephi
+Authors : Jérémy Subtil <[e-mail]>
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.desktop.preview;
 
 import java.awt.Font;

=== removed file 'DesktopTools/release/modules/ext/beansbinding-1.2.1.jar'
Binary files DesktopTools/release/modules/ext/beansbinding-1.2.1.jar	2009-09-23 10:28:52 +0000 and DesktopTools/release/modules/ext/beansbinding-1.2.1.jar	1970-01-01 00:00:00 +0000 differ
=== modified file 'DirectoryChooser/src/org/netbeans/swing/dirchooser/spi/CustomDirectoryProvider.java'
--- DirectoryChooser/src/org/netbeans/swing/dirchooser/spi/CustomDirectoryProvider.java	2010-10-21 15:16:36 +0000
+++ DirectoryChooser/src/org/netbeans/swing/dirchooser/spi/CustomDirectoryProvider.java	2011-04-10 10:41:30 +0000
@@ -1,10 +1,29 @@
+/*
+Copyright 2008-2010 Gephi
+Authors : Martin Škurla
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.netbeans.swing.dirchooser.spi;
 
-
 import java.io.File;
 import javax.swing.Icon;
 
-
 /**
  * Defines icon and required file content of custom directory. Custom directory is invoked always as
  * the result of <code>jFileChooser.setFileSelectionMode(JFileChooser.DIRECTORIES_ONLY);</code>. As

=== modified file 'DynamicImpl/test/unit/src/org/gephi/dynamic/DynamicModeltest.java'
--- DynamicImpl/test/unit/src/org/gephi/dynamic/DynamicModeltest.java	2010-09-22 20:46:09 +0000
+++ DynamicImpl/test/unit/src/org/gephi/dynamic/DynamicModeltest.java	2011-04-10 10:41:30 +0000
@@ -1,4 +1,25 @@
 /*
+Copyright 2008-2010 Gephi
+Authors : Mathieu Bastian <[e-mail]>
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
+/*
  * To change this template, choose Tools | Templates
  * and open the template in the editor.
  */

=== modified file 'FiltersPlugin/src/org/gephi/filters/plugin/DynamicAttributesHelper.java'
--- FiltersPlugin/src/org/gephi/filters/plugin/DynamicAttributesHelper.java	2011-03-17 07:35:27 +0000
+++ FiltersPlugin/src/org/gephi/filters/plugin/DynamicAttributesHelper.java	2011-04-10 10:41:30 +0000
@@ -1,7 +1,24 @@
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Copyright 2008-2010 Gephi
+Authors : Mathieu Bastian <[e-mail]>
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.filters.plugin;
 
 import org.gephi.data.attributes.api.Estimator;

=== modified file 'FiltersPlugin/src/org/gephi/filters/plugin/attribute/ComparableArrayConverter.java'
--- FiltersPlugin/src/org/gephi/filters/plugin/attribute/ComparableArrayConverter.java	2010-07-15 17:11:39 +0000
+++ FiltersPlugin/src/org/gephi/filters/plugin/attribute/ComparableArrayConverter.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,23 @@
+/*
+Copyright 2008-2010 Gephi
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.filters.plugin.attribute;
 
 

=== modified file 'ImportPlugin/test/unit/src/org/gephi/io/importer/plugin/database/EdgeListImporterTest.java'
--- ImportPlugin/test/unit/src/org/gephi/io/importer/plugin/database/EdgeListImporterTest.java	2010-06-09 22:33:02 +0000
+++ ImportPlugin/test/unit/src/org/gephi/io/importer/plugin/database/EdgeListImporterTest.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,24 @@
+/*
+Copyright 2008-2010 Gephi
+Authors : Mathieu Bastian <[e-mail]>
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.io.importer.plugin.database;
 
 import java.sql.Connection;

=== removed file 'JFreeChart/release/modules/ext/orson-0.5.0.jar'
Binary files JFreeChart/release/modules/ext/orson-0.5.0.jar	2009-09-27 13:11:36 +0000 and JFreeChart/release/modules/ext/orson-0.5.0.jar	1970-01-01 00:00:00 +0000 differ
=== modified file 'PreviewExport/src/org/gephi/io/exporter/preview/util/LengthUnit.java'
--- PreviewExport/src/org/gephi/io/exporter/preview/util/LengthUnit.java	2010-08-29 17:57:57 +0000
+++ PreviewExport/src/org/gephi/io/exporter/preview/util/LengthUnit.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,24 @@
+/*
+Copyright 2008-2010 Gephi
+Authors : Jérémy Subtil <[e-mail]>
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.io.exporter.preview.util;
 
 /**

=== modified file 'PreviewExport/src/org/gephi/io/exporter/preview/util/SupportSize.java'
--- PreviewExport/src/org/gephi/io/exporter/preview/util/SupportSize.java	2010-08-29 17:57:57 +0000
+++ PreviewExport/src/org/gephi/io/exporter/preview/util/SupportSize.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,24 @@
+/*
+Copyright 2008-2010 Gephi
+Authors : Jérémy Subtil <[e-mail]>
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.io.exporter.preview.util;
 
 /**

=== removed file 'ProcessingWrapper/release/modules/ext/opengl.jar'
Binary files ProcessingWrapper/release/modules/ext/opengl.jar	2009-11-03 21:59:39 +0000 and ProcessingWrapper/release/modules/ext/opengl.jar	1970-01-01 00:00:00 +0000 differ
=== modified file 'RankingAPI/src/org/gephi/ranking/impl/AbstractTransformer.java'
--- RankingAPI/src/org/gephi/ranking/impl/AbstractTransformer.java	2010-02-07 09:09:49 +0000
+++ RankingAPI/src/org/gephi/ranking/impl/AbstractTransformer.java	2011-04-10 10:41:30 +0000
@@ -1,23 +1,24 @@
 /*
-CopyrighType 2008 WebAtlas
+Copyright 2008 WebAtlas
 Authors : Mathieu Bastian, Mathieu Jacomy, Julian Bilcke
 Website : http://www.gephi.org
 
-This file is parType of Gephi.
-
-Gephi is free software: you can redistribute iType and/or modify
-iType under the terms of the GNU General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(aType your option) any later version.
-
-Gephi is distributed in the hope thaType iType will be useful,
-buType WITHOUType ANY WARRANTY; withouType even the implied warranty of
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
+GNU Affero General Public License for more details.
 
-You should have received a copy of the GNU General Public License
+You should have received a copy of the GNU Affero General Public License
 along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
- */
+*/
+
 package org.gephi.ranking.impl;
 
 import org.gephi.ranking.api.Interpolator;

=== modified file 'StatisticsAPI/test/unit/src/org/gephi/statistics/StatisticsPersistenceProviderTest.java'
--- StatisticsAPI/test/unit/src/org/gephi/statistics/StatisticsPersistenceProviderTest.java	2011-02-20 21:46:29 +0000
+++ StatisticsAPI/test/unit/src/org/gephi/statistics/StatisticsPersistenceProviderTest.java	2011-04-10 10:41:30 +0000
@@ -1,7 +1,24 @@
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Copyright 2008-2010 Gephi
+Authors : Mathieu Bastian <[e-mail]>
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.statistics;
 
 import java.io.StringReader;

=== modified file 'SwingX/nbproject/project.xml'
--- SwingX/nbproject/project.xml	2010-09-01 22:24:24 +0000
+++ SwingX/nbproject/project.xml	2011-04-10 10:41:30 +0000
@@ -60,10 +60,6 @@
                 <runtime-relative-path>ext/swingx-beaninfo-1.6.1.jar</runtime-relative-path>
                 <binary-origin>release/modules/ext/swingx-beaninfo-1.6.1.jar</binary-origin>
             </class-path-extension>
-            <class-path-extension>
-                <runtime-relative-path>ext/MultipleGradientPaint.jar</runtime-relative-path>
-                <binary-origin>release/modules/ext/MultipleGradientPaint.jar</binary-origin>
-            </class-path-extension>
         </data>
     </configuration>
 </project>

=== removed file 'SwingX/release/modules/ext/MultipleGradientPaint.jar'
Binary files SwingX/release/modules/ext/MultipleGradientPaint.jar	2009-06-26 15:45:50 +0000 and SwingX/release/modules/ext/MultipleGradientPaint.jar	1970-01-01 00:00:00 +0000 differ
=== removed file 'Utils/release/modules/ext/javacsv.jar'
Binary files Utils/release/modules/ext/javacsv.jar	2010-08-02 18:06:19 +0000 and Utils/release/modules/ext/javacsv.jar	1970-01-01 00:00:00 +0000 differ
=== modified file 'Utils/test/unit/src/org/gephi/utils/StatisticsUtilsTest.java'
--- Utils/test/unit/src/org/gephi/utils/StatisticsUtilsTest.java	2010-08-23 14:20:55 +0000
+++ Utils/test/unit/src/org/gephi/utils/StatisticsUtilsTest.java	2011-04-10 10:41:30 +0000
@@ -10,7 +10,7 @@
 Gephi is free software: you can redistribute it and/or modify
 it under the terms of the GNU Affero General Public License as
 published by the Free Software Foundation, either version 3 of the
-(at your option) any later version.
+License, or (at your option) any later version.
 
 Gephi is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
@@ -92,4 +92,4 @@
         assertEquals(results[6], new BigDecimal("1"));
         assertEquals(results[7], new BigDecimal("7"));
     }
-}
\ No newline at end of file
+}

=== modified file 'VisualizationModule/src/org/gephi/visualization/apiimpl/contextmenuitems/CopyToWorkspace.java'
--- VisualizationModule/src/org/gephi/visualization/apiimpl/contextmenuitems/CopyToWorkspace.java	2011-01-15 18:15:35 +0000
+++ VisualizationModule/src/org/gephi/visualization/apiimpl/contextmenuitems/CopyToWorkspace.java	2011-04-10 10:41:30 +0000
@@ -1,7 +1,23 @@
 /*
- * To change this template, choose Tools | Templates
- * and open the template in the editor.
- */
+Copyright 2008-2010 Gephi
+Authors : Eduardo Ramos <[e-mail]>
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
 
 package org.gephi.visualization.apiimpl.contextmenuitems;
 

=== modified file 'VisualizationModule/src/org/gephi/visualization/swing/GLAbstractListener.java'
--- VisualizationModule/src/org/gephi/visualization/swing/GLAbstractListener.java	2011-03-12 22:56:17 +0000
+++ VisualizationModule/src/org/gephi/visualization/swing/GLAbstractListener.java	2011-04-10 10:41:30 +0000
@@ -1,3 +1,24 @@
+/*
+Copyright 2008-2010 Gephi
+Authors : Mathieu Bastian <[e-mail]>
+Website : http://www.gephi.org
+
+This file is part of Gephi.
+
+Gephi is free software: you can redistribute it and/or modify
+it under the terms of the GNU Affero General Public License as
+published by the Free Software Foundation, either version 3 of the
+License, or (at your option) any later version.
+
+Gephi is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU Affero General Public License for more details.
+
+You should have received a copy of the GNU Affero General Public License
+along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
 package org.gephi.visualization.swing;
 
 import com.sun.opengl.util.BufferUtil;

=== modified file 'change_license.sh'
--- change_license.sh	2011-04-05 11:44:27 +0000
+++ change_license.sh	2011-04-10 10:41:30 +0000
@@ -1,5 +1,24 @@
 #!/bin/bash
 
+#  Copyright 2008-2010 Gephi
+#  Website : http://www.gephi.org
+#
+# This file is part of Gephi.
+#
+# Gephi is free software: you can redistribute it and/or modify
+# it under the terms of the GNU Affero General Public License as
+# published by the Free Software Foundation, either version 3 of the
+# License, or (at your option) any later version.
+#
+# Gephi is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU Affero General Public License for more details.
+#
+# You should have received a copy of the GNU Affero General Public License
+# along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+
+
 # 
 # Edit all project.properties contained in modules.
 # 

=== modified file 'copykeystore.py'
--- copykeystore.py	2011-04-05 11:44:27 +0000
+++ copykeystore.py	2011-04-10 10:41:30 +0000
@@ -1,3 +1,21 @@
+#  Copyright 2008-2010 Gephi
+#  Website : http://www.gephi.org
+#
+# This file is part of Gephi.
+#
+# Gephi is free software: you can redistribute it and/or modify
+# it under the terms of the GNU Affero General Public License as
+# published by the Free Software Foundation, either version 3 of the
+# License, or (at your option) any later version.
+#
+# Gephi is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU Affero General Public License for more details.
+#
+# You should have received a copy of the GNU Affero General Public License
+# along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+
 import os.path
 import sys
 
@@ -28,4 +46,4 @@
             f = open(private_dir + "/private.properties", 'w')
             f.write("storepass=" + passphrase)
             f.close()
-project.close()
\ No newline at end of file
+project.close()

=== modified file 'po2properties.sh'
--- po2properties.sh	2011-04-05 11:44:27 +0000
+++ po2properties.sh	2011-04-10 10:41:30 +0000
@@ -1,4 +1,23 @@
 #!/bin/bash
+
+#  Copyright 2008-2010 Gephi
+#  Website : http://www.gephi.org
+#
+# This file is part of Gephi.
+#
+# Gephi is free software: you can redistribute it and/or modify
+# it under the terms of the GNU Affero General Public License as
+# published by the Free Software Foundation, either version 3 of the
+# License, or (at your option) any later version.
+#
+# Gephi is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU Affero General Public License for more details.
+#
+# You should have received a copy of the GNU Affero General Public License
+# along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+
 ROOT=`pwd`
 
 function RecurseDirs

=== modified file 'properties2pot.sh'
--- properties2pot.sh	2011-04-05 11:44:27 +0000
+++ properties2pot.sh	2011-04-10 10:41:30 +0000
@@ -1,4 +1,23 @@
 #!/bin/bash
+
+#  Copyright 2008-2010 Gephi
+#  Website : http://www.gephi.org
+#
+# This file is part of Gephi.
+#
+# Gephi is free software: you can redistribute it and/or modify
+# it under the terms of the GNU Affero General Public License as
+# published by the Free Software Foundation, either version 3 of the
+# License, or (at your option) any later version.
+#
+# Gephi is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU Affero General Public License for more details.
+#
+# You should have received a copy of the GNU Affero General Public License
+# along with Gephi.  If not, see <http://www.gnu.org/licenses/>.
+
 ROOT=`pwd`
 
 function RecurseDirs