lp:bamtools

Created by Michael R. Crusoe and last modified
Get this branch:
bzr branch lp:bamtools

Branch merges

Related bugs

Related blueprints

Branch information

Owner:
Michael R. Crusoe
Project:
BamTools
Status:
Development

Import details

Import Status: Reviewed

This branch is an import of the HEAD branch of the Git repository at git://github.com/pezmaster31/bamtools.git.

The next import is scheduled to run .

Last successful import was .

Import started on alnitak and finished taking 10 seconds — see the log
Import started on izar and finished taking 5 seconds — see the log
Import started on alnitak and finished taking 10 seconds — see the log
Import started on alnitak and finished taking 10 seconds — see the log
Import started on izar and finished taking 5 seconds — see the log
Import started on alnitak and finished taking 10 seconds — see the log
Import started on izar and finished taking 5 seconds — see the log
Import started on izar and finished taking 5 seconds — see the log
Import started on izar and finished taking 5 seconds — see the log
Import started on izar and finished taking 10 seconds — see the log

Recent revisions

420. By David Seifert <email address hidden> on 2021-05-30

Fix the memory leak in `main()`

419. By David Seifert <email address hidden> on 2021-05-30

clang-tidy --checks=readability-braces-around-statements

418. By David Seifert <email address hidden> on 2021-05-30

Validate BGZF block length

Bug: #200

417. By David Seifert <email address hidden> on 2021-05-30

Destroy tool after use

416. By David Seifert <email address hidden> on 2021-05-30

Replace single-char string literals by chars

415. By Rob Davies <email address hidden> on 2021-05-30

Sam and JSON conversion B-type tag support and bug fixes

* Add support for dumping B-type aux tags to JSON and SAM.

* Make PrintSam and PrintJson throw an exception if the aux data
  ends in a tag that requires more than the remaining number of bytes
  available. This stops them from reading beyond the end of the
  TagData string.

* Make PrintSam and PrintJson throw an exception if they find a tag
  of unknown type.

* Make ConvertTool::ConvertToolPrivate::Run() catch the new exceptions.

Closes: #171

414. By David Seifert <email address hidden> on 2021-05-24

Fully qualify `std::printf`

413. By David Seifert <email address hidden> on 2021-05-24

Enable shared and static builds in CI

412. By David Seifert <email address hidden> on 2021-05-24

Make `BamTools::Internal` classes hidden

411. By David Seifert <email address hidden> on 2021-05-24

Re-enable visibility support

Branch metadata

Branch format:
Branch format 7
Repository format:
Bazaar repository format 2a (needs bzr 1.16 or later)
This branch contains Public information 
Everyone can see this information.

Subscribers

No subscribers.