--- acgh-1.54.0.orig/debian/changelog +++ acgh-1.54.0/debian/changelog @@ -0,0 +1,90 @@ +acgh (1.54.0-1cran1ppa0) xenial; urgency=medium + + * Compilation for Ubuntu 16.04.2 LTS + + -- Michael Rutter Tue, 19 Sep 2017 02:56:32 +0000 + +acgh (1.54.0-1cran1) testing; urgency=low + + * cran2deb svn: 362M with DB version 1. + + -- cran2deb4ubuntu Sun, 17 Sep 2017 21:56:52 -0400 + + +acgh (1.52.0-1cran1) testing; urgency=low + + * cran2deb svn: 362M with DB version 1. + + -- cran2deb4ubuntu Wed, 28 Dec 2016 18:57:00 -0500 + + +acgh (1.50.0-1cran2) testing; urgency=low + + * cran2deb svn: 362M with DB version 1. + + -- cran2deb4ubuntu Sun, 23 Oct 2016 02:18:04 -0400 + + +acgh (1.50.0-1cran1) testing; urgency=low + + * cran2deb svn: 362M with DB version 1. + + -- cran2deb4ubuntu Thu, 16 Jun 2016 10:08:12 -0400 + + +acgh (1.48.0-1cran1) testing; urgency=low + + * cran2deb svn: 362M with DB version 1. + + -- cran2deb4ubuntu Thu, 07 Jan 2016 11:42:36 -0500 + + +acgh (1.46.0-1cran1) testing; urgency=low + + * cran2deb svn: 362M with DB version 1. + + -- cran2deb4ubuntu Sun, 10 May 2015 10:15:42 -0400 + + +acgh (1.40.0-1cran1) testing; urgency=low + + * cran2deb svn: 362M with DB version 1. + + -- cran2deb4ubuntu Tue, 03 Jun 2014 09:49:43 -0400 + + +acgh (1.38.0-1cran1) testing; urgency=low + + * cran2deb svn: 362M with DB version 1. + + -- cran2deb4ubuntu Fri, 10 May 2013 11:47:58 -0400 + + +acgh (1.36.0-1cran1) testing; urgency=low + + * cran2deb svn: 362M with DB version 1. + + -- cran2deb4ubuntu Mon, 26 Nov 2012 12:26:39 -0500 + + +acgh (1.34.0-1cran1) testing; urgency=low + + * cran2deb svn: 362M with DB version 1. + + -- cran2deb4ubuntu Fri, 10 May 2013 09:43:00 -0400 + + +acgh (1.30.0-1cran1) testing; urgency=low + + * cran2deb svn: 362M with DB version 1. + + -- cran2deb4ubuntu Sat, 18 Jun 2011 14:23:26 -0400 + + +acgh (1.28.0-1cran1) testing; urgency=low + + * cran2deb svn: 362M with DB version 1. + + -- cran2deb4ubuntu Thu, 16 Jun 2011 23:02:02 -0400 + + --- acgh-1.54.0.orig/debian/compat +++ acgh-1.54.0/debian/compat @@ -0,0 +1 @@ +7 \ No newline at end of file --- acgh-1.54.0.orig/debian/control +++ acgh-1.54.0/debian/control @@ -0,0 +1,25 @@ +Source: acgh +Section: gnu-r +Priority: optional +Maintainer: cran2deb4ubuntu +Build-Depends: r-base-dev, r-cran-cluster, r-cran-survival, + r-bioc-multtest, r-bioc-biobase, xvfb, xauth, xfonts-base, + r-base-core, debhelper (>> 4.1.0), cdbs +Standards-Version: 3.9.1 + +Package: r-bioc-acgh +Architecture: any +Depends: r-base-core, r-cran-cluster, r-cran-survival, r-bioc-multtest, + r-bioc-biobase, ${shlibs:Depends} +Description: GNU R package "Classes and functions for Array Comparative + Genomic Hybridization data." + . + Functions for reading aCGH data from image analysis output files and + clone information files, creation of aCGH S3 objects for storing these + data. Basic methods for accessing/replacing, subsetting, printing and + plotting aCGH objects. + . + Author: Jane Fridlyand , Peter Dimitrov + + . + Maintainer: Peter Dimitrov --- acgh-1.54.0.orig/debian/copyright +++ acgh-1.54.0/debian/copyright @@ -0,0 +1,19 @@ +This Debian package of the GNU R package aCGH was generated +automatically using cran2deb4ubuntu by cran2deb4ubuntu +. + +The original GNU R package is Copyright (C) 2017 Jane Fridlyand +, Peter Dimitrov +and possibly others. + +The original GNU R package is maintained by Peter Dimitrov + and was obtained from: + +http://www.bioconductor.org/packages/3.5/bioc/src/contrib + +The GNU R package DESCRIPTION offers a Copyright licenses under the +terms of the license: GPL-2 . On a Debian GNU/Linux system, common +licenses are included in the directory /usr/share/common-licenses/. + +The DESCRIPTION file for the original GNU R package can be found in +/usr/lib/R/site-library/r-bioc-acgh/DESCRIPTION --- acgh-1.54.0.orig/debian/rules +++ acgh-1.54.0/debian/rules @@ -0,0 +1,3 @@ +#!/usr/bin/make -f +debRreposname := bioc +include /usr/share/R/debian/r-cran.mk