lp:~ma5dev/madanalysis5/v1.7beta

bin/ma5 (+5/-0)
doc/expert_mode/main_expert.bib (+1151/-0)
doc/expert_mode/main_expert.tex (+939/-0)
doc/makedoc (+311/-0)
doc/normal_mode/main_normal.bib (+1151/-0)
doc/normal_mode/main_normal.tex (+641/-0)
madanalysis/IOinterface/job_writer.py (+23/-0)
madanalysis/UpdateNotes.txt (+48/-0)
madanalysis/configuration/fastsim_configuration.py (+4/-4)
madanalysis/configuration/fom_configuration.py (+4/-2)
madanalysis/configuration/recast_configuration.py (+33/-70)
madanalysis/core/launcher.py (+12/-0)
madanalysis/core/main.py (+16/-4)
madanalysis/dataset/dataset.py (+3/-3)
madanalysis/dataset/sample_info.py (+0/-2)
madanalysis/input/installation_options.dat (+9/-0)
madanalysis/install/detector_manager.py (+1/-0)
madanalysis/install/install_delphes.py (+299/-275)
madanalysis/install/install_fastjet.py (+2/-1)
madanalysis/install/install_fastjetcontrib.py (+2/-1)
madanalysis/install/install_manager.py (+14/-33)
madanalysis/install/install_pad.py (+206/-327)
madanalysis/install/install_service.py (+4/-4)
madanalysis/interpreter/cmd_define_tagger.py (+408/-0)
madanalysis/interpreter/cmd_display.py (+4/-3)
madanalysis/interpreter/cmd_import.py (+6/-0)
madanalysis/interpreter/cmd_install.py (+60/-98)
madanalysis/interpreter/cmd_plot.py (+2/-1)
madanalysis/interpreter/cmd_set.py (+21/-13)
madanalysis/interpreter/cmd_submit.py (+1/-1)
madanalysis/interpreter/interpreter.py (+21/-2)
madanalysis/interpreter/interpreter_base.py (+2/-0)
madanalysis/interpreter/ma5_interpreter.py (+18/-1)
madanalysis/job/job_candidate_cut.py (+3/-0)
madanalysis/job/job_execute.py (+12/-12)
madanalysis/job/job_initialize.py (+14/-2)
madanalysis/layout/fom_calculation.py (+9/-3)
madanalysis/layout/merging_plots.py (+175/-4)
madanalysis/layout/plotflow.py (+8/-5)
madanalysis/misc/run_recast.py (+15/-15)
madanalysis/system/architecture_info.py (+1/-0)
madanalysis/system/checkup.py (+20/-3)
madanalysis/system/config_checker.py (+13/-28)
madanalysis/system/detect_fastjet.py (+2/-2)
madanalysis/system/detect_manager.py (+22/-0)
madanalysis/system/detect_pad.py (+193/-0)
madanalysis/system/detect_root_graphical.py (+7/-1)
madanalysis/system/session_info.py (+6/-0)
madanalysis/system/user_info.py (+20/-0)
madanalysis/tagging/tagger.py (+180/-0)
tools/SampleAnalyzer/Commons/Base/ClusterAlgoBase.h (+1/-1)
tools/SampleAnalyzer/Commons/Base/Configuration.cpp (+88/-46)
tools/SampleAnalyzer/Commons/Base/Configuration.h (+4/-1)
tools/SampleAnalyzer/Commons/Base/DetectorBase.h (+1/-1)
tools/SampleAnalyzer/Commons/Base/PortableDatatypes.h (+4/-2)
tools/SampleAnalyzer/Commons/Base/TaggerBase.cpp (+7/-4)
tools/SampleAnalyzer/Commons/Base/TaggerBase.h (+1/-1)
tools/SampleAnalyzer/Commons/DataFormat/MCEventFormat.cpp (+9/-8)
tools/SampleAnalyzer/Commons/DataFormat/MCEventFormat.h (+5/-2)
tools/SampleAnalyzer/Commons/DataFormat/ParticleBaseFormat.h (+6/-6)
tools/SampleAnalyzer/Commons/DataFormat/RecEventFormat.h (+5/-5)
tools/SampleAnalyzer/Commons/DataFormat/RecJetFormat.h (+25/-2)
tools/SampleAnalyzer/Commons/DataFormat/RecLeptonFormat.h (+1/-1)
tools/SampleAnalyzer/Commons/DataFormat/RecParticleFormat.h (+6/-6)
tools/SampleAnalyzer/Commons/DataFormat/RecTauFormat.h (+1/-1)
tools/SampleAnalyzer/Commons/DataFormat/RecTrackFormat.h (+3/-3)
tools/SampleAnalyzer/Commons/DataFormat/WeightDefinition.cpp (+3/-3)
tools/SampleAnalyzer/Commons/Service/ConvertService.h (+2/-2)
tools/SampleAnalyzer/Commons/Service/DisplayService.h (+2/-2)
tools/SampleAnalyzer/Commons/Service/ExceptionType.h (+1/-1)
tools/SampleAnalyzer/Commons/Service/Identification.h (+12/-12)
tools/SampleAnalyzer/Commons/Service/Isolation.cpp (+16/-16)
tools/SampleAnalyzer/Commons/Service/Isolation.h (+6/-6)
tools/SampleAnalyzer/Commons/Service/IsolationBase.cpp (+30/-30)
tools/SampleAnalyzer/Commons/Service/IsolationBase.h (+24/-24)
tools/SampleAnalyzer/Commons/Service/IsolationCalorimeter.h (+16/-16)
tools/SampleAnalyzer/Commons/Service/IsolationCombined.h (+16/-16)
tools/SampleAnalyzer/Commons/Service/IsolationEFlow.h (+24/-24)
tools/SampleAnalyzer/Commons/Service/IsolationTracker.h (+16/-16)
tools/SampleAnalyzer/Commons/Service/LogReport.cpp (+4/-4)
tools/SampleAnalyzer/Commons/Service/Physics.h (+7/-7)
tools/SampleAnalyzer/Commons/Service/SortingService.h (+8/-8)
tools/SampleAnalyzer/Commons/Service/TimeService.cpp (+7/-7)
tools/SampleAnalyzer/Commons/Service/TimeService.h (+2/-2)
tools/SampleAnalyzer/Commons/Service/TransverseVariables.cpp (+145/-145)
tools/SampleAnalyzer/Commons/Service/TransverseVariables.h (+35/-35)
tools/SampleAnalyzer/Commons/Vector/MARotation3euler.h (+2/-2)
tools/SampleAnalyzer/Commons/Vector/MAVector3.cpp (+1/-1)
tools/SampleAnalyzer/Interfaces/delphes/DelphesDataFormat.cpp (+16/-4)
tools/SampleAnalyzer/Interfaces/delphes/DelphesDataFormat.h (+8/-3)
tools/SampleAnalyzer/Interfaces/delphes/DelphesDataFormat2.h (+4/-1)
tools/SampleAnalyzer/Interfaces/delphes/DelphesMemoryInterface.cpp (+15/-15)
tools/SampleAnalyzer/Interfaces/delphes/DelphesMemoryInterface.h (+3/-3)
tools/SampleAnalyzer/Interfaces/delphes/DelphesTreeReader.cpp (+31/-31)
tools/SampleAnalyzer/Interfaces/delphes/DelphesTreeReader.h (+3/-3)
tools/SampleAnalyzer/Interfaces/delphes/DetectorDelphes.cpp (+9/-9)
tools/SampleAnalyzer/Interfaces/delphes/DetectorDelphes.h (+5/-5)
tools/SampleAnalyzer/Interfaces/delphesMA5tune/DelphesMA5tuneTreeReader.cpp (+25/-25)
tools/SampleAnalyzer/Interfaces/delphesMA5tune/DelphesMA5tuneTreeReader.h (+3/-3)
tools/SampleAnalyzer/Interfaces/delphesMA5tune/DetectorDelphesMA5tune.cpp (+69/-43)
tools/SampleAnalyzer/Interfaces/delphesMA5tune/DetectorDelphesMA5tune.h (+6/-5)
tools/SampleAnalyzer/Interfaces/fastjet/ClusterAlgoCDFJetClu.cpp (+6/-6)
tools/SampleAnalyzer/Interfaces/fastjet/ClusterAlgoCDFJetClu.h (+2/-2)
tools/SampleAnalyzer/Interfaces/fastjet/ClusterAlgoCDFMidpoint.cpp (+7/-7)
tools/SampleAnalyzer/Interfaces/fastjet/ClusterAlgoCDFMidpoint.h (+2/-2)
tools/SampleAnalyzer/Interfaces/fastjet/ClusterAlgoFastJet.cpp (+6/-6)
tools/SampleAnalyzer/Interfaces/fastjet/ClusterAlgoFastJet.h (+3/-3)
tools/SampleAnalyzer/Interfaces/fastjet/ClusterAlgoGridJet.cpp (+5/-5)
tools/SampleAnalyzer/Interfaces/fastjet/ClusterAlgoGridJet.h (+2/-2)
tools/SampleAnalyzer/Interfaces/fastjet/ClusterAlgoSISCone.cpp (+6/-6)
tools/SampleAnalyzer/Interfaces/fastjet/ClusterAlgoSISCone.h (+2/-2)
tools/SampleAnalyzer/Interfaces/fastjet/ClusterAlgoStandard.cpp (+6/-6)
tools/SampleAnalyzer/Interfaces/fastjet/ClusterAlgoStandard.h (+2/-2)
tools/SampleAnalyzer/Interfaces/fastjet/DJRextractor.cpp (+10/-10)
tools/SampleAnalyzer/Interfaces/root/ROOTReader.cpp (+6/-6)
tools/SampleAnalyzer/Interfaces/zlib/gz_istream.h (+2/-2)
tools/SampleAnalyzer/Interfaces/zlib/gz_ostream.h (+2/-2)
tools/SampleAnalyzer/Interfaces/zlib/gz_streambase.cpp (+13/-13)
tools/SampleAnalyzer/Interfaces/zlib/gz_streambase.h (+5/-5)
tools/SampleAnalyzer/Process/Analyzer/AnalyzerBase.h (+5/-5)
tools/SampleAnalyzer/Process/Analyzer/AnalyzerManager.cpp (+6/-2)
tools/SampleAnalyzer/Process/Analyzer/MergingPlots.cpp (+19/-18)
tools/SampleAnalyzer/Process/Analyzer/MergingPlots.h (+2/-2)
tools/SampleAnalyzer/Process/Core/ManagerBase.h (+1/-1)
tools/SampleAnalyzer/Process/Core/ProgressBar.cpp (+3/-3)
tools/SampleAnalyzer/Process/Core/ProgressBar.h (+4/-4)
tools/SampleAnalyzer/Process/Core/SampleAnalyzer.cpp (+24/-24)
tools/SampleAnalyzer/Process/Core/SampleAnalyzer.h (+7/-7)
tools/SampleAnalyzer/Process/Core/xdr_istream.cpp (+4/-4)
tools/SampleAnalyzer/Process/Core/xdr_istream.h (+1/-1)
tools/SampleAnalyzer/Process/Counter/CounterManager.cpp (+4/-4)
tools/SampleAnalyzer/Process/Counter/CounterManager.h (+3/-3)
tools/SampleAnalyzer/Process/Counter/MultiRegionCounter.h (+1/-1)
tools/SampleAnalyzer/Process/Counter/MultiRegionCounterManager.h (+2/-2)
tools/SampleAnalyzer/Process/JetClustering/JetClusterer.cpp (+28/-28)
tools/SampleAnalyzer/Process/JetClustering/JetClusterer.h (+2/-2)
tools/SampleAnalyzer/Process/JetClustering/TauTagger.cpp (+17/-17)
tools/SampleAnalyzer/Process/JetClustering/TauTagger.h (+1/-1)
tools/SampleAnalyzer/Process/JetClustering/bTagger.cpp (+19/-17)
tools/SampleAnalyzer/Process/JetClustering/bTagger.h (+1/-1)
tools/SampleAnalyzer/Process/JetClustering/cTagger.cpp (+12/-12)
tools/SampleAnalyzer/Process/Plot/Histo.cpp (+4/-4)
tools/SampleAnalyzer/Process/Plot/Histo.h (+3/-3)
tools/SampleAnalyzer/Process/Plot/HistoFrequency.h (+9/-9)
tools/SampleAnalyzer/Process/Plot/HistoLogX.cpp (+2/-2)
tools/SampleAnalyzer/Process/Plot/MergingPlotType.cpp (+2/-2)
tools/SampleAnalyzer/Process/Plot/PlotBase.h (+3/-3)
tools/SampleAnalyzer/Process/Plot/PlotManager.cpp (+1/-1)
tools/SampleAnalyzer/Process/Plot/PlotManager.h (+2/-2)
tools/SampleAnalyzer/Process/Reader/HEPMCReader.cpp (+14/-13)
tools/SampleAnalyzer/Process/Reader/HEPMCReader.h (+13/-13)
tools/SampleAnalyzer/Process/Reader/LHCOReader.cpp (+10/-10)
tools/SampleAnalyzer/Process/Reader/LHCOReader.h (+6/-6)
tools/SampleAnalyzer/Process/Reader/LHEReader.cpp (+18/-18)
tools/SampleAnalyzer/Process/Reader/LHEReader.h (+6/-6)
tools/SampleAnalyzer/Process/Reader/ReaderTextBase.cpp (+5/-5)
tools/SampleAnalyzer/Process/Reader/ReaderTextBase.h (+7/-6)
tools/SampleAnalyzer/Process/Reader/STDHEPreader.cpp (+24/-24)
tools/SampleAnalyzer/Process/Reader/STDHEPreader.h (+12/-12)
tools/SampleAnalyzer/Process/RegionSelection/RegionSelection.h (+8/-8)
tools/SampleAnalyzer/Process/RegionSelection/RegionSelectionManager.cpp (+6/-6)
tools/SampleAnalyzer/Process/RegionSelection/RegionSelectionManager.h (+28/-28)
tools/SampleAnalyzer/Process/Writer/LHCOParticleFormat.cpp (+4/-4)
tools/SampleAnalyzer/Process/Writer/LHCOParticleFormat.h (+1/-1)
tools/SampleAnalyzer/Process/Writer/LHCOWriter.cpp (+14/-14)
tools/SampleAnalyzer/Process/Writer/LHCOWriter.h (+4/-4)
tools/SampleAnalyzer/Process/Writer/LHEWriter.cpp (+23/-23)
tools/SampleAnalyzer/Process/Writer/LHEWriter.h (+5/-5)
tools/SampleAnalyzer/Process/Writer/SAFWriter.cpp (+8/-8)
tools/SampleAnalyzer/Process/Writer/SAFWriter.h (+6/-6)
tools/SampleAnalyzer/Process/Writer/WriterBase.h (+8/-8)
tools/SampleAnalyzer/Process/Writer/WriterTextBase.cpp (+3/-3)
tools/SampleAnalyzer/Process/Writer/WriterTextBase.h (+5/-5)
tools/SampleAnalyzer/Test/Commons/Test.cpp (+1/-1)
tools/SampleAnalyzer/Test/Delphes/Test.cpp (+1/-1)
tools/SampleAnalyzer/Test/DelphesMA5tune/Test.cpp (+1/-1)
tools/SampleAnalyzer/Test/Fastjet/Test.cpp (+1/-1)
tools/SampleAnalyzer/Test/Process/Test.cpp (+1/-1)
tools/SampleAnalyzer/Test/Root/Test.cpp (+1/-1)
tools/SampleAnalyzer/Test/Zlib/Test.cpp (+1/-1)