lp:~jtaylor/ubuntu/oneiric/ncbi-blast+/fix-803185

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Merged into lp:ubuntu/oneiric/ncbi-blast+ at revision 5

Kees Cook: Approve on 2011-07-19

Diff: 31 lines (+13/-0)

2 files modified

debian/changelog (+8/-0)
debian/rules (+5/-0)

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Bug #803185: ncbi-blast+ version 2.2.25-3 failed to build on i386

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5. By Julian Taylor on 2011-07-18

debian/rules: disable --as-needed build (LP: #803185)
almost all private libs are underlinked, fixing them is not worth the
effort

4. By Aaron M. Ucko on 2011-06-09

* Team upload.
* debian/rules:
  - Export MAKE to override an internal upstream build script that
    otherwise incorrectly defaults to gmake on non-Linux
    architectures. (Really closes: #629656, with any luck.)
  - Force CONFIG_SHELL=/bin/bash to avoid lossage that can occur with zsh4
    masquerading as ksh, which configure otherwise favors (due to complaints
    from users with broken BASH_ENV scripts that change directories).

3. By Aaron M. Ucko on 2011-06-08

* Team upload.
* Fix several sources of build failures (closes: #629656):
  - debian/rules (override_dh_install): Correctly support building only
    architecture-dependent packages.
    (DEB_CONFIGURE_EXTRA_FLAGS): Add --without-caution to override the
    upstream build system's reluctance to build shared libraries on the
    Hurd or kFreeBSD, which it doesn't specifically recognize. Limit C++
    optimization level to -O (rather than the default -O2) on mips(el),
    on which g++ otherwise crashes. :-/
  - debian/patches/support_other_cpus (new; committed upstream too):
    build correctly on architectures that wound up defining
    NCBI_SLOW_ATOMIC_SWAP (spuriously in the case of powerpc,
    whose detection the patch fixes as well).

2. By osallou on 2011-06-08

Initial release (Closes: #624394)

1. By osallou on 2011-06-08

Import upstream version 2.2.25