lp:~jamesmadd/dolfin-adjoint/timestepping
Created by
James Maddison
and last modified
Timestepping abstraction and automated adjoining
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Diff: 19208 lines (+18605/-0)100 files modifiedtimestepping/COPYING (+674/-0)
timestepping/COPYING.LESSER (+165/-0)
timestepping/manual/bibliography.bib (+51/-0)
timestepping/manual/examples/TimeFunction (+38/-0)
timestepping/manual/examples/TimeLevel (+49/-0)
timestepping/manual/examples/TimeLevels (+42/-0)
timestepping/manual/examples/add_solve (+52/-0)
timestepping/manual/examples/add_solve_statics (+54/-0)
timestepping/manual/examples/diffusion_fe (+65/-0)
timestepping/manual/examples/diffusion_fe_adjoined (+77/-0)
timestepping/manual/examples/statics (+33/-0)
timestepping/manual/examples/time_discretisations (+267/-0)
timestepping/manual/examples/wrappers (+28/-0)
timestepping/manual/makefile (+24/-0)
timestepping/manual/manual.tex (+1636/-0)
timestepping/python/dolfin_adjoint_timestepping/__init__.py (+51/-0)
timestepping/python/dolfin_adjoint_timestepping/dolfin_adjoint_timestepping.py (+439/-0)
timestepping/python/timestepping/__init__.py (+112/-0)
timestepping/python/timestepping/caches.py (+266/-0)
timestepping/python/timestepping/checkpointing.py (+394/-0)
timestepping/python/timestepping/embedded_cpp.py (+232/-0)
timestepping/python/timestepping/equation_solvers.py (+556/-0)
timestepping/python/timestepping/exceptions.py (+56/-0)
timestepping/python/timestepping/fenics_overrides.py (+261/-0)
timestepping/python/timestepping/fenics_patches.py (+184/-0)
timestepping/python/timestepping/fenics_utils.py (+437/-0)
timestepping/python/timestepping/fenics_versions.py (+156/-0)
timestepping/python/timestepping/parameters.py (+71/-0)
timestepping/python/timestepping/pre_assembled_adjoint.py (+548/-0)
timestepping/python/timestepping/pre_assembled_equations.py (+444/-0)
timestepping/python/timestepping/pre_assembled_forms.py (+397/-0)
timestepping/python/timestepping/quadrature.py (+157/-0)
timestepping/python/timestepping/statics.py (+144/-0)
timestepping/python/timestepping/time_functions.py (+433/-0)
timestepping/python/timestepping/time_levels.py (+346/-0)
timestepping/python/timestepping/time_systems.py (+1978/-0)
timestepping/python/timestepping/versions.py (+134/-0)
timestepping/python/timestepping/vtu_io.py (+342/-0)
timestepping/test (+197/-0)
timestepping/tests/fenics/dolfin_vtkprecision (+68/-0)
timestepping/tests/fenics/ffc_1d_circumradius (+33/-0)
timestepping/tests/long/advection_2d_limiter_rk3 (+288/-0)
timestepping/tests/long/advection_2d_rk3 (+166/-0)
timestepping/tests/long/boussinesq-navier-stokes_cn_picard2 (+415/-0)
timestepping/tests/long/cahn-hilliard_cn_newton (+131/-0)
timestepping/tests/long/data/circle_100.geo (+17/-0)
timestepping/tests/long/data/square_10-200.geo (+21/-0)
timestepping/tests/long/data/square_100.geo (+12/-0)
timestepping/tests/long/lorenz_cn_newton (+175/-0)
timestepping/tests/long/mantle_convection/composition.py (+56/-0)
timestepping/tests/long/mantle_convection/mantle_convection (+204/-0)
timestepping/tests/long/mantle_convection/numerics.py (+60/-0)
timestepping/tests/long/mantle_convection/parameters.py (+105/-0)
timestepping/tests/long/mantle_convection/stokes.py (+57/-0)
timestepping/tests/long/mantle_convection/temperature.py (+88/-0)
timestepping/tests/long/navier-stokes_cn_picard2 (+379/-0)
timestepping/tests/short/advection-diffusion_cn (+89/-0)
timestepping/tests/short/advection_1d_cn (+90/-0)
timestepping/tests/short/advection_1d_cn_da (+104/-0)
timestepping/tests/short/advection_1d_dgt (+127/-0)
timestepping/tests/short/advection_1d_fe (+105/-0)
timestepping/tests/short/advection_1d_rk4 (+124/-0)
timestepping/tests/short/burgers_ab2 (+100/-0)
timestepping/tests/short/burgers_ab2_da (+113/-0)
timestepping/tests/short/burgers_ab3 (+105/-0)
timestepping/tests/short/burgers_be_custom_newton (+113/-0)
timestepping/tests/short/burgers_be_custom_newton_da (+126/-0)
timestepping/tests/short/burgers_be_newton (+105/-0)
timestepping/tests/short/burgers_be_newton_da (+118/-0)
timestepping/tests/short/burgers_be_picard (+136/-0)
timestepping/tests/short/burgers_be_picard_da (+149/-0)
timestepping/tests/short/burgers_fe (+105/-0)
timestepping/tests/short/burgers_fe_da (+118/-0)
timestepping/tests/short/burgers_leapfrog (+102/-0)
timestepping/tests/short/burgers_leapfrog_da (+115/-0)
timestepping/tests/short/burgers_rk2 (+101/-0)
timestepping/tests/short/bve_ab3 (+161/-0)
timestepping/tests/short/bve_rk2 (+104/-0)
timestepping/tests/short/data/square_125.geo (+12/-0)
timestepping/tests/short/elastodynamics (+195/-0)
timestepping/tests/short/fibonacci (+47/-0)
timestepping/tests/short/linearised_shallow_water_cn/kelvin_new.py (+71/-0)
timestepping/tests/short/linearised_shallow_water_cn/shallow_water (+78/-0)
timestepping/tests/short/linearised_shallow_water_cn/sw_lib.py (+283/-0)
timestepping/tests/short/qg_ab3 (+305/-0)
timestepping/tests/short/shm_cn (+106/-0)
timestepping/tests/short/shm_cn_da (+118/-0)
timestepping/tests/short/stokes (+261/-0)
timestepping/tests/unit/add_solve_assignment (+46/-0)
timestepping/tests/unit/assign_ml2 (+50/-0)
timestepping/tests/unit/assign_ml3 (+51/-0)
timestepping/tests/unit/counting (+135/-0)
timestepping/tests/unit/embedded_cpp (+56/-0)
timestepping/tests/unit/incomplete_quadrature (+64/-0)
timestepping/tests/unit/lumped_mass (+61/-0)
timestepping/tests/unit/mass (+84/-0)
timestepping/tests/unit/minimise_functional (+50/-0)
timestepping/tests/unit/non_static_solver (+73/-0)
timestepping/tests/unit/scale (+45/-0)
timestepping/tests/unit/vtu_io (+39/-0)
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Branch information
Recent revisions
- 666. By James Maddison <email address hidden>
-
- Give classes in time_systems.py more descriptive names
- More graceful resolution of a namespace clash with dolfin-adjoint
- Make checkpointing less likely to lead to deadlocks in parallel
- Make dependency processing less likely to lead to deadlocks in parallel
- Work around an obscure bug with FEniCS 1.0 and SciPy 0.12.0
- Add is_static method to pre-assembled forms
- Make static bi-linear form pre-assembly more repeatable
Branch metadata
- Branch format:
- Branch format 7
- Repository format:
- Bazaar repository format 2a (needs bzr 1.16 or later)
- Stacked on:
- lp:dolfin-adjoint
