Ubuntu
bioperl-run package

ubuntu/+source/bioperl-run:applied/ubuntu/zesty-proposed

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  2. lp:ubuntu/+source/bioperl-run
  3. applied/ubuntu/zesty-proposed
Last commit made on 2017-01-13
Get this branch:
git clone -b applied/ubuntu/zesty-proposed https://git.launchpad.net/ubuntu/+source/bioperl-run
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Branch merges

Branch information

Name:
applied/ubuntu/zesty-proposed
Repository:
lp:ubuntu/+source/bioperl-run

Recent commits

82e6d58... by Andreas Tille

1.7.1-3 (patches applied)

Imported using git-ubuntu import.

4c17bf7... by Andreas Tille

hyphy.patch

No DEP3 Subject or Description header found

Gbp-Pq: hyphy.patch.

597526a... by Andreas Tille

Hmmmm, seems one contig less is detected - no idea why

Gbp-Pq: skip_tests_for_maq.patch.

122098d... by Andreas Tille

Somehow tests are excluded automatically - adjust expected number of tests

Gbp-Pq: skip_tests_for_ncbi-blast+.patch.

421b8b8... by Andreas Tille

Exclude some failed test when using muscle. Seems Debian's muscle is newer

Gbp-Pq: skip_tests_for_muscle.patch.

c2b8989... by Andreas Tille

A lot of tests need to be skipped. BioPerl is spoorting only old infernal interface

Gbp-Pq: skip_tests_for_infernal.patch.

d48f383... by Andreas Tille

Exclude three failed tests of bowtie

Gbp-Pq: skip_tests_for_bowtie.patch.

39513b5... by Andreas Tille

Ignore a broken version comparison

Gbp-Pq: skip_tests_for_t-coffee.patch.

bf7f22f... by Andreas Tille

Somehow there are issues to initialise openmpi, but beside these warnings there are also errors

Gbp-Pq: skip_tests_for_phyml.patch.

e4832e5... by Andreas Tille

No idea why the number of tests is 8 instead of 9

Gbp-Pq: skip_tests_for_phylip.patch.