Ubuntu
bioperl-run package

ubuntu/+source/bioperl-run:applied/ubuntu/disco-proposed

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  2. lp:ubuntu/+source/bioperl-run
  3. applied/ubuntu/disco-proposed
Last commit made on 2019-02-12
Get this branch:
git clone -b applied/ubuntu/disco-proposed https://git.launchpad.net/ubuntu/+source/bioperl-run
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Branch merges

Branch information

Name:
applied/ubuntu/disco-proposed
Repository:
lp:ubuntu/+source/bioperl-run

Recent commits

d4b9c26... by Andreas Tille

1.7.3-1 (patches applied)

Imported using git-ubuntu import.

c95b239... by Andreas Tille

Somehow these tests are failing - no idea why

Gbp-Pq: skip_tests_for_soap.patch.

5f03190... by Andreas Tille

For some reason Ensembl.t test is executed in autopkgtest run even

Gbp-Pq: remove_tests_for_ensembl.patch.

2caaff7... by Andreas Tille

Hyphy

Gbp-Pq: hyphy.patch.

960bd0e... by Andreas Tille

Somehow tests are excluded automatically - adjust expected number of tests

Gbp-Pq: skip_tests_for_ncbi-blast+.patch.

d017e7e... by Andreas Tille

Exclude some failed test when using muscle. Seems Debian's muscle is newer

Gbp-Pq: skip_tests_for_muscle.patch.

5f4b30a... by Andreas Tille

A lot of tests need to be skipped. BioPerl is spoorting only old infernal interface

Gbp-Pq: skip_tests_for_infernal.patch.

19ac3c7... by Andreas Tille

Somehow there are issues to initialise openmpi, but beside these warnings there are also errors

Gbp-Pq: skip_tests_for_phyml.patch.

e58a040... by Andreas Tille

No idea why the number of tests is 8 instead of 9

Gbp-Pq: skip_tests_for_phylip.patch.

300d68c... by Andreas Tille

Possibly incompatible wise versions - ignore these tests

Gbp-Pq: skip_tests_for_wise.patch.