RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux akhlut 2.6.24-32-xen #1 SMP Mon Dec 3 16:12:25 UTC 2012 x86_64 Buildd toolchain package versions: launchpad-buildd_124~0.IS.08.04 python-lpbuildd_124~0.IS.08.04 bzr-builder_0.7.2+bzr156-0ubuntu1~1.IS.8.04 bzr_2.4.0-0ubuntu2~11.IS.8.04 dpkg-dev_1.14.16.6ubuntu4.2. Syncing the system clock with the buildd NTP service... 27 Jul 04:06:24 ntpdate[3378]: step time server 10.211.37.1 offset -51418.260313 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-6214769', '/home/buildd/filecache-default/bcd5dc063ce51e1147d70d5a7a54c6f9cc3d3ea4'] Unpacking chroot for build PACKAGEBUILD-6214769 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-6214769'] Mounting chroot for build PACKAGEBUILD-6214769 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-6214769', 'deb http://ppa.launchpad.net/dilawar/moose/ubuntu trusty main', 'deb http://ftpmaster.internal/ubuntu trusty main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu trusty-security main restricted universe multiverse', 'deb http://ftpmaster.internal/ubuntu trusty-updates main restricted universe multiverse'] Overriding sources.list in build-PACKAGEBUILD-6214769 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-6214769', 'amd64'] Updating debian chroot for build PACKAGEBUILD-6214769 Ign http://ppa.launchpad.net trusty InRelease Ign http://ftpmaster.internal trusty InRelease Ign http://ftpmaster.internal trusty-security InRelease Get:1 http://ppa.launchpad.net trusty Release.gpg [836 B] Ign http://ftpmaster.internal trusty-updates InRelease Get:2 http://ppa.launchpad.net trusty Release [14.0 kB] Get:3 http://ftpmaster.internal trusty Release.gpg [933 B] Get:4 http://ftpmaster.internal trusty-security Release.gpg [933 B] Get:5 http://ftpmaster.internal trusty-updates Release.gpg [933 B] Get:6 http://ftpmaster.internal trusty Release [58.5 kB] Ign http://ppa.launchpad.net trusty Release Get:7 http://ftpmaster.internal trusty-security Release [58.5 kB] Get:8 http://ftpmaster.internal trusty-updates Release [58.5 kB] Get:9 http://ppa.launchpad.net trusty/main amd64 Packages [476 B] Get:10 http://ftpmaster.internal trusty/main amd64 Packages [1350 kB] Ign http://ppa.launchpad.net trusty/main Translation-en Get:11 http://ftpmaster.internal trusty/restricted amd64 Packages [13.0 kB] Get:12 http://ftpmaster.internal trusty/universe amd64 Packages [5859 kB] Get:13 http://ftpmaster.internal trusty/multiverse amd64 Packages [132 kB] Get:14 http://ftpmaster.internal trusty/main Translation-en [762 kB] Get:15 http://ftpmaster.internal trusty/multiverse Translation-en [102 kB] Get:16 http://ftpmaster.internal trusty/restricted Translation-en [3457 B] Get:17 http://ftpmaster.internal trusty/universe Translation-en [4089 kB] Get:18 http://ftpmaster.internal trusty-security/main amd64 Packages [117 kB] Get:19 http://ftpmaster.internal trusty-security/restricted amd64 Packages [14 B] Get:20 http://ftpmaster.internal trusty-security/universe amd64 Packages [39.0 kB] Get:21 http://ftpmaster.internal trusty-security/multiverse amd64 Packages [1147 B] Get:22 http://ftpmaster.internal trusty-security/main Translation-en [56.2 kB] Get:23 http://ftpmaster.internal trusty-security/multiverse Translation-en [587 B] Get:24 http://ftpmaster.internal trusty-security/restricted Translation-en [14 B] Get:25 http://ftpmaster.internal trusty-security/universe Translation-en [22.1 kB] Get:26 http://ftpmaster.internal trusty-updates/main amd64 Packages [239 kB] Get:27 http://ftpmaster.internal trusty-updates/restricted amd64 Packages [14 B] Get:28 http://ftpmaster.internal trusty-updates/universe amd64 Packages [161 kB] Get:29 http://ftpmaster.internal trusty-updates/multiverse amd64 Packages [7392 B] Get:30 http://ftpmaster.internal trusty-updates/main Translation-en [110 kB] Get:31 http://ftpmaster.internal trusty-updates/multiverse Translation-en [3971 B] Get:32 http://ftpmaster.internal trusty-updates/restricted Translation-en [14 B] Get:33 http://ftpmaster.internal trusty-updates/universe Translation-en [79.0 kB] Fetched 13.3 MB in 5s (2416 kB/s) Reading package lists... W: GPG error: http://ppa.launchpad.net trusty Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 8D4F422A65B26E52 Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: apt apt-transport-https base-files bash bsdutils dpkg dpkg-dev gnupg gpgv ifupdown initramfs-tools initramfs-tools-bin libapt-pkg4.12 libblkid1 libcgmanager0 libdbus-1-3 libdpkg-perl libgnutls26 libjson-c2 libjson0 libmount1 libselinux1 libssl1.0.0 libtasn1-6 libudev1 libuuid1 linux-libc-dev mount openssl patch tzdata udev upstart util-linux 34 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 10.9 MB of archives. After this operation, 43.0 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ trusty-updates/main base-files amd64 7.2ubuntu5.1 [70.2 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty-updates/main bash amd64 4.3-7ubuntu1 [575 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty-security/main dpkg amd64 1.17.5ubuntu5.3 [1954 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty-updates/main mount amd64 2.20.1-5.1ubuntu20.1 [115 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty-security/main tzdata all 2014e-0ubuntu0.14.04 [181 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty-updates/main util-linux amd64 2.20.1-5.1ubuntu20.1 [456 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty-security/main libapt-pkg4.12 amd64 1.0.1ubuntu2.1 [639 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty-security/main gpgv amd64 1.4.16-1ubuntu2.1 [160 kB] Get:9 http://ftpmaster.internal/ubuntu/ trusty-security/main gnupg amd64 1.4.16-1ubuntu2.1 [610 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty-security/main apt amd64 1.0.1ubuntu2.1 [952 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty-updates/main bsdutils amd64 1:2.20.1-5.1ubuntu20.1 [33.9 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty-updates/main libuuid1 amd64 2.20.1-5.1ubuntu20.1 [10.9 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty-updates/main libblkid1 amd64 2.20.1-5.1ubuntu20.1 [62.6 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty-updates/main libselinux1 amd64 2.2.2-1ubuntu0.1 [58.7 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty-updates/main libmount1 amd64 2.20.1-5.1ubuntu20.1 [60.1 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty-security/main libtasn1-6 amd64 3.4-3ubuntu0.1 [43.5 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty-security/main libgnutls26 amd64 2.12.23-12ubuntu2.1 [393 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty-security/main libssl1.0.0 amd64 1.0.1f-1ubuntu2.4 [826 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty-security/main libdbus-1-3 amd64 1.6.18-0ubuntu4.1 [131 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty-security/main libjson-c2 amd64 0.11-3ubuntu1.2 [22.0 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty-updates/main libcgmanager0 amd64 0.24-0ubuntu7 [29.0 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty-updates/main udev amd64 204-5ubuntu20.3 [735 kB] Get:23 http://ftpmaster.internal/ubuntu/ trusty-updates/main libudev1 amd64 204-5ubuntu20.3 [33.5 kB] Get:24 http://ftpmaster.internal/ubuntu/ trusty-updates/main ifupdown amd64 0.7.47.2ubuntu4.1 [52.1 kB] Get:25 http://ftpmaster.internal/ubuntu/ trusty-updates/main initramfs-tools all 0.103ubuntu4.2 [44.3 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty-updates/main initramfs-tools-bin amd64 0.103ubuntu4.2 [8922 B] Get:27 http://ftpmaster.internal/ubuntu/ trusty-security/main libjson0 amd64 0.11-3ubuntu1.2 [1080 B] Get:28 http://ftpmaster.internal/ubuntu/ trusty-updates/main upstart amd64 1.12.1-0ubuntu4.2 [390 kB] Get:29 http://ftpmaster.internal/ubuntu/ trusty-security/main apt-transport-https amd64 1.0.1ubuntu2.1 [25.1 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty-security/main openssl amd64 1.0.1f-1ubuntu2.4 [489 kB] Get:31 http://ftpmaster.internal/ubuntu/ trusty-security/main dpkg-dev all 1.17.5ubuntu5.3 [726 kB] Get:32 http://ftpmaster.internal/ubuntu/ trusty-security/main libdpkg-perl all 1.17.5ubuntu5.3 [179 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty-updates/main patch amd64 2.7.1-4ubuntu1 [84.4 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty-security/main linux-libc-dev amd64 3.13.0-32.57 [783 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 10.9 MB in 0s (14.0 MB/s) (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../base-files_7.2ubuntu5.1_amd64.deb ... Unpacking base-files (7.2ubuntu5.1) over (7.2ubuntu5) ... Setting up base-files (7.2ubuntu5.1) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Installing new version of config file /etc/os-release ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../bash_4.3-7ubuntu1_amd64.deb ... Unpacking bash (4.3-7ubuntu1) over (4.3-6ubuntu1) ... Setting up bash (4.3-7ubuntu1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../dpkg_1.17.5ubuntu5.3_amd64.deb ... Unpacking dpkg (1.17.5ubuntu5.3) over (1.17.5ubuntu5) ... Setting up dpkg (1.17.5ubuntu5.3) ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../mount_2.20.1-5.1ubuntu20.1_amd64.deb ... Unpacking mount (2.20.1-5.1ubuntu20.1) over (2.20.1-5.1ubuntu20) ... Setting up mount (2.20.1-5.1ubuntu20.1) ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../tzdata_2014e-0ubuntu0.14.04_all.deb ... Unpacking tzdata (2014e-0ubuntu0.14.04) over (2014b-1) ... Setting up tzdata (2014e-0ubuntu0.14.04) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Jul 26 13:49:52 UTC 2014. Universal Time is now: Sat Jul 26 13:49:52 UTC 2014. Run 'dpkg-reconfigure tzdata' if you wish to change it. (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../util-linux_2.20.1-5.1ubuntu20.1_amd64.deb ... Unpacking util-linux (2.20.1-5.1ubuntu20.1) over (2.20.1-5.1ubuntu20) ... Setting up util-linux (2.20.1-5.1ubuntu20.1) ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../libapt-pkg4.12_1.0.1ubuntu2.1_amd64.deb ... Unpacking libapt-pkg4.12:amd64 (1.0.1ubuntu2.1) over (1.0.1ubuntu2) ... Setting up libapt-pkg4.12:amd64 (1.0.1ubuntu2.1) ... Processing triggers for libc-bin (2.19-0ubuntu6) ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../gpgv_1.4.16-1ubuntu2.1_amd64.deb ... Unpacking gpgv (1.4.16-1ubuntu2.1) over (1.4.16-1ubuntu2) ... Setting up gpgv (1.4.16-1ubuntu2.1) ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../gnupg_1.4.16-1ubuntu2.1_amd64.deb ... Unpacking gnupg (1.4.16-1ubuntu2.1) over (1.4.16-1ubuntu2) ... Setting up gnupg (1.4.16-1ubuntu2.1) ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../apt_1.0.1ubuntu2.1_amd64.deb ... Unpacking apt (1.0.1ubuntu2.1) over (1.0.1ubuntu2) ... Setting up apt (1.0.1ubuntu2.1) ... Processing triggers for libc-bin (2.19-0ubuntu6) ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.20.1-5.1ubuntu20.1_amd64.deb ... Unpacking bsdutils (1:2.20.1-5.1ubuntu20.1) over (1:2.20.1-5.1ubuntu20) ... Setting up bsdutils (1:2.20.1-5.1ubuntu20.1) ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../libuuid1_2.20.1-5.1ubuntu20.1_amd64.deb ... Unpacking libuuid1:amd64 (2.20.1-5.1ubuntu20.1) over (2.20.1-5.1ubuntu20) ... Setting up libuuid1:amd64 (2.20.1-5.1ubuntu20.1) ... Processing triggers for libc-bin (2.19-0ubuntu6) ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../libblkid1_2.20.1-5.1ubuntu20.1_amd64.deb ... Unpacking libblkid1:amd64 (2.20.1-5.1ubuntu20.1) over (2.20.1-5.1ubuntu20) ... Setting up libblkid1:amd64 (2.20.1-5.1ubuntu20.1) ... Processing triggers for libc-bin (2.19-0ubuntu6) ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../libselinux1_2.2.2-1ubuntu0.1_amd64.deb ... Unpacking libselinux1:amd64 (2.2.2-1ubuntu0.1) over (2.2.2-1) ... Setting up libselinux1:amd64 (2.2.2-1ubuntu0.1) ... Processing triggers for libc-bin (2.19-0ubuntu6) ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../libmount1_2.20.1-5.1ubuntu20.1_amd64.deb ... Unpacking libmount1:amd64 (2.20.1-5.1ubuntu20.1) over (2.20.1-5.1ubuntu20) ... Setting up libmount1:amd64 (2.20.1-5.1ubuntu20.1) ... Processing triggers for libc-bin (2.19-0ubuntu6) ... (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../libtasn1-6_3.4-3ubuntu0.1_amd64.deb ... Unpacking libtasn1-6:amd64 (3.4-3ubuntu0.1) over (3.4-3) ... Preparing to unpack .../libgnutls26_2.12.23-12ubuntu2.1_amd64.deb ... Unpacking libgnutls26:amd64 (2.12.23-12ubuntu2.1) over (2.12.23-12ubuntu2) ... Preparing to unpack .../libssl1.0.0_1.0.1f-1ubuntu2.4_amd64.deb ... Unpacking libssl1.0.0:amd64 (1.0.1f-1ubuntu2.4) over (1.0.1f-1ubuntu2) ... Preparing to unpack .../libdbus-1-3_1.6.18-0ubuntu4.1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.6.18-0ubuntu4.1) over (1.6.18-0ubuntu4) ... Preparing to unpack .../libjson-c2_0.11-3ubuntu1.2_amd64.deb ... Unpacking libjson-c2:amd64 (0.11-3ubuntu1.2) over (0.11-3ubuntu1) ... Preparing to unpack .../libcgmanager0_0.24-0ubuntu7_amd64.deb ... Unpacking libcgmanager0:amd64 (0.24-0ubuntu7) over (0.24-0ubuntu5) ... Preparing to unpack .../udev_204-5ubuntu20.3_amd64.deb ... Adding 'diversion of /bin/udevadm to /bin/udevadm.upgrade by fake-udev' Unpacking udev (204-5ubuntu20.3) over (204-5ubuntu20) ... Preparing to unpack .../libudev1_204-5ubuntu20.3_amd64.deb ... Unpacking libudev1:amd64 (204-5ubuntu20.3) over (204-5ubuntu20) ... Preparing to unpack .../ifupdown_0.7.47.2ubuntu4.1_amd64.deb ... Unpacking ifupdown (0.7.47.2ubuntu4.1) over (0.7.47.2ubuntu4) ... Preparing to unpack .../initramfs-tools_0.103ubuntu4.2_all.deb ... Unpacking initramfs-tools (0.103ubuntu4.2) over (0.103ubuntu4) ... Preparing to unpack .../initramfs-tools-bin_0.103ubuntu4.2_amd64.deb ... Unpacking initramfs-tools-bin (0.103ubuntu4.2) over (0.103ubuntu4) ... Preparing to unpack .../libjson0_0.11-3ubuntu1.2_amd64.deb ... Unpacking libjson0:amd64 (0.11-3ubuntu1.2) over (0.11-3ubuntu1) ... Preparing to unpack .../upstart_1.12.1-0ubuntu4.2_amd64.deb ... Unpacking upstart (1.12.1-0ubuntu4.2) over (1.12.1-0ubuntu4) ... Preparing to unpack .../apt-transport-https_1.0.1ubuntu2.1_amd64.deb ... Unpacking apt-transport-https (1.0.1ubuntu2.1) over (1.0.1ubuntu2) ... Preparing to unpack .../openssl_1.0.1f-1ubuntu2.4_amd64.deb ... Unpacking openssl (1.0.1f-1ubuntu2.4) over (1.0.1f-1ubuntu2) ... Preparing to unpack .../dpkg-dev_1.17.5ubuntu5.3_all.deb ... Unpacking dpkg-dev (1.17.5ubuntu5.3) over (1.17.5ubuntu5) ... Preparing to unpack .../libdpkg-perl_1.17.5ubuntu5.3_all.deb ... Unpacking libdpkg-perl (1.17.5ubuntu5.3) over (1.17.5ubuntu5) ... Preparing to unpack .../patch_2.7.1-4ubuntu1_amd64.deb ... Unpacking patch (2.7.1-4ubuntu1) over (2.7.1-4) ... Preparing to unpack .../linux-libc-dev_3.13.0-32.57_amd64.deb ... Unpacking linux-libc-dev:amd64 (3.13.0-32.57) over (3.13.0-24.46) ... Setting up libtasn1-6:amd64 (3.4-3ubuntu0.1) ... Setting up libgnutls26:amd64 (2.12.23-12ubuntu2.1) ... Setting up libssl1.0.0:amd64 (1.0.1f-1ubuntu2.4) ... Setting up libdbus-1-3:amd64 (1.6.18-0ubuntu4.1) ... Setting up libjson-c2:amd64 (0.11-3ubuntu1.2) ... Setting up libcgmanager0:amd64 (0.24-0ubuntu7) ... Setting up libudev1:amd64 (204-5ubuntu20.3) ... Setting up udev (204-5ubuntu20.3) ... invoke-rc.d: policy-rc.d denied execution of restart. Removing 'diversion of /bin/udevadm to /bin/udevadm.upgrade by fake-udev' update-initramfs: deferring update (trigger activated) Setting up ifupdown (0.7.47.2ubuntu4.1) ... Installing new version of config file /etc/init/network-interface.conf ... Setting up initramfs-tools-bin (0.103ubuntu4.2) ... Setting up initramfs-tools (0.103ubuntu4.2) ... update-initramfs: deferring update (trigger activated) Setting up libjson0:amd64 (0.11-3ubuntu1.2) ... Setting up upstart (1.12.1-0ubuntu4.2) ... Installing new version of config file /etc/cron.daily/upstart ... Setting up apt-transport-https (1.0.1ubuntu2.1) ... Setting up openssl (1.0.1f-1ubuntu2.4) ... Setting up libdpkg-perl (1.17.5ubuntu5.3) ... Setting up patch (2.7.1-4ubuntu1) ... Setting up dpkg-dev (1.17.5ubuntu5.3) ... Setting up linux-libc-dev:amd64 (3.13.0-32.57) ... Processing triggers for libc-bin (2.19-0ubuntu6) ... Processing triggers for initramfs-tools (0.103ubuntu4.2) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-6214769', 'amd64', 'trusty', '--nolog', '--batch', '--archive=ubuntu', '--dist=trusty', '--purpose=PPA', '--architecture=amd64', '--comp=main', 'moose_3.0-0~2918~ubuntu14.04.1.dsc'] Initiating build PACKAGEBUILD-6214769 with 1 jobs across 1 processor cores. Kernel reported to sbuild: 2.6.24-32-xen #1 SMP Mon Dec 3 16:12:25 UTC 2012 x86_64 Automatic build of moose_3.0-0~2918~ubuntu14.04.1 on akhlut by sbuild/amd64 1.170.5 Build started at 20140726-1350 ****************************************************************************** moose_3.0-0~2918~ubuntu14.04.1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 8.0.0), cdbs, devscripts, libgsl0-dev (>= 1.16), cmake, libhdf5-dev, python-dev, python-numpy, python-setuptools, libopenmpi-dev Checking for already installed source dependencies... debhelper: missing cdbs: missing devscripts: missing libgsl0-dev: missing cmake: missing libhdf5-dev: missing python-dev: missing python-numpy: missing python-setuptools: missing libopenmpi-dev: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper cdbs devscripts libgsl0-dev cmake libhdf5-dev python-dev python-numpy python-setuptools libopenmpi-dev Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autoconf automake autotools-dev bsdmainutils cmake-data dh-apparmor dh-python dh-translations file gettext gettext-base groff-base hdf5-helpers intltool intltool-debian libarchive13 libasprintf0c2 libblas3 libcr0 libcroco3 libcurl3 libencode-locale-perl libexpat1 libexpat1-dev libfile-listing-perl libgfortran3 libglib2.0-0 libgsl0ldbl libhdf5-7 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhwloc-dev libhwloc5 libibverbs-dev libibverbs1 libio-html-perl libio-socket-ssl-perl libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack3 libltdl7 liblwp-mediatypes-perl liblwp-protocol-https-perl liblzo2-2 libmagic1 libmpdec2 libnet-http-perl libnet-ssleay-perl libnettle4 libnuma1 libopenmpi1.6 libpci-dev libpci3 libpipeline1 libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.4-minimal libpython3.4-stdlib libsigsegv2 libtorque2 libunistring0 liburi-perl libwww-perl libwww-robotrules-perl libxml-parser-perl libxml2 libxml2-dev m4 man-db mime-support netbase openmpi-common po-debconf python python-minimal python-pkg-resources python-scour python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.4 python3.4-minimal zlib1g-dev Suggested packages: autoconf2.13 autoconf-archive gnu-standards autoconf-doc libtool wamerican wordlist whois vacation codeblocks eclipse dh-make bsd-mailx mailx cvs-buildpackage devscripts-el gnuplot libauthen-sasl-perl libfile-desktopentry-perl libnet-smtp-ssl-perl libterm-size-perl libyaml-syck-perl mutt ssh-client svn-buildpackage w3m debian-keyring equivs libsoap-lite-perl apparmor-easyprof gettext-doc groff lrzip blcr-dkms gsl-ref-psdoc gsl-doc-pdf gsl-doc-info gsl-ref-html libhdf5-doc libdata-dump-perl libhwloc-contrib-plugins libcrypt-ssleay-perl libauthen-ntlm-perl pkg-config less www-browser libmail-box-perl python-doc python-tk gfortran python-nose python-numpy-dbg python-numpy-doc python-distribute python-distribute-doc python-rsvg python-cairo python2.7-doc binfmt-support python3-doc python3-tk python3.4-doc Recommended packages: at dctrl-tools dput dupload libdistro-info-perl libjson-perl libparse-debcontrol-perl lintian patchutils python3-debian python3-magic strace unzip wdiff wget curl libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info libhtml-format-perl libhwloc-plugins libio-socket-inet6-perl libio-socket-ip-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl xml-core libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autotools-dev bsdmainutils cdbs cmake cmake-data debhelper devscripts dh-apparmor dh-python dh-translations file gettext gettext-base groff-base hdf5-helpers intltool intltool-debian libarchive13 libasprintf0c2 libblas3 libcr0 libcroco3 libcurl3 libencode-locale-perl libexpat1 libexpat1-dev libfile-listing-perl libgfortran3 libglib2.0-0 libgsl0-dev libgsl0ldbl libhdf5-7 libhdf5-dev libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhwloc-dev libhwloc5 libibverbs-dev libibverbs1 libio-html-perl libio-socket-ssl-perl libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack3 libltdl7 liblwp-mediatypes-perl liblwp-protocol-https-perl liblzo2-2 libmagic1 libmpdec2 libnet-http-perl libnet-ssleay-perl libnettle4 libnuma1 libopenmpi-dev libopenmpi1.6 libpci-dev libpci3 libpipeline1 libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.4-minimal libpython3.4-stdlib libsigsegv2 libtorque2 libunistring0 liburi-perl libwww-perl libwww-robotrules-perl libxml-parser-perl libxml2 libxml2-dev m4 man-db mime-support netbase openmpi-common po-debconf python python-dev python-minimal python-numpy python-pkg-resources python-scour python-setuptools python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.4 python3.4-minimal zlib1g-dev 0 upgraded, 108 newly installed, 0 to remove and 0 not upgraded. Need to get 60.1 MB of archives. After this operation, 215 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1 amd64 2.1.0-4ubuntu1 [71.1 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty-security/main libmagic1 amd64 1:5.14-2ubuntu3.1 [184 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main libmpdec2 amd64 2.4.0-6 [79.4 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.4-minimal amd64 3.4.0-2ubuntu1 [444 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main mime-support all 3.54ubuntu1 [31.7 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.4-stdlib amd64 3.4.0-2ubuntu1 [2015 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main python3.4-minimal amd64 3.4.0-2ubuntu1 [1273 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty-updates/main libasprintf0c2 amd64 0.18.3.1-1ubuntu3 [6712 B] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main libglib2.0-0 amd64 2.40.0-2 [1057 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main libnuma1 amd64 2.0.9~rc5-1ubuntu2 [20.3 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main libpci3 amd64 1:3.2.1-1ubuntu5 [26.1 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main libpipeline1 amd64 1.3.0-1 [24.0 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty-security/main libxml2 amd64 2.9.1+dfsg1-3ubuntu4.3 [571 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main groff-base amd64 1.22.2-5 [1053 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main bsdmainutils amd64 9.0.5ubuntu1 [203 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main man-db amd64 2.6.7.1-1 [858 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty-security/main liblzo2-2 amd64 2.06-1.2ubuntu1.1 [46.1 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main libnettle4 amd64 2.7.1-1 [121 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty/main libarchive13 amd64 3.1.2-7ubuntu2 [259 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty/main libcroco3 amd64 0.6.8-2ubuntu1 [82.4 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty/main libcurl3 amd64 7.35.0-1ubuntu2 [172 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main libgfortran3 amd64 4.8.2-19ubuntu1 [250 kB] Get:23 http://ftpmaster.internal/ubuntu/ trusty/universe libhdf5-7 amd64 1.8.11-5ubuntu7 [1205 kB] Get:24 http://ftpmaster.internal/ubuntu/ trusty/main libjpeg-turbo8 amd64 1.3.0-0ubuntu2 [104 kB] Get:25 http://ftpmaster.internal/ubuntu/ trusty/main libltdl7 amd64 2.4.2-1.7ubuntu1 [35.0 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-minimal amd64 2.7.6-8 [307 kB] Get:27 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-stdlib amd64 2.7.6-8 [1872 kB] Get:28 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7 amd64 2.7.6-8 [1044 kB] Get:29 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1-dev amd64 2.1.0-4ubuntu1 [115 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-dev amd64 2.7.6-8 [22.0 MB] Get:31 http://ftpmaster.internal/ubuntu/ trusty/main libsigsegv2 amd64 2.10-2 [15.0 kB] Get:32 http://ftpmaster.internal/ubuntu/ trusty/main libunistring0 amd64 0.9.3-5ubuntu3 [271 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty/main python2.7-minimal amd64 2.7.6-8 [1190 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty/universe libhwloc5 amd64 1.8-1ubuntu1 [77.9 kB] Get:35 http://ftpmaster.internal/ubuntu/ trusty/main python3.4 amd64 3.4.0-2ubuntu1 [163 kB] Get:36 http://ftpmaster.internal/ubuntu/ trusty/main python3-minimal amd64 3.4.0-0ubuntu2 [23.2 kB] Get:37 http://ftpmaster.internal/ubuntu/ trusty/main libpython3-stdlib amd64 3.4.0-0ubuntu2 [6912 B] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main python3 amd64 3.4.0-0ubuntu2 [8666 B] Get:39 http://ftpmaster.internal/ubuntu/ trusty/main dh-python all 1.20140128-1ubuntu8 [51.0 kB] Get:40 http://ftpmaster.internal/ubuntu/ trusty-security/main file amd64 1:5.14-2ubuntu3.1 [18.8 kB] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main netbase all 5.2 [12.9 kB] Get:42 http://ftpmaster.internal/ubuntu/ trusty-updates/main gettext-base amd64 0.18.3.1-1ubuntu3 [48.8 kB] Get:43 http://ftpmaster.internal/ubuntu/ trusty/main m4 amd64 1.4.17-2ubuntu1 [195 kB] Get:44 http://ftpmaster.internal/ubuntu/ trusty/main autoconf all 2.69-6 [322 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main autotools-dev all 20130810.1 [44.3 kB] Get:46 http://ftpmaster.internal/ubuntu/ trusty/main automake all 1:1.14.1-2ubuntu1 [510 kB] Get:47 http://ftpmaster.internal/ubuntu/ trusty-updates/main gettext amd64 0.18.3.1-1ubuntu3 [829 kB] Get:48 http://ftpmaster.internal/ubuntu/ trusty/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:49 http://ftpmaster.internal/ubuntu/ trusty/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:50 http://ftpmaster.internal/ubuntu/ trusty/main dh-apparmor all 2.8.95~2430-0ubuntu5 [11.3 kB] Get:51 http://ftpmaster.internal/ubuntu/ trusty/main debhelper all 9.20131227ubuntu1 [604 kB] Get:52 http://ftpmaster.internal/ubuntu/ trusty/main liburi-perl all 1.60-1 [89.6 kB] Get:53 http://ftpmaster.internal/ubuntu/ trusty/main libencode-locale-perl all 1.03-1 [12.4 kB] Get:54 http://ftpmaster.internal/ubuntu/ trusty/main libhttp-date-perl all 6.02-1 [10.4 kB] Get:55 http://ftpmaster.internal/ubuntu/ trusty/main libfile-listing-perl all 6.04-1 [9774 B] Get:56 http://ftpmaster.internal/ubuntu/ trusty/main libhtml-tagset-perl all 3.20-2 [13.5 kB] Get:57 http://ftpmaster.internal/ubuntu/ trusty/main libhtml-parser-perl amd64 3.71-1build1 [98.2 kB] Get:58 http://ftpmaster.internal/ubuntu/ trusty/main libhtml-tree-perl all 5.03-1 [215 kB] Get:59 http://ftpmaster.internal/ubuntu/ trusty/main libio-html-perl all 1.00-1 [15.7 kB] Get:60 http://ftpmaster.internal/ubuntu/ trusty/main liblwp-mediatypes-perl all 6.02-1 [21.7 kB] Get:61 http://ftpmaster.internal/ubuntu/ trusty/main libhttp-message-perl all 6.06-1 [78.7 kB] Get:62 http://ftpmaster.internal/ubuntu/ trusty/main libhttp-cookies-perl all 6.00-2 [23.3 kB] Get:63 http://ftpmaster.internal/ubuntu/ trusty/main libhttp-negotiate-perl all 6.00-2 [13.4 kB] Get:64 http://ftpmaster.internal/ubuntu/ trusty/main libnet-ssleay-perl amd64 1.58-1 [243 kB] Get:65 http://ftpmaster.internal/ubuntu/ trusty/main libio-socket-ssl-perl all 1.965-1ubuntu1 [73.7 kB] Get:66 http://ftpmaster.internal/ubuntu/ trusty/main libnet-http-perl all 6.06-1 [24.2 kB] Get:67 http://ftpmaster.internal/ubuntu/ trusty-security/main liblwp-protocol-https-perl all 6.04-2ubuntu0.1 [7644 B] Get:68 http://ftpmaster.internal/ubuntu/ trusty/main libwww-robotrules-perl all 6.01-1 [14.1 kB] Get:69 http://ftpmaster.internal/ubuntu/ trusty/main libwww-perl all 6.05-2 [146 kB] Get:70 http://ftpmaster.internal/ubuntu/ trusty/main libxml-parser-perl amd64 2.41-1build3 [294 kB] Get:71 http://ftpmaster.internal/ubuntu/ trusty/main intltool all 0.50.2-2 [52.0 kB] Get:72 http://ftpmaster.internal/ubuntu/ trusty/main dh-translations all 121 [21.6 kB] Get:73 http://ftpmaster.internal/ubuntu/ trusty/main python2.7 amd64 2.7.6-8 [197 kB] Get:74 http://ftpmaster.internal/ubuntu/ trusty/main python-minimal amd64 2.7.5-5ubuntu3 [27.5 kB] Get:75 http://ftpmaster.internal/ubuntu/ trusty/main libpython-stdlib amd64 2.7.5-5ubuntu3 [7012 B] Get:76 http://ftpmaster.internal/ubuntu/ trusty/main python amd64 2.7.5-5ubuntu3 [134 kB] Get:77 http://ftpmaster.internal/ubuntu/ trusty/main python-scour all 0.26-3build1 [40.5 kB] Get:78 http://ftpmaster.internal/ubuntu/ trusty/main cdbs all 0.4.122ubuntu2 [42.1 kB] Get:79 http://ftpmaster.internal/ubuntu/ trusty/main cmake-data all 2.8.12.2-0ubuntu3 [676 kB] Get:80 http://ftpmaster.internal/ubuntu/ trusty/main cmake amd64 2.8.12.2-0ubuntu3 [2618 kB] Get:81 http://ftpmaster.internal/ubuntu/ trusty/main devscripts amd64 2.14.1 [791 kB] Get:82 http://ftpmaster.internal/ubuntu/ trusty/universe hdf5-helpers amd64 1.8.11-5ubuntu7 [12.1 kB] Get:83 http://ftpmaster.internal/ubuntu/ trusty/main libblas3 amd64 1.2.20110419-7 [215 kB] Get:84 http://ftpmaster.internal/ubuntu/ trusty/universe libcr0 amd64 0.8.5-2.1 [18.6 kB] Get:85 http://ftpmaster.internal/ubuntu/ trusty/main libgsl0ldbl amd64 1.16+dfsg-1ubuntu1 [878 kB] Get:86 http://ftpmaster.internal/ubuntu/ trusty/main libgsl0-dev amd64 1.16+dfsg-1ubuntu1 [982 kB] Get:87 http://ftpmaster.internal/ubuntu/ trusty/main zlib1g-dev amd64 1:1.2.8.dfsg-1ubuntu1 [183 kB] Get:88 http://ftpmaster.internal/ubuntu/ trusty/main libjpeg-turbo8-dev amd64 1.3.0-0ubuntu2 [242 kB] Get:89 http://ftpmaster.internal/ubuntu/ trusty/main libjpeg8 amd64 8c-2ubuntu8 [2194 B] Get:90 http://ftpmaster.internal/ubuntu/ trusty/main libjpeg8-dev amd64 8c-2ubuntu8 [1552 B] Get:91 http://ftpmaster.internal/ubuntu/ trusty/main libjpeg-dev amd64 8c-2ubuntu8 [1546 B] Get:92 http://ftpmaster.internal/ubuntu/ trusty/universe libhdf5-dev amd64 1.8.11-5ubuntu7 [4618 kB] Get:93 http://ftpmaster.internal/ubuntu/ trusty/main liblapack3 amd64 3.5.0-2ubuntu1 [1730 kB] Get:94 http://ftpmaster.internal/ubuntu/ trusty/main libpci-dev amd64 1:3.2.1-1ubuntu5 [43.9 kB] Get:95 http://ftpmaster.internal/ubuntu/ trusty/main libpython-dev amd64 2.7.5-5ubuntu3 [7078 B] Get:96 http://ftpmaster.internal/ubuntu/ trusty/universe libtorque2 amd64 2.4.16+dfsg-1.3ubuntu1 [76.3 kB] Get:97 http://ftpmaster.internal/ubuntu/ trusty-security/main libxml2-dev amd64 2.9.1+dfsg1-3ubuntu4.3 [630 kB] Get:98 http://ftpmaster.internal/ubuntu/ trusty/universe openmpi-common all 1.6.5-8 [101 kB] Get:99 http://ftpmaster.internal/ubuntu/ trusty/main python2.7-dev amd64 2.7.6-8 [269 kB] Get:100 http://ftpmaster.internal/ubuntu/ trusty/main python-dev amd64 2.7.5-5ubuntu3 [1166 B] Get:101 http://ftpmaster.internal/ubuntu/ trusty/main python-numpy amd64 1:1.8.1-1ubuntu1 [1604 kB] Get:102 http://ftpmaster.internal/ubuntu/ trusty/main python-pkg-resources all 3.3-1ubuntu1 [61.9 kB] Get:103 http://ftpmaster.internal/ubuntu/ trusty/main python-setuptools all 3.3-1ubuntu1 [230 kB] Get:104 http://ftpmaster.internal/ubuntu/ trusty/universe libhwloc-dev amd64 1.8-1ubuntu1 [130 kB] Get:105 http://ftpmaster.internal/ubuntu/ trusty/main libibverbs1 amd64 1.1.7-1ubuntu1 [23.3 kB] Get:106 http://ftpmaster.internal/ubuntu/ trusty/main libibverbs-dev amd64 1.1.7-1ubuntu1 [68.1 kB] Get:107 http://ftpmaster.internal/ubuntu/ trusty/universe libopenmpi1.6 amd64 1.6.5-8 [1396 kB] Get:108 http://ftpmaster.internal/ubuntu/ trusty/universe libopenmpi-dev amd64 1.6.5-8 [379 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 60.1 MB in 2s (21.6 MB/s) Selecting previously unselected package libexpat1:amd64. (Reading database ... 11788 files and directories currently installed.) Preparing to unpack .../libexpat1_2.1.0-4ubuntu1_amd64.deb ... Unpacking libexpat1:amd64 (2.1.0-4ubuntu1) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../libmagic1_1%3a5.14-2ubuntu3.1_amd64.deb ... Unpacking libmagic1:amd64 (1:5.14-2ubuntu3.1) ... Selecting previously unselected package libmpdec2:amd64. Preparing to unpack .../libmpdec2_2.4.0-6_amd64.deb ... Unpacking libmpdec2:amd64 (2.4.0-6) ... Selecting previously unselected package libpython3.4-minimal:amd64. Preparing to unpack .../libpython3.4-minimal_3.4.0-2ubuntu1_amd64.deb ... Unpacking libpython3.4-minimal:amd64 (3.4.0-2ubuntu1) ... Selecting previously unselected package mime-support. Preparing to unpack .../mime-support_3.54ubuntu1_all.deb ... Unpacking mime-support (3.54ubuntu1) ... Selecting previously unselected package libpython3.4-stdlib:amd64. 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Setting up libglib2.0-0:amd64 (2.40.0-2) ... No schema files found: doing nothing. Setting up libnuma1:amd64 (2.0.9~rc5-1ubuntu2) ... Setting up libpci3:amd64 (1:3.2.1-1ubuntu5) ... Setting up libpipeline1:amd64 (1.3.0-1) ... Setting up libxml2:amd64 (2.9.1+dfsg1-3ubuntu4.3) ... Setting up groff-base (1.22.2-5) ... Setting up bsdmainutils (9.0.5ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.6.7.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up liblzo2-2:amd64 (2.06-1.2ubuntu1.1) ... Setting up libnettle4:amd64 (2.7.1-1) ... Setting up libarchive13:amd64 (3.1.2-7ubuntu2) ... Setting up libcroco3:amd64 (0.6.8-2ubuntu1) ... Setting up libcurl3:amd64 (7.35.0-1ubuntu2) ... Setting up libgfortran3:amd64 (4.8.2-19ubuntu1) ... Setting up libhdf5-7:amd64 (1.8.11-5ubuntu7) ... Setting up libjpeg-turbo8:amd64 (1.3.0-0ubuntu2) ... Setting up libltdl7:amd64 (2.4.2-1.7ubuntu1) ... Setting up libpython2.7-minimal:amd64 (2.7.6-8) ... Setting up libpython2.7-stdlib:amd64 (2.7.6-8) ... Setting up libpython2.7:amd64 (2.7.6-8) ... Setting up libexpat1-dev:amd64 (2.1.0-4ubuntu1) ... Setting up libpython2.7-dev:amd64 (2.7.6-8) ... Setting up libsigsegv2:amd64 (2.10-2) ... Setting up libunistring0:amd64 (0.9.3-5ubuntu3) ... Setting up python2.7-minimal (2.7.6-8) ... Linking and byte-compiling packages for runtime python2.7... Setting up libhwloc5:amd64 (1.8-1ubuntu1) ... Setting up python3.4 (3.4.0-2ubuntu1) ... Setting up python3-minimal (3.4.0-0ubuntu2) ... Setting up libpython3-stdlib:amd64 (3.4.0-0ubuntu2) ... Setting up file (1:5.14-2ubuntu3.1) ... Setting up netbase (5.2) ... Setting up gettext-base (0.18.3.1-1ubuntu3) ... Setting up m4 (1.4.17-2ubuntu1) ... Setting up autoconf (2.69-6) ... Setting up autotools-dev (20130810.1) ... Setting up automake (1:1.14.1-2ubuntu1) ... update-alternatives: using /usr/bin/automake-1.14 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.18.3.1-1ubuntu3) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up dh-apparmor (2.8.95~2430-0ubuntu5) ... Setting up debhelper (9.20131227ubuntu1) ... Setting up liburi-perl (1.60-1) ... Setting up libencode-locale-perl (1.03-1) ... Setting up libhttp-date-perl (6.02-1) ... Setting up libfile-listing-perl (6.04-1) ... Setting up libhtml-tagset-perl (3.20-2) ... Setting up libhtml-parser-perl (3.71-1build1) ... Setting up libhtml-tree-perl (5.03-1) ... Setting up libio-html-perl (1.00-1) ... Setting up liblwp-mediatypes-perl (6.02-1) ... Setting up libhttp-message-perl (6.06-1) ... Setting up libhttp-cookies-perl (6.00-2) ... Setting up libhttp-negotiate-perl (6.00-2) ... Setting up libnet-ssleay-perl (1.58-1) ... Setting up libio-socket-ssl-perl (1.965-1ubuntu1) ... Setting up libnet-http-perl (6.06-1) ... Setting up libwww-robotrules-perl (6.01-1) ... Setting up python2.7 (2.7.6-8) ... Setting up python-minimal (2.7.5-5ubuntu3) ... Setting up libpython-stdlib:amd64 (2.7.5-5ubuntu3) ... Setting up python (2.7.5-5ubuntu3) ... Setting up python-scour (0.26-3build1) ... Setting up cmake-data (2.8.12.2-0ubuntu3) ... Setting up cmake (2.8.12.2-0ubuntu3) ... Setting up hdf5-helpers (1.8.11-5ubuntu7) ... Setting up libblas3 (1.2.20110419-7) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up libcr0 (0.8.5-2.1) ... Setting up libgsl0ldbl (1.16+dfsg-1ubuntu1) ... Setting up libgsl0-dev (1.16+dfsg-1ubuntu1) ... Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-1ubuntu1) ... Setting up libjpeg-turbo8-dev:amd64 (1.3.0-0ubuntu2) ... Setting up libjpeg8:amd64 (8c-2ubuntu8) ... Setting up libjpeg8-dev:amd64 (8c-2ubuntu8) ... Setting up libjpeg-dev:amd64 (8c-2ubuntu8) ... Setting up libhdf5-dev (1.8.11-5ubuntu7) ... Setting up liblapack3 (3.5.0-2ubuntu1) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libpci-dev (1:3.2.1-1ubuntu5) ... Setting up libpython-dev:amd64 (2.7.5-5ubuntu3) ... Setting up libtorque2 (2.4.16+dfsg-1.3ubuntu1) ... Setting up libxml2-dev:amd64 (2.9.1+dfsg1-3ubuntu4.3) ... Setting up openmpi-common (1.6.5-8) ... Setting up python2.7-dev (2.7.6-8) ... Setting up python-dev (2.7.5-5ubuntu3) ... Setting up python-numpy (1:1.8.1-1ubuntu1) ... Setting up python-pkg-resources (3.3-1ubuntu1) ... Setting up python-setuptools (3.3-1ubuntu1) ... Setting up libhwloc-dev:amd64 (1.8-1ubuntu1) ... Setting up libibverbs1 (1.1.7-1ubuntu1) ... Setting up libibverbs-dev (1.1.7-1ubuntu1) ... Setting up libopenmpi1.6 (1.6.5-8) ... Setting up libopenmpi-dev (1.6.5-8) ... update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode Setting up python3 (3.4.0-0ubuntu2) ... running python rtupdate hooks for python3.4... running python post-rtupdate hooks for python3.4... Setting up dh-python (1.20140128-1ubuntu8) ... Setting up liblwp-protocol-https-perl (6.04-2ubuntu0.1) ... Setting up libwww-perl (6.05-2) ... Setting up libxml-parser-perl (2.41-1build3) ... Setting up intltool (0.50.2-2) ... Setting up dh-translations (121) ... Setting up cdbs (0.4.122ubuntu2) ... Setting up devscripts (2.14.1) ... Processing triggers for libc-bin (2.19-0ubuntu6) ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.19-0ubuntu6 make_3.81-8.2ubuntu3 dpkg-dev_1.17.5ubuntu5.3 gcc-4.8_4.8.2-19ubuntu1 g++-4.8_4.8.2-19ubuntu1 binutils_2.24-5ubuntu3 libstdc++-4.8-dev_4.8.2-19ubuntu1 libstdc++6_4.8.2-19ubuntu1 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::Native dpkg-source: warning: extracting unsigned source package (moose_3.0-0~2918~ubuntu14.04.1.dsc) dpkg-source: info: extracting moose in moose-3.0 dpkg-source: info: unpacking moose_3.0-0~2918~ubuntu14.04.1.tar.gz dpkg-buildpackage: source package moose dpkg-buildpackage: source version 3.0-0~2918~ubuntu14.04.1 dpkg-buildpackage: source distribution trusty dpkg-source --before-build moose-3.0 dpkg-buildpackage: host architecture amd64 /usr/bin/fakeroot debian/rules clean test -x debian/rules rmdir obj-x86_64-linux-gnu rmdir: failed to remove 'obj-x86_64-linux-gnu': No such file or directory make: [cleanbuilddir] Error 1 (ignored) rm -f debian/stamp-makefile-build debian/stamp-makefile-install /usr/bin/make -C obj-x86_64-linux-gnu -k clean make: *** obj-x86_64-linux-gnu: No such file or directory. Stop. make: [makefile-clean] Error 2 (ignored) rm -rf obj-x86_64-linux-gnu dh_clean rm -rf debian/python-module-stampdir find "/build/buildd/moose-3.0" -name '*.py[co]' -delete find "/build/buildd/moose-3.0" -name __pycache__ -type d -empty -delete find "/build/buildd/moose-3.0" -prune -name '*.egg-info' -exec rm -rf '{}' ';' debian/rules build-arch test -x debian/rules mkdir -p "obj-x86_64-linux-gnu" /usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_PYTHON_BUILD_ARGS is a deprecated variable mkdir -p debian/python-module-stampdir cd obj-x86_64-linux-gnu && cmake /build/buildd/moose-3.0/. -DCMAKE_INSTALL_PREFIX="/usr" -DCMAKE_C_COMPILER:FILEPATH="cc" -DCMAKE_CXX_COMPILER:FILEPATH="g++" -DCMAKE_C_FLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -D_FORTIFY_SOURCE=2" -DCMAKE_CXX_FLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wall -D_FORTIFY_SOURCE=2" -DCMAKE_SKIP_RPATH=ON -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_EXE_LINKER_FLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" -DCMAKE_MODULE_LINKER_FLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" -DCMAKE_SHARED_LINKER_FLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" -- The C compiler identification is GNU 4.8.2 -- The CXX compiler identification is GNU 4.8.2 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done ++ Unit testing enabled. ++ Moose will print statistics during simulation /usr -- Using GSL from /usr -- Found: /usr/lib/x86_64-linux-gnu/libhdf5.so -- -- Could NOT find LIBSBML (missing: LIBSBML_LIBRARY LIBSBML_INCLUDE_DIR) -- Could NOT find Curses (missing: CURSES_LIBRARY CURSES_INCLUDE_PATH) -- Could NOT find Readline (missing: Readline_INCLUDE_DIR Readline_LIBRARY) -- Found PythonInterp: /usr/bin/python (found version "2.7.6") -- Found NumPy: version "1.8.1" /usr/lib/python2.7/dist-packages/numpy/core/include -- Found PythonDev: /usr/bin/python-config ++ PYTHONPATH is set to /build/buildd/moose-3.0/python -- Configuring done -- Generating done -- Build files have been written to: /build/buildd/moose-3.0/obj-x86_64-linux-gnu /usr/bin/make -C obj-x86_64-linux-gnu make[1]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[2]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target kinetics make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 1%] Building CXX object kinetics/CMakeFiles/kinetics.dir/PoolBase.cpp.o [ 2%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Pool.cpp.o [ 2%] Building CXX object kinetics/CMakeFiles/kinetics.dir/BufPool.cpp.o [ 3%] Building CXX object kinetics/CMakeFiles/kinetics.dir/FuncPool.cpp.o [ 3%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReacBase.cpp.o [ 4%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Reac.cpp.o [ 4%] Building CXX object kinetics/CMakeFiles/kinetics.dir/EnzBase.cpp.o [ 5%] Building CXX object kinetics/CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o [ 5%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Enz.cpp.o [ 6%] Building CXX object kinetics/CMakeFiles/kinetics.dir/MMenz.cpp.o [ 6%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Species.cpp.o [ 7%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReadKkit.cpp.o [ 7%] Building CXX object kinetics/CMakeFiles/kinetics.dir/WriteKkit.cpp.o [ 8%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReadCspace.cpp.o [ 8%] Building CXX object kinetics/CMakeFiles/kinetics.dir/SumTotalTerm.cpp.o [ 9%] Building CXX object kinetics/CMakeFiles/kinetics.dir/MathFuncTerm.cpp.o [ 9%] Building CXX object kinetics/CMakeFiles/kinetics.dir/FuncBase.cpp.o [ 10%] Building CXX object kinetics/CMakeFiles/kinetics.dir/MathFunc.cpp.o [ 10%] Building CXX object kinetics/CMakeFiles/kinetics.dir/SumFunc.cpp.o [ 11%] Building CXX object kinetics/CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o [ 11%] Building CXX object kinetics/CMakeFiles/kinetics.dir/testKinetics.cpp.o Linking CXX static library libkinetics.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 11%] Built target kinetics make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target basecode make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 12%] Building CXX object basecode/CMakeFiles/basecode.dir/consts.cpp.o [ 12%] Building CXX object 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object basecode/CMakeFiles/basecode.dir/Id.cpp.o [ 19%] Building CXX object basecode/CMakeFiles/basecode.dir/PrepackedBuffer.cpp.o [ 20%] Building CXX object basecode/CMakeFiles/basecode.dir/ObjId.cpp.o [ 20%] Building CXX object basecode/CMakeFiles/basecode.dir/global.cpp.o [ 21%] Building CXX object basecode/CMakeFiles/basecode.dir/SetGet.cpp.o [ 21%] Building CXX object basecode/CMakeFiles/basecode.dir/OpFuncBase.cpp.o [ 22%] Building CXX object basecode/CMakeFiles/basecode.dir/EpFunc.cpp.o [ 23%] Building CXX object basecode/CMakeFiles/basecode.dir/HopFunc.cpp.o [ 23%] Building CXX object basecode/CMakeFiles/basecode.dir/SparseMatrix.cpp.o [ 24%] Building CXX object basecode/CMakeFiles/basecode.dir/doubleEq.cpp.o [ 24%] Building CXX object basecode/CMakeFiles/basecode.dir/testAsync.cpp.o Linking CXX static library libbasecode.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 24%] Built target basecode make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target utility make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 25%] Building CXX object utility/CMakeFiles/utility.dir/strutil.cpp.o [ 25%] Building CXX object utility/CMakeFiles/utility.dir/types.cpp.o [ 26%] Building CXX object utility/CMakeFiles/utility.dir/setupenv.cpp.o [ 26%] Building CXX object utility/CMakeFiles/utility.dir/numutil.cpp.o [ 27%] Building CXX object utility/CMakeFiles/utility.dir/Annotator.cpp.o [ 28%] Building CXX object utility/CMakeFiles/utility.dir/Vec.cpp.o Linking CXX static library libutility.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 28%] Built target utility make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target biophysics make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 29%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SpikeRingBuffer.cpp.o [ 29%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SynHandler.cpp.o [ 30%] Building CXX object biophysics/CMakeFiles/biophysics.dir/IntFire.cpp.o [ 30%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Synapse.cpp.o [ 31%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SpikeGen.cpp.o [ 31%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o [ 32%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CompartmentBase.cpp.o [ 32%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Compartment.cpp.o [ 33%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SymCompartment.cpp.o [ 33%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ChanBase.cpp.o [ 34%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannel.cpp.o [ 34%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHGate.cpp.o [ 35%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHGate2D.cpp.o [ 35%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannel2D.cpp.o [ 36%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CaConcBase.cpp.o [ 37%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CaConc.cpp.o [ 37%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MgBlock.cpp.o [ 38%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Neuron.cpp.o [ 38%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ReadCell.cpp.o [ 39%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SynChanBase.cpp.o [ 39%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SynChan.cpp.o [ 40%] Building CXX object biophysics/CMakeFiles/biophysics.dir/testBiophysics.cpp.o [ 40%] Building CXX object biophysics/CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o [ 41%] Building CXX object biophysics/CMakeFiles/biophysics.dir/DifShell.cpp.o [ 41%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Leakage.cpp.o [ 42%] Building CXX object biophysics/CMakeFiles/biophysics.dir/VectorTable.cpp.o [ 42%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o [ 43%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovChannel.cpp.o [ 43%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o [ 44%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MatrixOps.cpp.o /build/buildd/moose-3.0/biophysics/MatrixOps.cpp: In function 'void matInv(Matrix*, std::vector*, Matrix*)': /build/buildd/moose-3.0/biophysics/MatrixOps.cpp:350:9: warning: variable 'pivot' set but not used [-Wunused-but-set-variable] double pivot, rowMultiplier1, rowMultiplier2; ^ /build/buildd/moose-3.0/biophysics/MatrixOps.cpp: In function 'void matMatAdd(Matrix*, Matrix*, double, double, unsigned int)': /build/buildd/moose-3.0/biophysics/MatrixOps.cpp:128:10: warning: 'C' may be used uninitialized in this function [-Wmaybe-uninitialized] Matrix *C; ^ [ 44%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o /build/buildd/moose-3.0/biophysics/MarkovSolverBase.cpp: In member function 'void MarkovSolverBase::computeState()': /build/buildd/moose-3.0/biophysics/MarkovSolverBase.cpp:444:28: warning: variable 'useLinear' set but not used [-Wunused-but-set-variable] bool useBilinear = false, useLinear = false; ^ [ 45%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovSolver.cpp.o /build/buildd/moose-3.0/biophysics/MarkovSolver.cpp: In member function 'Matrix* MarkovSolver::computePadeApproximant(Matrix*, unsigned int)': /build/buildd/moose-3.0/biophysics/MarkovSolver.cpp:88:10: warning: 'padeCoeffs' may be used uninitialized in this function [-Wmaybe-uninitialized] double *padeCoeffs; ^ [ 45%] Building CXX object biophysics/CMakeFiles/biophysics.dir/VClamp.cpp.o [ 46%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Nernst.cpp.o Linking CXX static library libbiophysics.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 46%] Built target biophysics make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target moosepython make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 46%] Building CXX object pymoose/CMakeFiles/moosepython.dir/vec.cpp.o In file included from /usr/include/python2.7/Python.h:80:0, from /build/buildd/moose-3.0/pymoose/vec.cpp:49: /build/buildd/moose-3.0/pymoose/vec.cpp: In function 'PyObject* moose_Id_richCompare(_Id*, PyObject*, int)': /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/vec.cpp:705:13: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/vec.cpp:707:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ [ 47%] Building CXX object pymoose/CMakeFiles/moosepython.dir/mfield.cpp.o [ 47%] Building CXX object pymoose/CMakeFiles/moosepython.dir/pymooseinit.cpp.o [ 48%] Building CXX object pymoose/CMakeFiles/moosepython.dir/melement.cpp.o In file included from /usr/include/python2.7/Python.h:80:0, from /build/buildd/moose-3.0/pymoose/melement.cpp:49: /build/buildd/moose-3.0/pymoose/melement.cpp: In function 'PyObject* moose_ObjId_getattro(_ObjId*, PyObject*)': /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /build/buildd/moose-3.0/pymoose/melement.cpp:642:21: note: in expansion of macro 'Py_INCREF' Py_INCREF(Py_True); ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /build/buildd/moose-3.0/pymoose/melement.cpp:645:21: note: in expansion of macro 'Py_INCREF' Py_INCREF(Py_False); ^ /build/buildd/moose-3.0/pymoose/melement.cpp: In function 'PyObject* moose_ObjId_setDestField(_ObjId*, PyObject*)': /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/melement.cpp:1382:21: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/melement.cpp:1384:21: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/melement.cpp: In function 'PyObject* setDestFinfo(ObjId, std::string, PyObject*, std::string)': /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/melement.cpp:1521:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/melement.cpp:1523:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/melement.cpp: In function 'PyObject* moose_ObjId_richcompare(_ObjId*, PyObject*, int)': /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/melement.cpp:1825:17: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/melement.cpp:1827:17: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/melement.cpp:1849:17: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/melement.cpp:1851:13: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/melement.cpp:1854:17: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/melement.cpp:1856:13: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/melement.cpp:1859:17: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/melement.cpp:1861:13: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ In file included from /usr/include/python2.7/Python.h:87:0, from /build/buildd/moose-3.0/pymoose/melement.cpp:49: /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* _set_vector_destFinfo(ObjId, std::string, PyObject*, char) [with A = int; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1485:84: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:571:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:573:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* _set_vector_destFinfo(ObjId, std::string, PyObject*, char) [with A = short int; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1488:86: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:571:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:573:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* _set_vector_destFinfo(ObjId, std::string, PyObject*, char) [with A = long int; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1491:85: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:571:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:573:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* _set_vector_destFinfo(ObjId, std::string, PyObject*, char) [with A = unsigned int; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1494:93: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:571:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:573:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* _set_vector_destFinfo(ObjId, std::string, PyObject*, char) [with A = long unsigned int; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1497:94: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:571:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:573:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* _set_vector_destFinfo(ObjId, std::string, PyObject*, char) [with A = float; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1500:86: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:571:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:573:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* _set_vector_destFinfo(ObjId, std::string, PyObject*, char) [with A = double; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1503:87: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:571:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:573:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* _set_vector_destFinfo(ObjId, std::string, PyObject*, char) [with A = std::basic_string; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1506:87: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:571:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:573:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* _set_vector_destFinfo(ObjId, std::string, PyObject*, char) [with A = Id; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1509:83: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:571:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:573:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* _set_vector_destFinfo(ObjId, std::string, PyObject*, char) [with A = ObjId; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1512:86: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:571:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:573:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* setDestFinfo1(ObjId, std::string, PyObject*, char, A) [with A = float; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1540:86: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:689:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:691:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* setDestFinfo1(ObjId, std::string, PyObject*, char, A) [with A = double; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1542:80: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:689:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:691:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* setDestFinfo1(ObjId, std::string, PyObject*, char, A) [with A = std::basic_string; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1547:84: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:689:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:691:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* setDestFinfo1(ObjId, std::string, PyObject*, char, A) [with A = int; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1555:83: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:689:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:691:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* setDestFinfo1(ObjId, std::string, PyObject*, char, A) [with A = long int; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1557:79: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:689:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:691:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* setDestFinfo1(ObjId, std::string, PyObject*, char, A) [with A = unsigned int; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1566:101: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:689:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:691:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* setDestFinfo1(ObjId, std::string, PyObject*, char, A) [with A = long unsigned int; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1568:88: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:689:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:691:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* setDestFinfo1(ObjId, std::string, PyObject*, char, A) [with A = Id; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1590:73: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:689:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:691:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* setDestFinfo1(ObjId, std::string, PyObject*, char, A) [with A = ObjId; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1611:76: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:689:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:691:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.h: In instantiation of 'PyObject* setDestFinfo1(ObjId, std::string, PyObject*, char, A) [with A = char; PyObject = _object; std::string = std::basic_string]': /build/buildd/moose-3.0/pymoose/melement.cpp:1624:78: required from here /usr/include/python2.7/boolobject.h:24:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_True ((PyObject *) &_Py_TrueStruct) ^ /usr/include/python2.7/boolobject.h:27:51: note: in expansion of macro 'Py_True' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:689:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/boolobject.h:23:47: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] #define Py_False ((PyObject *) &_Py_ZeroStruct) ^ /usr/include/python2.7/boolobject.h:28:53: note: in expansion of macro 'Py_False' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.h:691:9: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ [ 48%] Building CXX object pymoose/CMakeFiles/moosepython.dir/test_moosemodule.cpp.o Linking CXX static library libmoosepython.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 48%] Built target moosepython make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target msg make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 49%] Building CXX object msg/CMakeFiles/msg.dir/Msg.cpp.o [ 49%] Building CXX object msg/CMakeFiles/msg.dir/DiagonalMsg.cpp.o [ 50%] Building CXX object msg/CMakeFiles/msg.dir/OneToAllMsg.cpp.o [ 50%] Building CXX object msg/CMakeFiles/msg.dir/OneToOneMsg.cpp.o [ 51%] Building CXX object msg/CMakeFiles/msg.dir/SingleMsg.cpp.o [ 51%] Building CXX object msg/CMakeFiles/msg.dir/SparseMsg.cpp.o [ 52%] Building CXX object msg/CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o [ 52%] Building CXX object msg/CMakeFiles/msg.dir/testMsg.cpp.o Linking CXX static library libmsg.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 52%] Built target msg make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target shell make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 52%] Building CXX object shell/CMakeFiles/shell.dir/Shell.cpp.o /build/buildd/moose-3.0/shell/Shell.cpp: In member function 'void Shell::innerCreate(std::string, ObjId, Id, std::string, const NodeBalance&, unsigned int)': /build/buildd/moose-3.0/shell/Shell.cpp:741:16: warning: 'ret' may be used uninitialized in this function [-Wmaybe-uninitialized] assert( ret ); ^ [ 53%] Building CXX object shell/CMakeFiles/shell.dir/ShellCopy.cpp.o [ 53%] Building CXX object shell/CMakeFiles/shell.dir/ShellThreads.cpp.o [ 54%] Building CXX object shell/CMakeFiles/shell.dir/LoadModels.cpp.o [ 54%] Building CXX object shell/CMakeFiles/shell.dir/SaveModels.cpp.o [ 55%] Building CXX object shell/CMakeFiles/shell.dir/Neutral.cpp.o [ 55%] Building CXX object shell/CMakeFiles/shell.dir/Wildcard.cpp.o [ 56%] Building CXX object shell/CMakeFiles/shell.dir/testShell.cpp.o Linking CXX static library libshell.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 56%] Built target shell make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target randnum make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 57%] Building CXX object randnum/CMakeFiles/randnum.dir/mt19937ar.cpp.o Linking CXX static library librandnum.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 57%] Built target randnum make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target scheduling make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 57%] Building CXX object scheduling/CMakeFiles/scheduling.dir/testScheduling.cpp.o [ 58%] Building CXX object scheduling/CMakeFiles/scheduling.dir/Clock.cpp.o Linking CXX static library libscheduling.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 58%] Built target scheduling make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target moose_builtins make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 58%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Arith.cpp.o [ 59%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Group.cpp.o [ 59%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Mstring.cpp.o [ 60%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Func.cpp.o [ 60%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/TableBase.cpp.o [ 61%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Table.cpp.o [ 61%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/TimeTable.cpp.o [ 62%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Stats.cpp.o [ 62%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o [ 63%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o [ 63%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o [ 64%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o [ 64%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o Linking CXX static library libmoose_builtins.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 64%] Built target moose_builtins make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target muparser make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 65%] Building CXX object external/muparser/CMakeFiles/muparser.dir/muParserError.cpp.o [ 65%] Building CXX object external/muparser/CMakeFiles/muparser.dir/muParserTokenReader.cpp.o [ 66%] Building CXX object external/muparser/CMakeFiles/muparser.dir/muParserBase.cpp.o [ 66%] Building CXX object external/muparser/CMakeFiles/muparser.dir/muParserInt.cpp.o [ 67%] Building CXX object external/muparser/CMakeFiles/muparser.dir/muParserTest.cpp.o [ 67%] Building CXX object external/muparser/CMakeFiles/muparser.dir/muParserDLL.cpp.o [ 68%] Building CXX object external/muparser/CMakeFiles/muparser.dir/muParserCallback.cpp.o [ 69%] Building CXX object external/muparser/CMakeFiles/muparser.dir/muParser.cpp.o [ 69%] Building CXX object external/muparser/CMakeFiles/muparser.dir/muParserBytecode.cpp.o Linking CXX static library libmuparser.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 69%] Built target muparser make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target tinyxml make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 69%] Building CXX object external/tinyxml/CMakeFiles/tinyxml.dir/tinyxml2.cpp.o Linking CXX static library libtinyxml.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 69%] Built target tinyxml make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target mesh make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 69%] Building CXX object mesh/CMakeFiles/mesh.dir/ChemCompt.cpp.o [ 70%] Building CXX object mesh/CMakeFiles/mesh.dir/MeshCompt.cpp.o [ 70%] Building CXX object mesh/CMakeFiles/mesh.dir/MeshEntry.cpp.o [ 71%] Building CXX object mesh/CMakeFiles/mesh.dir/CubeMesh.cpp.o [ 71%] Building CXX object mesh/CMakeFiles/mesh.dir/CylBase.cpp.o [ 72%] Building CXX object mesh/CMakeFiles/mesh.dir/CylMesh.cpp.o [ 73%] Building CXX object mesh/CMakeFiles/mesh.dir/NeuroNode.cpp.o [ 73%] Building CXX object mesh/CMakeFiles/mesh.dir/NeuroMesh.cpp.o [ 74%] Building CXX object mesh/CMakeFiles/mesh.dir/SpineEntry.cpp.o [ 74%] Building CXX object mesh/CMakeFiles/mesh.dir/SpineMesh.cpp.o [ 75%] Building CXX object mesh/CMakeFiles/mesh.dir/PsdMesh.cpp.o [ 75%] Building CXX object mesh/CMakeFiles/mesh.dir/testMesh.cpp.o Linking CXX static library libmesh.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 75%] Built target mesh make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target moose_mpi make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 76%] Building CXX object mpi/CMakeFiles/moose_mpi.dir/PostMaster.cpp.o [ 77%] Building CXX object mpi/CMakeFiles/moose_mpi.dir/testMpi.cpp.o Linking CXX static library libmoose_mpi.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 77%] Built target moose_mpi make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target signeur make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 77%] Building CXX object signeur/CMakeFiles/signeur.dir/Adaptor.cpp.o [ 78%] Building CXX object signeur/CMakeFiles/signeur.dir/testSigNeur.cpp.o Linking CXX static library libsigneur.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 78%] Built target signeur make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target ksolve make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 79%] Building CXX object ksolve/CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o [ 80%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombiePool.cpp.o [ 80%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o [ 81%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieFuncPool.cpp.o [ 81%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieReac.cpp.o [ 82%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieEnz.cpp.o [ 82%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o [ 83%] Building CXX object ksolve/CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o [ 83%] Building CXX object ksolve/CMakeFiles/ksolve.dir/VoxelPools.cpp.o [ 84%] Building CXX object ksolve/CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o [ 84%] Building CXX object ksolve/CMakeFiles/ksolve.dir/RateTerm.cpp.o [ 85%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Stoich.cpp.o [ 85%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Ksolve.cpp.o [ 86%] Building CXX object ksolve/CMakeFiles/ksolve.dir/SteadyState.cpp.o [ 86%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Gsolve.cpp.o [ 87%] Building CXX object ksolve/CMakeFiles/ksolve.dir/testKsolve.cpp.o Linking CXX static library libksolve.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 87%] Built target ksolve make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target hsolve make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 88%] Building CXX object hsolve/CMakeFiles/hsolve.dir/Cell.cpp.o [ 88%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HinesMatrix.cpp.o [ 89%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveActive.cpp.o [ 89%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o [ 90%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolve.cpp.o [ 90%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveInterface.cpp.o [ 91%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolvePassive.cpp.o [ 91%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveStruct.cpp.o [ 92%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveUtils.cpp.o [ 92%] Building CXX object hsolve/CMakeFiles/hsolve.dir/RateLookup.cpp.o [ 93%] Building CXX object hsolve/CMakeFiles/hsolve.dir/testHSolve.cpp.o [ 93%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o [ 94%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o [ 94%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o Linking CXX static library libhsolve.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 94%] Built target hsolve make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target diffusion make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 95%] Building CXX object diffusion/CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o [ 95%] Building CXX object diffusion/CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o [ 96%] Building CXX object diffusion/CMakeFiles/diffusion.dir/Dsolve.cpp.o /build/buildd/moose-3.0/diffusion/Dsolve.cpp: In member function 'void Dsolve::makePoolMapFromElist(const std::vector&, std::vector&)': /build/buildd/moose-3.0/diffusion/Dsolve.cpp:366:29: warning: 'maxId' may be used uninitialized in this function [-Wmaybe-uninitialized] poolMap_.resize( 1 + maxId - minId ); ^ /build/buildd/moose-3.0/diffusion/Dsolve.cpp:370:19: warning: 'minId' may be used uninitialized in this function [-Wmaybe-uninitialized] assert( idValue - minId < poolMap_.size() ); ^ [ 96%] Building CXX object diffusion/CMakeFiles/diffusion.dir/testDiffusion.cpp.o Linking CXX static library libdiffusion.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 96%] Built target diffusion make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target device make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 96%] Building CXX object device/CMakeFiles/device.dir/PulseGen.cpp.o [ 97%] Building CXX object device/CMakeFiles/device.dir/DiffAmp.cpp.o [ 98%] Building CXX object device/CMakeFiles/device.dir/PIDController.cpp.o [ 98%] Building CXX object device/CMakeFiles/device.dir/RC.cpp.o Linking CXX static library libdevice.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 98%] Built target device make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target benchmarks make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 99%] Building CXX object benchmarks/CMakeFiles/benchmarks.dir/benchmarks.cpp.o [ 99%] Building CXX object benchmarks/CMakeFiles/benchmarks.dir/kineticMarks.cpp.o Linking CXX static library libbenchmarks.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 99%] Built target benchmarks make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target _moose make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 99%] Building CXX object CMakeFiles/_moose.dir/pymoose/moosemodule.cpp.o In file included from /usr/include/python2.7/Python.h:80:0, from /build/buildd/moose-3.0/pymoose/moosemodule.cpp:78: /build/buildd/moose-3.0/pymoose/moosemodule.cpp: In function 'PyObject* to_py(void*, char)': /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^ /build/buildd/moose-3.0/pymoose/moosemodule.cpp:370:21: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^ /build/buildd/moose-3.0/pymoose/moosemodule.cpp:372:21: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^ /build/buildd/moose-3.0/pymoose/moosemodule.cpp: In function 'void init_moose()': /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /build/buildd/moose-3.0/pymoose/moosemodule.cpp:2762:9: note: in expansion of macro 'Py_INCREF' Py_INCREF(&IdType); ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /build/buildd/moose-3.0/pymoose/moosemodule.cpp:2772:9: note: in expansion of macro 'Py_INCREF' Py_INCREF(&ObjIdType); ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /build/buildd/moose-3.0/pymoose/moosemodule.cpp:2782:9: note: in expansion of macro 'Py_INCREF' Py_INCREF(&moose_LookupField); ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /build/buildd/moose-3.0/pymoose/moosemodule.cpp:2789:9: note: in expansion of macro 'Py_INCREF' Py_INCREF(&moose_ElementField); ^ /usr/include/python2.7/object.h:767:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ^ /build/buildd/moose-3.0/pymoose/moosemodule.cpp:2801:9: note: in expansion of macro 'Py_INCREF' Py_INCREF(&moose_DestField); ^ Linking CXX shared library ../python/moose/_moose.so make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 99%] Built target _moose make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target moose.bin make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [100%] Building CXX object CMakeFiles/moose.bin.dir/basecode/main.cpp.o Linking CXX executable moose.bin make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [100%] Built target moose.bin make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target simplelogger make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Linking CXX static library libsimplelogger.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [100%] Built target simplelogger make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Scanning dependencies of target simpletest make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Linking CXX static library libsimpletest.a make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [100%] Built target simpletest make[2]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[1]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' touch debian/stamp-makefile-build DEB_MAKE_CHECK_TARGET unset, not running checks /usr/bin/fakeroot debian/rules binary-arch test -x debian/rules dh_testroot dh_prep dh_installdirs -A mkdir -p "obj-x86_64-linux-gnu" /usr/share/cdbs/1/rules/buildcore.mk:109: WARNING: DEB_PYTHON_BUILD_ARGS is a deprecated variable mkdir -p debian/python-module-stampdir DEB_MAKE_CHECK_TARGET unset, not running checks /usr/bin/make -C obj-x86_64-linux-gnu install DESTDIR=/build/buildd/moose-3.0/debian/moose/ make[1]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[2]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 11%] Built target kinetics make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 24%] Built target basecode make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 28%] Built target utility make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 46%] Built target biophysics make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 48%] Built target moosepython make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 52%] Built target msg make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 56%] Built target shell make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 57%] Built target randnum make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 58%] Built target scheduling make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 64%] Built target moose_builtins make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 69%] Built target muparser make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 69%] Built target tinyxml make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 75%] Built target mesh make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 77%] Built target moose_mpi make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 78%] Built target signeur make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 87%] Built target ksolve make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 94%] Built target hsolve make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 96%] Built target diffusion make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 98%] Built target device make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 99%] Built target benchmarks make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [ 99%] Built target _moose make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [100%] Built target moose.bin make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [100%] Built target simplelogger make[3]: Entering directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' make[3]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' [100%] Built target simpletest make[2]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' Install the project... -- Install configuration: "distribution" -- Installing: /build/buildd/moose-3.0/debian/moose/usr/bin/moose.bin -- Installing: /build/buildd/moose-3.0/debian/moose/usr/bin/moose CPACK_TEMPORARY_INSTALL_DIRECTORY ++ Installing python scripts: /usr +++ Updating PYTHONPATH: /usr/lib/python2.7/dist-packages +++ Creating directory /usr/lib/python2.7/dist-packages running build_py creating /tmp/lib.linux-x86_64-2.7 creating /tmp/lib.linux-x86_64-2.7/libmumbl copying libmumbl/__init__.py -> /tmp/lib.linux-x86_64-2.7/libmumbl copying libmumbl/main.py -> /tmp/lib.linux-x86_64-2.7/libmumbl copying libmumbl/util.py -> /tmp/lib.linux-x86_64-2.7/libmumbl creating /tmp/lib.linux-x86_64-2.7/moose copying moose/verification_utils.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/hdfutil.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/plot_utils.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/moose_py3k.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/__init__.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/graph_utils.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/graphutil.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/constants.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/utils.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/mtypes.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/sim_utils.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/moose.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/alternate.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/moose_config.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/methods_utils.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/print_utils.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/moose_constants.py -> /tmp/lib.linux-x86_64-2.7/moose copying moose/recording.py -> /tmp/lib.linux-x86_64-2.7/moose creating /tmp/lib.linux-x86_64-2.7/moose/neuroml copying moose/neuroml/MorphML.py -> /tmp/lib.linux-x86_64-2.7/moose/neuroml copying moose/neuroml/__init__.py -> /tmp/lib.linux-x86_64-2.7/moose/neuroml copying moose/neuroml/NetworkML.py -> /tmp/lib.linux-x86_64-2.7/moose/neuroml copying moose/neuroml/utils.py -> /tmp/lib.linux-x86_64-2.7/moose/neuroml copying moose/neuroml/NeuroML.py -> /tmp/lib.linux-x86_64-2.7/moose/neuroml copying moose/neuroml/ChannelML.py -> /tmp/lib.linux-x86_64-2.7/moose/neuroml creating /tmp/lib.linux-x86_64-2.7/moose/backend copying moose/backend/__init__.py -> /tmp/lib.linux-x86_64-2.7/moose/backend copying moose/backend/graphviz.py -> /tmp/lib.linux-x86_64-2.7/moose/backend copying moose/backend/spice.py -> /tmp/lib.linux-x86_64-2.7/moose/backend copying moose/backend/backend.py -> /tmp/lib.linux-x86_64-2.7/moose/backend creating /tmp/lib.linux-x86_64-2.7/mgui copying mgui/shell.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/mexception.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/__init__.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/newmodeldialog.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/configwidget.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/biomodelsclient.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/mplot.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/mgui.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/mload.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/mtree.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/mtoolbutton.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/checkcombobox.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/defaults.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/utils.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/loaderdialog.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/objectedit.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/msearch.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/mplugin.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/scishell.py -> /tmp/lib.linux-x86_64-2.7/mgui copying mgui/config.py -> /tmp/lib.linux-x86_64-2.7/mgui creating /tmp/lib.linux-x86_64-2.7/mgui/plugins copying mgui/plugins/kkitOrdinateUtil.py -> /tmp/lib.linux-x86_64-2.7/mgui/plugins copying mgui/plugins/__init__.py -> /tmp/lib.linux-x86_64-2.7/mgui/plugins copying mgui/plugins/modelBuild.py -> /tmp/lib.linux-x86_64-2.7/mgui/plugins copying mgui/plugins/test_plotwidget.py -> /tmp/lib.linux-x86_64-2.7/mgui/plugins copying mgui/plugins/kkitUtil.py -> /tmp/lib.linux-x86_64-2.7/mgui/plugins copying mgui/plugins/kkitViewcontrol.py -> /tmp/lib.linux-x86_64-2.7/mgui/plugins copying mgui/plugins/buildkkit.py -> /tmp/lib.linux-x86_64-2.7/mgui/plugins copying mgui/plugins/default.py -> /tmp/lib.linux-x86_64-2.7/mgui/plugins copying mgui/plugins/kkitQGraphics.py -> /tmp/lib.linux-x86_64-2.7/mgui/plugins copying mgui/plugins/kkit.py -> /tmp/lib.linux-x86_64-2.7/mgui/plugins copying mgui/plugins/kkitCalcArrow.py -> /tmp/lib.linux-x86_64-2.7/mgui/plugins copying moose/_moose.so -> /tmp/lib.linux-x86_64-2.7/moose copying mgui/moosegui -> /tmp/lib.linux-x86_64-2.7/mgui creating /tmp/lib.linux-x86_64-2.7/mgui/bioModels copying mgui/bioModels/getModelsIdByChEBI.pkl -> /tmp/lib.linux-x86_64-2.7/mgui/bioModels copying mgui/bioModels/getModelsIdByChEBIId.pkl -> /tmp/lib.linux-x86_64-2.7/mgui/bioModels copying mgui/bioModels/getAllCuratedModelsId.pkl -> /tmp/lib.linux-x86_64-2.7/mgui/bioModels creating /tmp/lib.linux-x86_64-2.7/mgui/icons copying mgui/icons/arrow.png -> /tmp/lib.linux-x86_64-2.7/mgui/icons copying mgui/icons/continue.png -> /tmp/lib.linux-x86_64-2.7/mgui/icons copying mgui/icons/reset.png -> /tmp/lib.linux-x86_64-2.7/mgui/icons copying mgui/icons/hopfield.png -> /tmp/lib.linux-x86_64-2.7/mgui/icons copying mgui/icons/QMdiBackground.png -> /tmp/lib.linux-x86_64-2.7/mgui/icons copying mgui/icons/moose_icon_large.png -> /tmp/lib.linux-x86_64-2.7/mgui/icons copying mgui/icons/moose_icon.png -> /tmp/lib.linux-x86_64-2.7/mgui/icons copying mgui/icons/help.png -> /tmp/lib.linux-x86_64-2.7/mgui/icons copying mgui/icons/squid.png -> /tmp/lib.linux-x86_64-2.7/mgui/icons copying mgui/icons/run.png -> /tmp/lib.linux-x86_64-2.7/mgui/icons creating /tmp/lib.linux-x86_64-2.7/mgui/colormaps copying mgui/colormaps/fire -> /tmp/lib.linux-x86_64-2.7/mgui/colormaps copying mgui/colormaps/grey -> /tmp/lib.linux-x86_64-2.7/mgui/colormaps copying mgui/colormaps/greenfire -> /tmp/lib.linux-x86_64-2.7/mgui/colormaps copying mgui/colormaps/heat -> /tmp/lib.linux-x86_64-2.7/mgui/colormaps copying mgui/colormaps/rainbow2.pkl -> /tmp/lib.linux-x86_64-2.7/mgui/colormaps copying mgui/colormaps/redhot -> /tmp/lib.linux-x86_64-2.7/mgui/colormaps copying mgui/colormaps/jet -> /tmp/lib.linux-x86_64-2.7/mgui/colormaps copying mgui/plugins/list.txt -> /tmp/lib.linux-x86_64-2.7/mgui/plugins running build running install error: can't create or remove files in install directory The following error occurred while trying to add or remove files in the installation directory: [Errno 13] Permission denied: '/usr/lib/python2.7/dist-packages/test-easy-install-7807.write-test' The installation directory you specified (via --install-dir, --prefix, or the distutils default setting) was: /usr/lib/python2.7/dist-packages/ Perhaps your account does not have write access to this directory? If the installation directory is a system-owned directory, you may need to sign in as the administrator or "root" account. If you do not have administrative access to this machine, you may wish to choose a different installation directory, preferably one that is listed in your PYTHONPATH environment variable. For information on other options, you may wish to consult the documentation at: https://pythonhosted.org/setuptools/easy_install.html Please make the appropriate changes for your system and try again. -- Installing: /build/buildd/moose-3.0/debian/moose/usr/bin/moosegui make[1]: Leaving directory `/build/buildd/moose-3.0/obj-x86_64-linux-gnu' touch debian/stamp-makefile-install Adding cdbs dependencies to debian/moose.substvars dh_installdirs -pmoose dh_installdocs -pmoose ./README dh_installexamples -pmoose dh_installman -pmoose dh_installinfo -pmoose dh_installmenu -pmoose dh_installcron -pmoose dh_installinit -pmoose dh_installdebconf -pmoose dh_installemacsen -pmoose dh_installcatalogs -pmoose dh_installpam -pmoose dh_installlogrotate -pmoose dh_installlogcheck -pmoose dh_installchangelogs -pmoose dh_installudev -pmoose dh_lintian -pmoose dh_bugfiles -pmoose dh_install -pmoose dh_link -pmoose dh_installmime -pmoose dh_installgsettings -pmoose dh_strip -pmoose dh_strip debug symbol extraction: disabling for PPA build dh_strip debug symbol extraction: not enabling -a because /CurrentlyBuilding exists dh_strip debug symbol extraction: not doing anything since NO_PKG_MANGLE is given dh_compress -pmoose dh_fixperms -pmoose dh_makeshlibs -pmoose dh_installdeb -pmoose dh_perl -pmoose dh_shlibdeps -pmoose dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/moose/usr/bin/moose.bin debian/moose/usr/share/moose/python/moose/_moose.so were not linked against libgslcblas.so.0 (they use none of the library's symbols) dh_gencontrol -pmoose dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe # only call dh_scour for packages in main if grep -q '^Component:[[:space:]]*main' /CurrentlyBuilding 2>/dev/null; then dh_scour -pmoose ; fi dh_md5sums -pmoose dh_builddeb -pmoose INFO: pkgstriptranslations version 121 INFO: Disabling pkgstriptranslations for PPA build INFO: Disabling pkgmaintainermangler for PPA build INFO: Disabling pkgstripfiles for PPA build dpkg-deb: building package `moose' in `../moose_3.0-0~2918~ubuntu14.04.1_amd64.deb'. dpkg-genchanges -B -mUbuntu Build Daemon >../moose_3.0-0~2918~ubuntu14.04.1_amd64.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: warning: the current version (3.0-0~2918~ubuntu14.04.1) is earlier than the previous one (3.0) dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build moose-3.0 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20140726-1400 chroot-autobuild/build/buildd/moose_3.0-0~2918~ubuntu14.04.1_amd64.deb: new debian package, version 2.0. size 6195712 bytes: control archive= 20291 bytes. 1248 bytes, 23 lines control 55939 bytes, 635 lines md5sums 2033 bytes, 58 lines * postinst #!/bin/sh 1511 bytes, 65 lines * prerm #!/bin/sh Package: moose Version: 3.0-0~2918~ubuntu14.04.1 Architecture: amd64 Maintainer: Dilawar Singh Installed-Size: 28876 Depends: libc6 (>= 2.14), libgcc1 (>= 1:4.1.1), libgsl0ldbl (>= 1.9), libpython2.7 (>= 2.7), libstdc++6 (>= 4.6), libhdf5-7, gsl-bin Suggests: libsbml5 Section: science Priority: optional Homepage: http://moose.ncbs.res.in Description: MOOSE is the Multiscale Object-Oriented Simulation Environment. It is the base and numerical core for large, detailed simulations including Computational Neuroscience and Systems Biology. MOOSE spans the range from single molecules to subcellular networks, from single cells to neuronal networks, and to still larger systems. MOOSE uses Python for scripting compatibility with a large range of software and analysis tools. It recognizes model definition standards including SBML, NeuroML, and GENESIS model file formatsGallery . MOOSE is open source software, licensed under the LGPL (Lesser GNU Public License). It has absolutely no warranty. . The MOOSE team is also participating in development of MOOGLI: a library and standalone application for displaying time-course of activity of detailed 3-D network models using OpenGL and also using OpenSceneGraph chroot-autobuild/build/buildd/moose_3.0-0~2918~ubuntu14.04.1_amd64.deb: dpkg-deb: file `chroot-autobuild/build/buildd/moose_3.0-0~2918~ubuntu14.04.1_amd64.deb' contains ununderstood data member data.tar.xz , giving up moose_3.0-0~2918~ubuntu14.04.1_amd64.changes: Format: 1.8 Date: Sat, 26 Jul 2014 13:46:56 +0000 Source: moose Binary: moose Architecture: amd64 Version: 3.0-0~2918~ubuntu14.04.1 Distribution: trusty Urgency: low Maintainer: Ubuntu Build Daemon Changed-By: Dilawar Singh Description: moose - MOOSE is the Multiscale Object-Oriented Simulation Environment. I Changes: moose (3.0-0~2918~ubuntu14.04.1) trusty; urgency=low . * Auto build. Checksums-Sha1: bd875a4b8fb1540c12fd63c684bcd59197ea2a6b 6195712 moose_3.0-0~2918~ubuntu14.04.1_amd64.deb Checksums-Sha256: c60bdb94b477ad05f9fe4ae6e07128270ea527b0c9ebac21a77a5f08fc9b838c 6195712 moose_3.0-0~2918~ubuntu14.04.1_amd64.deb Files: ed06b6d2814d509c1261301a2061f968 6195712 science optional moose_3.0-0~2918~ubuntu14.04.1_amd64.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20140726-1400 Build needed 00:09:53, 786900k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-6214769'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-6214769/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-6214769'] Unmounting chroot for build PACKAGEBUILD-6214769... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-6214769'] Removing build PACKAGEBUILD-6214769