collatex

lp:~bramb-g/collatex/graph-based-collation.bramb-g

Created by BramBuitendijk on 2010-11-05 and last modified on 2011-02-08

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1005. By BramBuitendijk on 2011-02-08: [BB] code cleanup
1004. By BramBuitendijk on 2011-02-08: [BB] code cleanup
1003. By BramBuitendijk on 2011-02-08: [BB] better fix for joining algorithm
1002. By BramBuitendijk on 2011-02-08: [BB] fixed bug where some edges were passed multiple times
1001. By Ronald Haentjens Dekker on 2011-02-08: [RHD] Refactoring: Replaced QAD implementation of getState() method on ApparatusEntry with a real Vertices based implementation
1000. By Ronald Haentjens Dekker on 2011-02-08: [RHD] Darwin example: use new ApparatusEntry API
999. By Ronald Haentjens Dekker on 2011-02-08: [RHD] - Refactoring: Made ApparatusEntry SegmentedVariantGraphVertex based
- Refactoring: AE/PSA: Use Witness objects instead of sigla strings as parameter
- Added containsWitness(witness) method to ISegmentedVariantGraphVertex
998. By Ronald Haentjens Dekker on 2011-02-03: [RHD} Cleaned up ApparatusEntry class
997. By Ronald Haentjens Dekker on 2011-02-03: [RHD] Made VariantGraphRanker no longer use getNormalized(); Replaced by getVertex() method.
996. By Ronald Haentjens Dekker on 2011-02-01: [RHD] Adapted Darwin example to the new API.

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