Branches for Quantal

Author: Andreas Tille
Revision Date: 2012-06-07 17:40:29 UTC

* New upstream version which is now provided at BioConductor
  and thus we also do a name change in the packaging
* debian/get-orig-source: Remove "binary without source"
  manual.pdf from upstream source
* debian/control:
   - s/cran/bioc/ (package names, Vcs fields)
   - Replaces/Provides/Conflicts: r-cran-qvalue
   - Standards-Version: 3.9.3 (no changes needed)
   - Build-Depends: r-base-dev (>= 2.14.2~20120222) which is supporting
     R:Depends substitution variable
* debian/rules: Remove R:Depends substitution variable which is now
  included in /usr/share/R/debian/r-cran.mk
* debian/watch: Detect new version (thanks to Paul Wise for the tip)
* debian/README.test: advise how to test the package
* debian/copyright:
   - Fixed DEP5 issues using `cme fix dpkg-copyright`
   - s/LGPL-3+/LGPL/ as specified in DESCRIPTION
* debian/README.Debian: Document removal of manual.pdf and where
  it can be found online