topp binary package in Ubuntu Noble s390x
TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis
of HPLC/MS data. It consists of a set of numerous small applications
that can be chained together to create analysis pipelines tailored
for a specific problem. The applications make use of the libopenms
library. Some examples of these applications are :
.
- TOPPView: A viewer for mass spectrometry data.
- TOPPAS: An assistant for GUI-driven TOPP workflow design.
- DTAExtractor: Extracts spectra of an MS run file to several
files in DTA format.
- FileConverter: Converts between different MS file formats.
- FileFilter: Extracts or manipulates portions of data from peak,
feature or consensus feature files.
- SpectraMerger: Merges spectra from an LC/MS map, either by
precursor or by RT blocks.
- BaselineFilter: Removes the baseline from profile spectra using a
top-hat filter.
- InternalCalibra
- PTModel: Trains a model for the prediction of proteotypic
peptides from a training set.
- RTPredict: Predicts retention times for peptides using a model
trained by RTModel.
- ExecutePipeline: Executes workflows created by TOPPAS.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
---|---|---|---|---|---|---|---|---|---|
2024-04-13 08:09:01 UTC | Published | Ubuntu Noble s390x | release | universe | science | Optional | 2.6.0+cleaned1-4build4 | ||
|
|||||||||
Deleted | Ubuntu Noble s390x | proposed | universe | science | Optional | 2.6.0+cleaned1-4build4 | |||
|
|||||||||
2024-04-13 08:09:18 UTC | Superseded | Ubuntu Noble s390x | release | universe | science | Optional | 2.6.0+cleaned1-4build3 | ||
|
|||||||||
2024-04-14 12:10:16 UTC | Deleted | Ubuntu Noble s390x | proposed | universe | science | Optional | 2.6.0+cleaned1-4build3 | ||
|
|||||||||
2024-04-06 12:10:12 UTC | Deleted | Ubuntu Noble s390x | updates | universe | science | Optional | 2.6.0+cleaned1-4 | ||
|
|||||||||
2024-04-05 03:48:39 UTC | Superseded | Ubuntu Noble s390x | release | universe | science | Optional | 2.6.0+cleaned1-4build2 | ||
|
|||||||||
2024-04-06 12:10:12 UTC | Deleted | Ubuntu Noble s390x | proposed | universe | science | Optional | 2.6.0+cleaned1-4build2 | ||
|
|||||||||
2024-03-15 12:27:28 UTC | Superseded | Ubuntu Noble s390x | proposed | universe | science | Optional | 2.6.0+cleaned1-4build1 | ||
|
|||||||||
2024-03-29 03:56:46 UTC | Superseded | Ubuntu Noble s390x | release | universe | science | Optional | 2.6.0+cleaned1-4 | ||
|
|||||||||
2024-04-06 12:10:12 UTC | Deleted | Ubuntu Noble s390x | proposed | universe | science | Optional | 2.6.0+cleaned1-4 | ||
|
|||||||||
2023-12-24 23:02:09 UTC | Superseded | Ubuntu Noble s390x | release | universe | science | Optional | 2.6.0+cleaned1-3build5 | ||
|
|||||||||
2024-01-14 00:10:16 UTC | Deleted | Ubuntu Noble s390x | proposed | universe | science | Optional | 2.6.0+cleaned1-3build5 | ||
|
|||||||||
2023-12-20 12:56:45 UTC | Superseded | Ubuntu Noble s390x | release | universe | science | Optional | 2.6.0+cleaned1-3build4 | ||
|