https://launchpad.net/ubuntu/+source/python-bx/0.11.0-2build1/+build/28010029 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-077 5.4.0-173-generic #191-Ubuntu SMP Fri Feb 2 13:54:37 UTC 2024 aarch64 Buildd toolchain package versions: launchpad-buildd_236~650~ubuntu20.04.1 python3-lpbuildd_236~650~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.11 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1.1. Syncing the system clock with the buildd NTP service... 5 Apr 03:37:05 ntpdate[1829]: adjust time server 10.211.37.1 offset 0.001592 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-28010029 --image-type chroot /home/buildd/filecache-default/59612f0fc5bae33f6226b6e60c2e882b82c04bd0 Creating target for build PACKAGEBUILD-28010029 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-28010029 Starting target for build PACKAGEBUILD-28010029 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-28010029 'deb http://ftpmaster.internal/ubuntu noble main universe' 'deb http://ftpmaster.internal/ubuntu noble-security main universe' 'deb http://ftpmaster.internal/ubuntu noble-updates main universe' 'deb http://ftpmaster.internal/ubuntu noble-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-28010029 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-28010029 Updating target for build PACKAGEBUILD-28010029 Get:1 http://ftpmaster.internal/ubuntu noble InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu noble-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu noble-updates InRelease [89.7 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main armhf Packages [1340 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main Translation-en [512 kB] Get:7 http://ftpmaster.internal/ubuntu noble/universe armhf Packages [14.4 MB] Get:8 http://ftpmaster.internal/ubuntu noble/universe Translation-en [6083 kB] Get:9 http://ftpmaster.internal/ubuntu noble-updates/main armhf Packages [666 kB] Get:10 http://ftpmaster.internal/ubuntu noble-updates/main Translation-en [242 kB] Get:11 http://ftpmaster.internal/ubuntu noble-updates/universe armhf Packages [4423 kB] Get:12 http://ftpmaster.internal/ubuntu noble-updates/universe Translation-en [1693 kB] Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main armhf Packages [211 kB] Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main Translation-en [71.2 kB] Get:15 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf Packages [1126 kB] Get:16 http://ftpmaster.internal/ubuntu noble-proposed/universe Translation-en [495 kB] Fetched 31.8 MB in 21s (1541 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libnsl-dev libtirpc-dev libunistring2 perl-modules-5.36 Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libapt-pkg6.0* libdb5.3* libext2fs2* libgdbm-compat4* libgdbm6* libgnutls30* libhogweed6* libnettle8* libnpth0* libperl5.36* libpng16-16* libreadline8* libssl3* libtirpc3* usrmerge* The following NEW packages will be installed: cpp-13-arm-linux-gnueabihf cpp-arm-linux-gnueabihf g++-13-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-13-arm-linux-gnueabihf gcc-14-base gcc-arm-linux-gnueabihf libapt-pkg6.0t64 libdb5.3t64 libext2fs2t64 libgdbm-compat4t64 libgdbm6t64 libgnutls30t64 libhogweed6t64 libnettle8t64 libnpth0t64 libperl5.38t64 libpng16-16t64 libreadline8t64 libssl3t64 libtirpc3t64 libunistring5 perl-modules-5.38 The following packages will be upgraded: apt apt-utils base-files base-passwd bash bash-completion binutils binutils-arm-linux-gnueabihf binutils-common bsdextrautils bsdutils bzip2 ca-certificates coreutils cpp cpp-13 dash debconf debconf-i18n debianutils diffutils dpkg dpkg-dev e2fsprogs fakeroot g++ g++-13 gcc gcc-13 gcc-13-base gpg gpg-agent gpgconf gpgv grep gzip hostname init init-system-helpers krb5-locales libacl1 libapparmor1 libargon2-1 libasan8 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libfakeroot libfdisk1 libffi8 libgcc-13-dev libgcc-s1 libgcrypt20 libgomp1 libgpg-error-l10n libgpg-error0 libgpm2 libgssapi-krb5-2 libidn2-0 libip4tc2 libjansson4 libk5crypto3 libkeyutils1 libkmod2 libkrb5-3 libkrb5support0 liblocale-gettext-perl liblzma5 libmd0 libmount1 libncursesw6 libnsl-dev libnsl2 libnss-nisplus libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libproc2-0 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsframe1 libsmartcols1 libsqlite3-0 libss2 libstdc++-13-dev libstdc++6 libsystemd-shared libsystemd0 libtext-charwidth-perl libtext-iconv-perl libtinfo6 libtirpc-common libtirpc-dev libubsan1 libudev1 libuuid1 libxxhash0 libzstd1 linux-libc-dev login logsave lto-disabled-list mawk mount ncurses-base ncurses-bin openssl optipng passwd perl perl-base pinentry-curses procps psmisc readline-common sed sensible-utils systemd systemd-dev systemd-sysv sysvinit-utils tar tzdata ubuntu-keyring util-linux uuid-runtime xz-utils zlib1g 154 upgraded, 23 newly installed, 15 to remove and 0 not upgraded. Need to get 96.8 MB of archives. After this operation, 24.8 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu noble/main armhf libnsl-dev armhf 1.3.0-3build3 [66.2 kB] Get:2 http://ftpmaster.internal/ubuntu noble/main armhf libcrypt-dev armhf 1:4.4.36-4 [136 kB] Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libc6-dev armhf 2.39-0ubuntu8 [1352 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libc-dev-bin armhf 2.39-0ubuntu8 [19.1 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc-common all 1.3.4+ds-1.1build1 [8094 B] Get:6 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc-dev armhf 1.3.4+ds-1.1build1 [184 kB] Get:7 http://ftpmaster.internal/ubuntu noble/universe armhf libnss-nisplus armhf 1.3-5build1 [20.1 kB] Get:8 http://ftpmaster.internal/ubuntu noble/main armhf libnsl2 armhf 1.3.0-3build3 [36.5 kB] Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgssapi-krb5-2 armhf 1.20.1-6ubuntu2 [119 kB] Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libkrb5-3 armhf 1.20.1-6ubuntu2 [321 kB] Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libk5crypto3 armhf 1.20.1-6ubuntu2 [78.6 kB] Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libkrb5support0 armhf 1.20.1-6ubuntu2 [31.4 kB] Get:13 http://ftpmaster.internal/ubuntu noble/main armhf libacl1 armhf 2.3.2-1 [15.1 kB] Get:14 http://ftpmaster.internal/ubuntu noble/main armhf libapparmor1 armhf 4.0.0-beta3-0ubuntu3 [45.1 kB] Get:15 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libaudit-common all 1:3.1.2-2.1build1 [5736 B] Get:16 http://ftpmaster.internal/ubuntu noble/main armhf libcap-ng0 armhf 0.8.4-2build2 [13.6 kB] Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libaudit1 armhf 1:3.1.2-2.1build1 [44.4 kB] Get:18 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libblkid1 armhf 2.39.3-9ubuntu4 [160 kB] Get:19 http://ftpmaster.internal/ubuntu noble/main armhf libcap2 armhf 1:2.66-5ubuntu1 [25.8 kB] Get:20 http://ftpmaster.internal/ubuntu noble/main armhf libcrypt1 armhf 1:4.4.36-4 [104 kB] Get:21 http://ftpmaster.internal/ubuntu noble/main armhf libgpg-error-l10n all 1.47-3build1 [8024 B] Get:22 http://ftpmaster.internal/ubuntu noble/main armhf libgpg-error0 armhf 1.47-3build1 [61.6 kB] Get:23 http://ftpmaster.internal/ubuntu noble/main armhf libgcrypt20 armhf 1.10.3-2 [454 kB] Get:24 http://ftpmaster.internal/ubuntu noble/main armhf liblzma5 armhf 5.6.1+really5.4.5-1 [111 kB] Get:25 http://ftpmaster.internal/ubuntu noble/main armhf libzstd1 armhf 1.5.5+dfsg2-2 [265 kB] Get:26 http://ftpmaster.internal/ubuntu noble/main armhf libkmod2 armhf 31+20240202-2ubuntu5 [45.0 kB] Get:27 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-8-0 armhf 10.42-4ubuntu1 [198 kB] Get:28 http://ftpmaster.internal/ubuntu noble/main armhf libselinux1 armhf 3.5-2ubuntu2 [70.9 kB] Get:29 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libmount1 armhf 2.39.3-9ubuntu4 [171 kB] Get:30 http://ftpmaster.internal/ubuntu noble/main armhf libtext-iconv-perl armhf 1.7-8build3 [12.7 kB] Get:31 http://ftpmaster.internal/ubuntu noble/main armhf libtext-charwidth-perl armhf 0.04-11build3 [8992 B] Get:32 http://ftpmaster.internal/ubuntu noble/main armhf perl-modules-5.38 all 5.38.2-3.2build1 [3110 kB] Get:33 http://ftpmaster.internal/ubuntu noble/main armhf libdb5.3t64 armhf 5.3.28+dfsg2-6build1 [661 kB] Get:34 http://ftpmaster.internal/ubuntu noble/main armhf libgdbm6t64 armhf 1.23-5.1build1 [30.3 kB] Get:35 http://ftpmaster.internal/ubuntu noble/main armhf libgdbm-compat4t64 armhf 1.23-5.1build1 [6216 B] Get:36 http://ftpmaster.internal/ubuntu noble/main armhf libperl5.38t64 armhf 5.38.2-3.2build1 [4109 kB] Get:37 http://ftpmaster.internal/ubuntu noble/main armhf perl armhf 5.38.2-3.2build1 [231 kB] Get:38 http://ftpmaster.internal/ubuntu noble/main armhf perl-base armhf 5.38.2-3.2build1 [1671 kB] Get:39 http://ftpmaster.internal/ubuntu noble/main armhf liblocale-gettext-perl armhf 1.07-6ubuntu5 [15.1 kB] Get:40 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libc6 armhf 2.39-0ubuntu8 [2828 kB] Get:41 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libc-bin armhf 2.39-0ubuntu8 [530 kB] Get:42 http://ftpmaster.internal/ubuntu noble/main armhf openssl armhf 3.0.13-0ubuntu3 [974 kB] Get:43 http://ftpmaster.internal/ubuntu noble/main armhf libsystemd-shared armhf 255.4-1ubuntu6 [2010 kB] Get:44 http://ftpmaster.internal/ubuntu noble/main armhf libcryptsetup12 armhf 2:2.7.0-1ubuntu3 [238 kB] Get:45 http://ftpmaster.internal/ubuntu noble/main armhf libssl3t64 armhf 3.0.13-0ubuntu3 [1558 kB] Get:46 http://ftpmaster.internal/ubuntu noble/main armhf systemd-dev all 255.4-1ubuntu6 [104 kB] Get:47 http://ftpmaster.internal/ubuntu noble/main armhf systemd-sysv armhf 255.4-1ubuntu6 [11.9 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main armhf systemd armhf 255.4-1ubuntu6 [3502 kB] Get:49 http://ftpmaster.internal/ubuntu noble/main armhf libsystemd0 armhf 255.4-1ubuntu6 [406 kB] Get:50 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules-bin armhf 1.5.3-5ubuntu4 [47.1 kB] Get:51 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules armhf 1.5.3-5ubuntu4 [260 kB] Get:52 http://ftpmaster.internal/ubuntu noble/main armhf libapt-pkg6.0t64 armhf 2.7.14build2 [986 kB] Get:53 http://ftpmaster.internal/ubuntu noble/main armhf libnettle8t64 armhf 3.9.1-2.2build1 [187 kB] Get:54 http://ftpmaster.internal/ubuntu noble/main armhf libhogweed6t64 armhf 3.9.1-2.2build1 [187 kB] Get:55 http://ftpmaster.internal/ubuntu noble/main armhf libp11-kit0 armhf 0.25.3-4ubuntu1 [258 kB] Get:56 http://ftpmaster.internal/ubuntu noble/main armhf libunistring5 armhf 1.1-2 [512 kB] Get:57 http://ftpmaster.internal/ubuntu noble/main armhf libgnutls30t64 armhf 3.8.3-1.1ubuntu3 [947 kB] Get:58 http://ftpmaster.internal/ubuntu noble/main armhf apt armhf 2.7.14build2 [1368 kB] Get:59 http://ftpmaster.internal/ubuntu noble/main armhf apt-utils armhf 2.7.14build2 [210 kB] Get:60 http://ftpmaster.internal/ubuntu noble-proposed/main armhf bzip2 armhf 1.0.8-5.1 [33.5 kB] Get:61 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libbz2-1.0 armhf 1.0.8-5.1 [31.1 kB] Get:62 http://ftpmaster.internal/ubuntu noble/main armhf zlib1g armhf 1:1.3.dfsg-3.1ubuntu2 [49.2 kB] Get:63 http://ftpmaster.internal/ubuntu noble/main armhf debconf-i18n all 1.5.86 [205 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main armhf debconf all 1.5.86 [124 kB] Get:65 http://ftpmaster.internal/ubuntu noble/main armhf libpam0g armhf 1.5.3-5ubuntu4 [62.0 kB] Get:66 http://ftpmaster.internal/ubuntu noble/main armhf libseccomp2 armhf 2.5.5-1ubuntu3 [49.5 kB] Get:67 http://ftpmaster.internal/ubuntu noble/main armhf libargon2-1 armhf 0~20190702+dfsg-4 [22.3 kB] Get:68 http://ftpmaster.internal/ubuntu noble/main armhf libudev1 armhf 255.4-1ubuntu6 [166 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main armhf libdevmapper1.02.1 armhf 2:1.02.185-3ubuntu3 [135 kB] Get:70 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libuuid1 armhf 2.39.3-9ubuntu4 [34.6 kB] Get:71 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libfdisk1 armhf 2.39.3-9ubuntu4 [196 kB] Get:72 http://ftpmaster.internal/ubuntu noble-proposed/main armhf mount armhf 2.39.3-9ubuntu4 [134 kB] Get:73 http://ftpmaster.internal/ubuntu noble/main armhf libcom-err2 armhf 1.47.0-2.4~exp1ubuntu3 [21.9 kB] Get:74 http://ftpmaster.internal/ubuntu noble/main armhf libkeyutils1 armhf 1.6.3-3 [8120 B] Get:75 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc3t64 armhf 1.3.4+ds-1.1build1 [73.3 kB] Get:76 http://ftpmaster.internal/ubuntu noble/main armhf linux-libc-dev armhf 6.8.0-20.20 [1555 kB] Get:77 http://ftpmaster.internal/ubuntu noble/main armhf gcc-14-base armhf 14-20240330-1ubuntu2 [47.4 kB] Get:78 http://ftpmaster.internal/ubuntu noble/main armhf libgcc-s1 armhf 14-20240330-1ubuntu2 [41.5 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main armhf base-files armhf 13ubuntu9 [73.4 kB] Get:80 http://ftpmaster.internal/ubuntu noble/main armhf debianutils armhf 5.17build1 [89.0 kB] Get:81 http://ftpmaster.internal/ubuntu noble-proposed/main armhf bash armhf 5.2.21-2ubuntu4 [668 kB] Get:82 http://ftpmaster.internal/ubuntu noble-proposed/main armhf bsdutils armhf 1:2.39.3-9ubuntu4 [101 kB] Get:83 http://ftpmaster.internal/ubuntu noble/main armhf coreutils armhf 9.4-3ubuntu5 [1280 kB] Get:84 http://ftpmaster.internal/ubuntu noble/main armhf libstdc++6 armhf 14-20240330-1ubuntu2 [714 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main armhf libxxhash0 armhf 0.8.2-2 [31.3 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main armhf libffi8 armhf 3.4.6-1 [21.0 kB] Get:87 http://ftpmaster.internal/ubuntu noble/main armhf libidn2-0 armhf 2.3.7-2 [96.1 kB] Get:88 http://ftpmaster.internal/ubuntu noble/main armhf libdebconfclient0 armhf 0.271ubuntu3 [10.9 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main armhf base-passwd armhf 3.6.3 [51.0 kB] Get:90 http://ftpmaster.internal/ubuntu noble/main armhf libsqlite3-0 armhf 3.45.1-1ubuntu2 [590 kB] Get:91 http://ftpmaster.internal/ubuntu noble/main armhf gpg armhf 2.4.4-2ubuntu16 [524 kB] Get:92 http://ftpmaster.internal/ubuntu noble/main armhf gpg-agent armhf 2.4.4-2ubuntu16 [235 kB] Get:93 http://ftpmaster.internal/ubuntu noble/main armhf gpgconf armhf 2.4.4-2ubuntu16 [115 kB] Get:94 http://ftpmaster.internal/ubuntu noble/main armhf readline-common all 8.2-4build1 [56.5 kB] Get:95 http://ftpmaster.internal/ubuntu noble/main armhf libncursesw6 armhf 6.4+20240113-1ubuntu1 [118 kB] Get:96 http://ftpmaster.internal/ubuntu noble/main armhf libtinfo6 armhf 6.4+20240113-1ubuntu1 [90.5 kB] Get:97 http://ftpmaster.internal/ubuntu noble/main armhf libreadline8t64 armhf 8.2-4build1 [129 kB] Get:98 http://ftpmaster.internal/ubuntu noble/main armhf pinentry-curses armhf 1.2.1-3ubuntu5 [36.7 kB] Get:99 http://ftpmaster.internal/ubuntu noble/main armhf init-system-helpers all 1.66ubuntu1 [39.4 kB] Get:100 http://ftpmaster.internal/ubuntu noble/main armhf libnpth0t64 armhf 1.6-3.1build1 [6998 B] Get:101 http://ftpmaster.internal/ubuntu noble/main armhf gpgv armhf 2.4.4-2ubuntu16 [224 kB] Get:102 http://ftpmaster.internal/ubuntu noble/main armhf ubuntu-keyring all 2023.11.28.1 [11.1 kB] Get:103 http://ftpmaster.internal/ubuntu noble/main armhf tar armhf 1.35+dfsg-3 [236 kB] Get:104 http://ftpmaster.internal/ubuntu noble/main armhf dpkg armhf 1.22.6ubuntu6 [1230 kB] Get:105 http://ftpmaster.internal/ubuntu noble/main armhf dash armhf 0.5.12-6ubuntu5 [80.8 kB] Get:106 http://ftpmaster.internal/ubuntu noble/main armhf diffutils armhf 1:3.10-1 [167 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main armhf grep armhf 3.11-4 [166 kB] Get:108 http://ftpmaster.internal/ubuntu noble/main armhf gzip armhf 1.12-1ubuntu2 [95.8 kB] Get:109 http://ftpmaster.internal/ubuntu noble/main armhf hostname armhf 3.23+nmu2ubuntu1 [10.3 kB] Get:110 http://ftpmaster.internal/ubuntu noble/main armhf login armhf 1:4.13+dfsg1-4ubuntu1 [200 kB] Get:111 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-bin armhf 6.4+20240113-1ubuntu1 [178 kB] Get:112 http://ftpmaster.internal/ubuntu noble/main armhf sed armhf 4.9-2 [198 kB] Get:113 http://ftpmaster.internal/ubuntu noble-proposed/main armhf util-linux armhf 2.39.3-9ubuntu4 [1216 kB] Get:114 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-base all 6.4+20240113-1ubuntu1 [25.4 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main armhf sysvinit-utils armhf 3.08-6ubuntu2 [33.7 kB] Get:116 http://ftpmaster.internal/ubuntu noble/main armhf logsave armhf 1.47.0-2.4~exp1ubuntu3 [21.9 kB] Get:117 http://ftpmaster.internal/ubuntu noble/main armhf libext2fs2t64 armhf 1.47.0-2.4~exp1ubuntu3 [201 kB] Get:118 http://ftpmaster.internal/ubuntu noble/main armhf e2fsprogs armhf 1.47.0-2.4~exp1ubuntu3 [571 kB] Get:119 http://ftpmaster.internal/ubuntu noble/main armhf optipng armhf 0.7.8+ds-1build2 [109 kB] Get:120 http://ftpmaster.internal/ubuntu noble/main armhf libpng16-16t64 armhf 1.6.43-5build1 [166 kB] Get:121 http://ftpmaster.internal/ubuntu noble/main armhf init armhf 1.66ubuntu1 [6186 B] Get:122 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsmartcols1 armhf 2.39.3-9ubuntu4 [117 kB] Get:123 http://ftpmaster.internal/ubuntu noble-proposed/main armhf uuid-runtime armhf 2.39.3-9ubuntu4 [41.7 kB] Get:124 http://ftpmaster.internal/ubuntu noble/main armhf libattr1 armhf 1:2.5.2-1 [10.3 kB] Get:125 http://ftpmaster.internal/ubuntu noble/main armhf libmd0 armhf 1.1.0-2 [23.1 kB] Get:126 http://ftpmaster.internal/ubuntu noble/main armhf libpam-runtime all 1.5.3-5ubuntu4 [40.8 kB] Get:127 http://ftpmaster.internal/ubuntu noble/main armhf libsemanage-common all 3.5-1build5 [10.1 kB] Get:128 http://ftpmaster.internal/ubuntu noble/main armhf libsepol2 armhf 3.5-2 [262 kB] Get:129 http://ftpmaster.internal/ubuntu noble/main armhf libsemanage2 armhf 3.5-1build5 [84.5 kB] Get:130 http://ftpmaster.internal/ubuntu noble/main armhf passwd armhf 1:4.13+dfsg1-4ubuntu1 [817 kB] Get:131 http://ftpmaster.internal/ubuntu noble/main armhf libproc2-0 armhf 2:4.0.4-4ubuntu3 [49.0 kB] Get:132 http://ftpmaster.internal/ubuntu noble/main armhf libss2 armhf 1.47.0-2.4~exp1ubuntu3 [14.7 kB] Get:133 http://ftpmaster.internal/ubuntu noble/main armhf mawk armhf 1.3.4.20240123-1 [115 kB] Get:134 http://ftpmaster.internal/ubuntu noble/main armhf procps armhf 2:4.0.4-4ubuntu3 [700 kB] Get:135 http://ftpmaster.internal/ubuntu noble/main armhf sensible-utils all 0.0.22 [22.5 kB] Get:136 http://ftpmaster.internal/ubuntu noble/main armhf ca-certificates all 20240203 [159 kB] Get:137 http://ftpmaster.internal/ubuntu noble-proposed/main armhf krb5-locales all 1.20.1-6ubuntu2 [13.8 kB] Get:138 http://ftpmaster.internal/ubuntu noble/main armhf tzdata all 2024a-1ubuntu1 [273 kB] Get:139 http://ftpmaster.internal/ubuntu noble/main armhf bash-completion all 1:2.11-8 [180 kB] Get:140 http://ftpmaster.internal/ubuntu noble-proposed/main armhf bsdextrautils armhf 2.39.3-9ubuntu4 [78.7 kB] Get:141 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgpm2 armhf 1.20.7-11 [13.6 kB] Get:142 http://ftpmaster.internal/ubuntu noble/main armhf libip4tc2 armhf 1.8.10-3ubuntu1 [21.2 kB] Get:143 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libjansson4 armhf 2.14-2build2 [28.2 kB] Get:144 http://ftpmaster.internal/ubuntu noble/main armhf psmisc armhf 23.7-1build1 [176 kB] Get:145 http://ftpmaster.internal/ubuntu noble/main armhf xz-utils armhf 5.6.1+really5.4.5-1 [267 kB] Get:146 http://ftpmaster.internal/ubuntu noble/main armhf libctf0 armhf 2.42-4ubuntu2 [87.7 kB] Get:147 http://ftpmaster.internal/ubuntu noble/main armhf libctf-nobfd0 armhf 2.42-4ubuntu2 [88.0 kB] Get:148 http://ftpmaster.internal/ubuntu noble/main armhf binutils-arm-linux-gnueabihf armhf 2.42-4ubuntu2 [2925 kB] Get:149 http://ftpmaster.internal/ubuntu noble/main armhf libbinutils armhf 2.42-4ubuntu2 [460 kB] Get:150 http://ftpmaster.internal/ubuntu noble/main armhf binutils armhf 2.42-4ubuntu2 [3072 B] Get:151 http://ftpmaster.internal/ubuntu noble/main armhf binutils-common armhf 2.42-4ubuntu2 [217 kB] Get:152 http://ftpmaster.internal/ubuntu noble/main armhf libsframe1 armhf 2.42-4ubuntu2 [13.1 kB] Get:153 http://ftpmaster.internal/ubuntu noble/main armhf libubsan1 armhf 14-20240330-1ubuntu2 [1153 kB] Get:154 http://ftpmaster.internal/ubuntu noble/main armhf libgomp1 armhf 14-20240330-1ubuntu2 [125 kB] Get:155 http://ftpmaster.internal/ubuntu noble/main armhf libatomic1 armhf 14-20240330-1ubuntu2 [7846 B] Get:156 http://ftpmaster.internal/ubuntu noble/main armhf libasan8 armhf 14-20240330-1ubuntu2 [2940 kB] Get:157 http://ftpmaster.internal/ubuntu noble-proposed/main armhf g++-13 armhf 13.2.0-23ubuntu3 [14.5 kB] Get:158 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gcc-13 armhf 13.2.0-23ubuntu3 [450 kB] Get:159 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libstdc++-13-dev armhf 13.2.0-23ubuntu3 [2455 kB] Get:160 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgcc-13-dev armhf 13.2.0-23ubuntu3 [899 kB] Get:161 http://ftpmaster.internal/ubuntu noble/main armhf libcc1-0 armhf 14-20240330-1ubuntu2 [39.1 kB] Get:162 http://ftpmaster.internal/ubuntu noble-proposed/main armhf cpp-13 armhf 13.2.0-23ubuntu3 [1034 B] Get:163 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gcc-13-base armhf 13.2.0-23ubuntu3 [48.6 kB] Get:164 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gcc-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu3 [16.8 MB] Get:165 http://ftpmaster.internal/ubuntu noble-proposed/main armhf g++-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu3 [9939 kB] Get:166 http://ftpmaster.internal/ubuntu noble-proposed/main armhf cpp-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu3 [8759 kB] Get:167 http://ftpmaster.internal/ubuntu noble/main armhf g++ armhf 4:13.2.0-7ubuntu1 [1090 B] Get:168 http://ftpmaster.internal/ubuntu noble/main armhf gcc armhf 4:13.2.0-7ubuntu1 [5022 B] Get:169 http://ftpmaster.internal/ubuntu noble/main armhf cpp armhf 4:13.2.0-7ubuntu1 [22.4 kB] Get:170 http://ftpmaster.internal/ubuntu noble/main armhf cpp-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu1 [5320 B] Get:171 http://ftpmaster.internal/ubuntu noble/main armhf gcc-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu1 [1220 B] Get:172 http://ftpmaster.internal/ubuntu noble/main armhf g++-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu1 [966 B] Get:173 http://ftpmaster.internal/ubuntu noble/main armhf dpkg-dev all 1.22.6ubuntu6 [1074 kB] Get:174 http://ftpmaster.internal/ubuntu noble/main armhf libdpkg-perl all 1.22.6ubuntu6 [268 kB] Get:175 http://ftpmaster.internal/ubuntu noble/main armhf lto-disabled-list all 47 [12.4 kB] Get:176 http://ftpmaster.internal/ubuntu noble/main armhf libfakeroot armhf 1.33-1 [28.7 kB] Get:177 http://ftpmaster.internal/ubuntu noble/main armhf fakeroot armhf 1.33-1 [68.6 kB] Preconfiguring packages ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3 to /lib/arm-linux-gnueabihf/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0 to /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:armhf (1.3.4+ds-1.1build1) ... Preparing to unpack .../5-linux-libc-dev_6.8.0-20.20_armhf.deb ... Unpacking linux-libc-dev:armhf (6.8.0-20.20) over (6.5.0-9.9) ... Selecting previously unselected package gcc-14-base:armhf. Preparing to unpack .../6-gcc-14-base_14-20240330-1ubuntu2_armhf.deb ... Unpacking gcc-14-base:armhf (14-20240330-1ubuntu2) ... Setting up gcc-14-base:armhf (14-20240330-1ubuntu2) ... (Reading database ... 14977 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14-20240330-1ubuntu2_armhf.deb ... Unpacking libgcc-s1:armhf (14-20240330-1ubuntu2) over (13.2.0-4ubuntu3) ... Setting up libgcc-s1:armhf (14-20240330-1ubuntu2) ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-4build1) ... Preparing to unpack .../pinentry-curses_1.2.1-3ubuntu5_armhf.deb ... Unpacking pinentry-curses (1.2.1-3ubuntu5) over (1.2.1-1ubuntu1) ... Preparing to unpack .../init-system-helpers_1.66ubuntu1_all.deb ... Unpacking init-system-helpers (1.66ubuntu1) over (1.65.2ubuntu1) ... Setting up init-system-helpers (1.66ubuntu1) ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libe2p.so.2 to /lib/arm-linux-gnueabihf/libe2p.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libe2p.so.2.3 to /lib/arm-linux-gnueabihf/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libext2fs.so.2 to /lib/arm-linux-gnueabihf/libext2fs.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libext2fs.so.2.4 to /lib/arm-linux-gnueabihf/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:armhf (1.47.0-2.4~exp1ubuntu3) ... Setting up libcom-err2:armhf (1.47.0-2.4~exp1ubuntu3) ... Setting up libext2fs2t64:armhf (1.47.0-2.4~exp1ubuntu3) ... (Reading database ... 14978 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.47.0-2.4~exp1ubuntu3_armhf.deb ... 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Setting up gcc (4:13.2.0-7ubuntu1) ... Setting up g++ (4:13.2.0-7ubuntu1) ... Setting up libnsl-dev:armhf (1.3.0-3build3) ... Processing triggers for libc-bin (2.39-0ubuntu8) ... Processing triggers for debianutils (5.17build1) ... (Reading database ... 15022 files and directories currently installed.) Purging configuration files for libssl3:armhf (3.0.10-1ubuntu2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-28010029 armhf noble-proposed -c chroot:build-PACKAGEBUILD-28010029 --arch=armhf --dist=noble-proposed --nolog python-bx_0.11.0-2build1.dsc Initiating build PACKAGEBUILD-28010029 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-173-generic #191-Ubuntu SMP Fri Feb 2 13:54:37 UTC 2024 armv7l sbuild (Debian sbuild) 0.79.0 (05 February 2020) on bos02-arm64-077.buildd +==============================================================================+ | python-bx 0.11.0-2build1 (armhf) Fri, 05 Apr 2024 03:38:48 +0000 | +==============================================================================+ Package: python-bx Version: 0.11.0-2build1 Source Version: 0.11.0-2build1 Distribution: noble-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-28010029/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/python-bx-qiVozI/resolver-q5L6CB' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- python-bx_0.11.0-2build1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/python-bx-qiVozI/python-bx-0.11.0' with '<>' I: NOTICE: Log filtering will replace 'build/python-bx-qiVozI' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-sequence-python3, zlib1g-dev, python3-setuptools, pybuild-plugin-pyproject, python3-all-dev:any, python3-lzo, python3-pytest, python3-pytest-cython, python3-numpy, cython3, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-python3, zlib1g-dev, python3-setuptools, pybuild-plugin-pyproject, python3-all-dev:any, python3-lzo, python3-pytest, python3-pytest-cython, python3-numpy, cython3, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [460 B] Get:5 copy:/<>/apt_archive ./ Packages [535 B] Fetched 1952 B in 0s (56.2 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: apt-utils bash-completion ca-certificates debconf-i18n krb5-locales libgpg-error-l10n libgpm2 libgssapi-krb5-2 libip4tc2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblocale-gettext-perl libnsl-dev libnsl2 libnss-nis libnss-nisplus libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libtirpc-common libtirpc-dev libtirpc3t64 libunistring2 openssl perl-modules-5.36 psmisc uuid-runtime Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev cython3 debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libdebhelper-perl libdw1t64 libelf1t64 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libgfortran5 libicu74 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblzo2-2 libmagic-mgc libmagic1t64 libpipeline1 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db media-types netbase po-debconf pybuild-plugin-pyproject python3 python3-all python3-all-dev python3-build python3-dev python3-iniconfig python3-installer python3-lzo python3-minimal python3-numpy python3-packaging python3-pkg-resources python3-pluggy python3-pyproject-hooks python3-pytest python3-pytest-cython python3-setuptools python3-toml python3-wheel python3.12 python3.12-dev python3.12-minimal zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc cython-doc dh-make flit gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3-pip python-build-doc python-installer-doc gfortran python-setuptools-doc python3.12-venv python3.12-doc binfmt-support Recommended packages: curl | wget | lynx libarchive-cpio-perl javascript-common libltdl-dev libmail-sendmail-perl python3-pygments The following NEW packages will be installed: autoconf automake autopoint autotools-dev cython3 debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libdebhelper-perl libdw1t64 libelf1t64 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libgfortran5 libicu74 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblzo2-2 libmagic-mgc libmagic1t64 libpipeline1 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db media-types netbase po-debconf pybuild-plugin-pyproject python3 python3-all python3-all-dev python3-build python3-dev python3-iniconfig python3-installer python3-lzo python3-minimal python3-numpy python3-packaging python3-pkg-resources python3-pluggy python3-pyproject-hooks python3-pytest python3-pytest-cython python3-setuptools python3-toml python3-wheel python3.12 python3.12-dev python3.12-minimal sbuild-build-depends-main-dummy zlib1g-dev 0 upgraded, 75 newly installed, 0 to remove and 0 not upgraded. Need to get 43.4 MB of archives. After this operation, 151 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [748 B] Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libpython3.12-minimal armhf 3.12.2-5ubuntu3 [817 kB] Get:3 http://ftpmaster.internal/ubuntu noble/main armhf libexpat1 armhf 2.6.1-2build1 [65.9 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main armhf python3.12-minimal armhf 3.12.2-5ubuntu3 [2004 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main armhf python3-minimal armhf 3.12.2-0ubuntu2 [27.1 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main armhf media-types all 10.1.0 [27.5 kB] Get:7 http://ftpmaster.internal/ubuntu noble/main armhf netbase all 6.4 [13.1 kB] Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libpython3.12-stdlib armhf 3.12.2-5ubuntu3 [1925 kB] Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main armhf python3.12 armhf 3.12.2-5ubuntu3 [644 kB] Get:10 http://ftpmaster.internal/ubuntu noble/main armhf libpython3-stdlib armhf 3.12.2-0ubuntu2 [9854 B] Get:11 http://ftpmaster.internal/ubuntu noble/main armhf python3 armhf 3.12.2-0ubuntu2 [24.1 kB] Get:12 http://ftpmaster.internal/ubuntu noble/main armhf libelf1t64 armhf 0.190-1.1build3 [49.9 kB] Get:13 http://ftpmaster.internal/ubuntu noble/main armhf libicu74 armhf 74.2-1ubuntu1 [10.5 MB] Get:14 http://ftpmaster.internal/ubuntu noble/main armhf libxml2 armhf 2.9.14+dfsg-1.3ubuntu3 [595 kB] Get:15 http://ftpmaster.internal/ubuntu noble/main armhf python3-pkg-resources all 68.1.2-2ubuntu1 [168 kB] Get:16 http://ftpmaster.internal/ubuntu noble/main armhf libmagic-mgc armhf 1:5.45-3build1 [307 kB] Get:17 http://ftpmaster.internal/ubuntu noble/main armhf libmagic1t64 armhf 1:5.45-3build1 [81.4 kB] Get:18 http://ftpmaster.internal/ubuntu noble/main armhf file armhf 1:5.45-3build1 [21.1 kB] Get:19 http://ftpmaster.internal/ubuntu noble/main armhf gettext-base armhf 0.21-14ubuntu1 [38.0 kB] Get:20 http://ftpmaster.internal/ubuntu noble/main armhf libuchardet0 armhf 0.0.8-1 [73.9 kB] Get:21 http://ftpmaster.internal/ubuntu noble/main armhf groff-base armhf 1.23.0-3build2 [946 kB] Get:22 http://ftpmaster.internal/ubuntu noble/main armhf libpipeline1 armhf 1.5.7-2 [26.2 kB] Get:23 http://ftpmaster.internal/ubuntu noble-proposed/main armhf man-db armhf 2.12.0-4build1 [1202 kB] Get:24 http://ftpmaster.internal/ubuntu noble/main armhf m4 armhf 1.4.19-4 [235 kB] Get:25 http://ftpmaster.internal/ubuntu noble/main armhf autoconf all 2.71-3 [339 kB] Get:26 http://ftpmaster.internal/ubuntu noble/main armhf autotools-dev all 20220109.1 [44.9 kB] Get:27 http://ftpmaster.internal/ubuntu noble/main armhf automake all 1:1.16.5-1.3ubuntu1 [558 kB] Get:28 http://ftpmaster.internal/ubuntu noble/main armhf autopoint all 0.21-14ubuntu1 [422 kB] Get:29 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf cython3 armhf 3.0.8-1ubuntu3 [3861 kB] Get:30 http://ftpmaster.internal/ubuntu noble/main armhf libdebhelper-perl all 13.14.1ubuntu5 [89.8 kB] Get:31 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noble/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:42 http://ftpmaster.internal/ubuntu noble/main armhf po-debconf all 1.0.21+nmu1 [233 kB] Get:43 http://ftpmaster.internal/ubuntu noble/main armhf debhelper all 13.14.1ubuntu5 [869 kB] Get:44 http://ftpmaster.internal/ubuntu noble/main armhf python3-setuptools all 68.1.2-2ubuntu1 [396 kB] Get:45 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf dh-python all 6.20240401 [110 kB] Get:46 http://ftpmaster.internal/ubuntu noble/main armhf libblas3 armhf 3.12.0-3 [123 kB] Get:47 http://ftpmaster.internal/ubuntu noble/main armhf libexpat1-dev armhf 2.6.1-2build1 [122 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main armhf libgfortran5 armhf 14-20240330-1ubuntu2 [312 kB] Get:49 http://ftpmaster.internal/ubuntu noble/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] Get:50 http://ftpmaster.internal/ubuntu noble/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] Get:51 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python3-pyproject-hooks all 1.0.0-2 [9434 B] Get:61 http://ftpmaster.internal/ubuntu noble/universe armhf python3-toml all 0.10.2-1 [16.5 kB] Get:62 http://ftpmaster.internal/ubuntu noble/universe armhf python3-wheel all 0.42.0-2 [53.1 kB] Get:63 http://ftpmaster.internal/ubuntu noble/universe armhf python3-build all 1.0.3-2 [27.3 kB] Get:64 http://ftpmaster.internal/ubuntu noble/universe armhf python3-installer all 0.7.0+dfsg1-2 [18.1 kB] Get:65 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf pybuild-plugin-pyproject all 6.20240401 [1726 B] Get:66 http://ftpmaster.internal/ubuntu noble/main armhf python3-all armhf 3.12.2-0ubuntu2 [888 B] Get:67 http://ftpmaster.internal/ubuntu noble-proposed/main armhf python3.12-dev armhf 3.12.2-5ubuntu3 [498 kB] Get:68 http://ftpmaster.internal/ubuntu noble/main armhf python3-dev armhf 3.12.2-0ubuntu2 [26.7 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main armhf python3-all-dev armhf 3.12.2-0ubuntu2 [904 B] Get:70 http://ftpmaster.internal/ubuntu noble/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] Get:71 http://ftpmaster.internal/ubuntu noble/universe armhf python3-lzo armhf 1.14-1build3 [8286 B] Get:72 http://ftpmaster.internal/ubuntu noble-proposed/main armhf python3-numpy armhf 1:1.26.4+ds-6ubuntu1 [3541 kB] Get:73 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pluggy all 1.4.0-1 [20.4 kB] Get:74 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf python3-pytest all 8.0.2-1 [248 kB] Get:75 http://ftpmaster.internal/ubuntu noble/universe armhf python3-pytest-cython all 0.1.1-1 [7502 B] Preconfiguring packages ... Fetched 43.4 MB in 5s (8275 kB/s) Selecting previously unselected package libpython3.12-minimal:armhf. (Reading database ... 15022 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.2-5ubuntu3_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.2-5ubuntu3) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.1-2build1_armhf.deb ... Unpacking libexpat1:armhf (2.6.1-2build1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.2-5ubuntu3_armhf.deb ... Unpacking python3.12-minimal (3.12.2-5ubuntu3) ... Setting up libpython3.12-minimal:armhf (3.12.2-5ubuntu3) ... Setting up libexpat1:armhf (2.6.1-2build1) ... Setting up python3.12-minimal (3.12.2-5ubuntu3) ... Selecting previously unselected package python3-minimal. (Reading database ... 15340 files and directories currently installed.) 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Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up liblapack3:armhf (3.12.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up gettext (0.21-14ubuntu1) ... Setting up libpython3.12-stdlib:armhf (3.12.2-5ubuntu3) ... Setting up libtool (2.4.7-7) ... Setting up python3.12 (3.12.2-5ubuntu3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libpython3.12t64:armhf (3.12.2-5ubuntu3) ... Setting up dh-autoreconf (20) ... Setting up libjs-sphinxdoc (7.2.6-6) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3build2) ... Setting up libpython3-stdlib:armhf (3.12.2-0ubuntu2) ... 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systemd_255.4-1ubuntu6 systemd-dev_255.4-1ubuntu6 systemd-sysv_255.4-1ubuntu6 sysvinit-utils_3.08-6ubuntu2 tar_1.35+dfsg-3 tzdata_2024a-1ubuntu1 ubuntu-keyring_2023.11.28.1 util-linux_2.39.3-9ubuntu4 uuid-runtime_2.39.3-9ubuntu4 xz-utils_5.6.1+really5.4.5-1 zlib1g_1:1.3.dfsg-3.1ubuntu2 zlib1g-dev_1:1.3.dfsg-3.1ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-bx Binary: python3-bx Architecture: any Version: 0.11.0-2build1 Maintainer: Ubuntu Developers Uploaders: Steffen Moeller , Michael R. 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2024 UTC gpgv: using RSA key A089FB36AAFBDAD5ACC1325069F790171A210984 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-bx_0.11.0-2build1.dsc: no acceptable signature found dpkg-source: info: extracting python-bx in /<> dpkg-source: info: unpacking python-bx_0.11.0.orig.tar.gz dpkg-source: info: unpacking python-bx_0.11.0-2build1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying post-install-testing dpkg-source: info: applying pytest8 dpkg-source: info: applying shebang.patch dpkg-source: info: applying fix_BIN_OFFSETS_MAX Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-28010029 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-28010029 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-28010029 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package python-bx dpkg-buildpackage: info: source version 0.11.0-2build1 dpkg-buildpackage: info: source distribution noble dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean find -name "*.pyx" | sed 's/pyx$/c/' | xargs rm -f grep -rli "Generated by Cython" lib/ | xargs -r rm rm -rf lib/bx_python.egg-info make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild dh_auto_build -a -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /<>/.pybuild/cpython3_3.12_bx-python * Building wheel... running bdist_wheel running build running build_py creating build creating build/lib.linux-armv7l-cpython-312 copying lib/psyco_full.py -> build/lib.linux-armv7l-cpython-312 creating build/lib.linux-armv7l-cpython-312/bx_extras copying lib/bx_extras/stats.py -> build/lib.linux-armv7l-cpython-312/bx_extras copying lib/bx_extras/fpconst_tests.py -> build/lib.linux-armv7l-cpython-312/bx_extras copying lib/bx_extras/lrucache.py -> build/lib.linux-armv7l-cpython-312/bx_extras copying lib/bx_extras/__init__.py -> build/lib.linux-armv7l-cpython-312/bx_extras copying lib/bx_extras/pyparsing.py -> build/lib.linux-armv7l-cpython-312/bx_extras copying lib/bx_extras/fpconst.py -> build/lib.linux-armv7l-cpython-312/bx_extras copying lib/bx_extras/pstat.py -> build/lib.linux-armv7l-cpython-312/bx_extras creating build/lib.linux-armv7l-cpython-312/bx copying lib/bx/binned_array.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/interval_index_file.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/bitset_tests.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/gene_reader.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/interval_index_file_tests.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/seqmapping_tests.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/__init__.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/seqmapping.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/bitset_utils.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/bitset_builders.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/wiggle.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/wiggle_tests.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/filter.py -> build/lib.linux-armv7l-cpython-312/bx copying lib/bx/binned_array_tests.py -> build/lib.linux-armv7l-cpython-312/bx creating build/lib.linux-armv7l-cpython-312/bx/bbi copying lib/bx/bbi/bigwig_tests.py -> build/lib.linux-armv7l-cpython-312/bx/bbi copying lib/bx/bbi/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/bbi creating build/lib.linux-armv7l-cpython-312/bx/intseq copying lib/bx/intseq/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/intseq creating build/lib.linux-armv7l-cpython-312/bx/intervals copying lib/bx/intervals/random_intervals.py -> build/lib.linux-armv7l-cpython-312/bx/intervals copying lib/bx/intervals/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/intervals copying lib/bx/intervals/io.py -> build/lib.linux-armv7l-cpython-312/bx/intervals copying lib/bx/intervals/intersection_tests.py -> build/lib.linux-armv7l-cpython-312/bx/intervals copying lib/bx/intervals/cluster_tests.py -> build/lib.linux-armv7l-cpython-312/bx/intervals creating build/lib.linux-armv7l-cpython-312/bx/motif copying lib/bx/motif/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/motif copying lib/bx/motif/pwm_tests.py -> build/lib.linux-armv7l-cpython-312/bx/motif copying lib/bx/motif/pwm.py -> build/lib.linux-armv7l-cpython-312/bx/motif creating build/lib.linux-armv7l-cpython-312/bx/align copying lib/bx/align/maf.py -> build/lib.linux-armv7l-cpython-312/bx/align copying lib/bx/align/axt.py -> build/lib.linux-armv7l-cpython-312/bx/align copying lib/bx/align/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/align copying lib/bx/align/epo.py -> build/lib.linux-armv7l-cpython-312/bx/align copying lib/bx/align/score.py -> build/lib.linux-armv7l-cpython-312/bx/align copying lib/bx/align/epo_tests.py -> build/lib.linux-armv7l-cpython-312/bx/align copying lib/bx/align/lav.py -> build/lib.linux-armv7l-cpython-312/bx/align copying lib/bx/align/maf_tests.py -> build/lib.linux-armv7l-cpython-312/bx/align copying lib/bx/align/lav_tests.py -> build/lib.linux-armv7l-cpython-312/bx/align copying lib/bx/align/score_tests.py -> build/lib.linux-armv7l-cpython-312/bx/align copying lib/bx/align/core.py -> build/lib.linux-armv7l-cpython-312/bx/align creating build/lib.linux-armv7l-cpython-312/bx/seq copying lib/bx/seq/seq.py -> build/lib.linux-armv7l-cpython-312/bx/seq copying lib/bx/seq/nib_tests.py -> build/lib.linux-armv7l-cpython-312/bx/seq copying lib/bx/seq/twobit_tests.py -> build/lib.linux-armv7l-cpython-312/bx/seq copying lib/bx/seq/fasta_tests.py -> build/lib.linux-armv7l-cpython-312/bx/seq copying lib/bx/seq/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/seq copying lib/bx/seq/twobit.py -> build/lib.linux-armv7l-cpython-312/bx/seq copying lib/bx/seq/seq_tests.py -> build/lib.linux-armv7l-cpython-312/bx/seq copying lib/bx/seq/qdna.py -> build/lib.linux-armv7l-cpython-312/bx/seq copying lib/bx/seq/nib.py -> build/lib.linux-armv7l-cpython-312/bx/seq copying lib/bx/seq/fasta.py -> build/lib.linux-armv7l-cpython-312/bx/seq copying lib/bx/seq/qdna_tests.py -> build/lib.linux-armv7l-cpython-312/bx/seq copying lib/bx/seq/core.py -> build/lib.linux-armv7l-cpython-312/bx/seq creating build/lib.linux-armv7l-cpython-312/bx/arrays copying lib/bx/arrays/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/arrays copying lib/bx/arrays/array_tree_tests.py -> build/lib.linux-armv7l-cpython-312/bx/arrays creating build/lib.linux-armv7l-cpython-312/bx/pwm copying lib/bx/pwm/pwm_score_positions.py -> build/lib.linux-armv7l-cpython-312/bx/pwm copying lib/bx/pwm/maf_select_motifs.py -> build/lib.linux-armv7l-cpython-312/bx/pwm copying lib/bx/pwm/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/pwm copying lib/bx/pwm/pwm_score_maf.py -> build/lib.linux-armv7l-cpython-312/bx/pwm copying lib/bx/pwm/bed_score_aligned_string.py -> build/lib.linux-armv7l-cpython-312/bx/pwm copying lib/bx/pwm/pwm_tests.py -> build/lib.linux-armv7l-cpython-312/bx/pwm copying lib/bx/pwm/position_weight_matrix.py -> build/lib.linux-armv7l-cpython-312/bx/pwm copying lib/bx/pwm/bed_score_aligned_pwm.py -> build/lib.linux-armv7l-cpython-312/bx/pwm copying lib/bx/pwm/pwm_score_motifs.py -> build/lib.linux-armv7l-cpython-312/bx/pwm creating build/lib.linux-armv7l-cpython-312/bx/phylo copying lib/bx/phylo/phast_tests.py -> build/lib.linux-armv7l-cpython-312/bx/phylo copying lib/bx/phylo/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/phylo copying lib/bx/phylo/newick.py -> build/lib.linux-armv7l-cpython-312/bx/phylo copying lib/bx/phylo/newick_tests.py -> build/lib.linux-armv7l-cpython-312/bx/phylo copying lib/bx/phylo/phast.py -> build/lib.linux-armv7l-cpython-312/bx/phylo creating build/lib.linux-armv7l-cpython-312/bx/misc copying lib/bx/misc/readlengths.py -> build/lib.linux-armv7l-cpython-312/bx/misc copying lib/bx/misc/seeklzop.py -> build/lib.linux-armv7l-cpython-312/bx/misc copying lib/bx/misc/seekbzip2_tests.py -> build/lib.linux-armv7l-cpython-312/bx/misc copying lib/bx/misc/filecache_tests.py -> build/lib.linux-armv7l-cpython-312/bx/misc copying lib/bx/misc/cdb_tests.py -> build/lib.linux-armv7l-cpython-312/bx/misc copying lib/bx/misc/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/misc copying lib/bx/misc/seekbzip2.py -> build/lib.linux-armv7l-cpython-312/bx/misc copying lib/bx/misc/seeklzop_tests.py -> build/lib.linux-armv7l-cpython-312/bx/misc copying lib/bx/misc/binary_file.py -> build/lib.linux-armv7l-cpython-312/bx/misc copying lib/bx/misc/cdb.py -> build/lib.linux-armv7l-cpython-312/bx/misc copying lib/bx/misc/filecache.py -> build/lib.linux-armv7l-cpython-312/bx/misc copying lib/bx/misc/bgzf_tests.py -> build/lib.linux-armv7l-cpython-312/bx/misc creating build/lib.linux-armv7l-cpython-312/bx/cookbook copying lib/bx/cookbook/progress_bar.py -> build/lib.linux-armv7l-cpython-312/bx/cookbook copying lib/bx/cookbook/attribute.py -> build/lib.linux-armv7l-cpython-312/bx/cookbook copying lib/bx/cookbook/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/cookbook copying lib/bx/cookbook/argparse.py -> build/lib.linux-armv7l-cpython-312/bx/cookbook copying lib/bx/cookbook/doc_optparse.py -> build/lib.linux-armv7l-cpython-312/bx/cookbook creating build/lib.linux-armv7l-cpython-312/bx/tabular copying lib/bx/tabular/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/tabular copying lib/bx/tabular/io.py -> build/lib.linux-armv7l-cpython-312/bx/tabular creating build/lib.linux-armv7l-cpython-312/bx/intervals/operations copying lib/bx/intervals/operations/join.py -> build/lib.linux-armv7l-cpython-312/bx/intervals/operations copying lib/bx/intervals/operations/quicksect.py -> build/lib.linux-armv7l-cpython-312/bx/intervals/operations copying lib/bx/intervals/operations/complement.py -> build/lib.linux-armv7l-cpython-312/bx/intervals/operations copying lib/bx/intervals/operations/concat.py -> build/lib.linux-armv7l-cpython-312/bx/intervals/operations copying lib/bx/intervals/operations/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/intervals/operations copying lib/bx/intervals/operations/merge.py -> build/lib.linux-armv7l-cpython-312/bx/intervals/operations copying lib/bx/intervals/operations/intersect.py -> build/lib.linux-armv7l-cpython-312/bx/intervals/operations copying lib/bx/intervals/operations/find_clusters.py -> build/lib.linux-armv7l-cpython-312/bx/intervals/operations copying lib/bx/intervals/operations/base_coverage.py -> build/lib.linux-armv7l-cpython-312/bx/intervals/operations copying lib/bx/intervals/operations/coverage.py -> build/lib.linux-armv7l-cpython-312/bx/intervals/operations copying lib/bx/intervals/operations/subtract.py -> build/lib.linux-armv7l-cpython-312/bx/intervals/operations creating build/lib.linux-armv7l-cpython-312/bx/motif/logo copying lib/bx/motif/logo/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/motif/logo creating build/lib.linux-armv7l-cpython-312/bx/motif/io copying lib/bx/motif/io/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/motif/io copying lib/bx/motif/io/transfac.py -> build/lib.linux-armv7l-cpython-312/bx/motif/io copying lib/bx/motif/io/transfac_tests.py -> build/lib.linux-armv7l-cpython-312/bx/motif/io creating build/lib.linux-armv7l-cpython-312/bx/align/tools copying lib/bx/align/tools/fuse.py -> build/lib.linux-armv7l-cpython-312/bx/align/tools copying lib/bx/align/tools/thread.py -> build/lib.linux-armv7l-cpython-312/bx/align/tools copying lib/bx/align/tools/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/align/tools copying lib/bx/align/tools/chop.py -> build/lib.linux-armv7l-cpython-312/bx/align/tools copying lib/bx/align/tools/tile.py -> build/lib.linux-armv7l-cpython-312/bx/align/tools creating build/lib.linux-armv7l-cpython-312/bx/align/sitemask copying lib/bx/align/sitemask/__init__.py -> build/lib.linux-armv7l-cpython-312/bx/align/sitemask copying lib/bx/align/sitemask/quality.py -> build/lib.linux-armv7l-cpython-312/bx/align/sitemask copying lib/bx/align/sitemask/cpg.py -> build/lib.linux-armv7l-cpython-312/bx/align/sitemask copying lib/bx/align/sitemask/sitemask_tests.py -> build/lib.linux-armv7l-cpython-312/bx/align/sitemask copying lib/bx/align/sitemask/core.py -> build/lib.linux-armv7l-cpython-312/bx/align/sitemask copying lib/bx/motif/logo/template.ps -> build/lib.linux-armv7l-cpython-312/bx/motif/logo running build_ext /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<>/lib/bx/bitset.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/bitset.pyx because it changed. [1/1] Cythonizing lib/bx/bitset.pyx building 'bx.bitset' extension creating build/temp.linux-armv7l-cpython-312 creating build/temp.linux-armv7l-cpython-312/lib creating build/temp.linux-armv7l-cpython-312/lib/bx creating build/temp.linux-armv7l-cpython-312/src creating build/temp.linux-armv7l-cpython-312/src/kent arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.12 -c lib/bx/bitset.c -o build/temp.linux-armv7l-cpython-312/lib/bx/bitset.o arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.12 -c src/binBits.c -o build/temp.linux-armv7l-cpython-312/src/binBits.o arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.12 -c src/kent/bits.c -o build/temp.linux-armv7l-cpython-312/src/kent/bits.o src/kent/bits.c:9:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 9 | static char const rcsid[] = "$Id: bits.c,v 1.20 2008/03/25 16:32:31 angie Exp $"; | ^~~~~ arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.12 -c src/kent/common.c -o build/temp.linux-armv7l-cpython-312/src/kent/common.o arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 build/temp.linux-armv7l-cpython-312/lib/bx/bitset.o build/temp.linux-armv7l-cpython-312/src/binBits.o build/temp.linux-armv7l-cpython-312/src/kent/bits.o build/temp.linux-armv7l-cpython-312/src/kent/common.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-312/bx/bitset.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<>/lib/bx/intervals/intersection.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/intervals/intersection.pyx because it changed. [1/1] Cythonizing lib/bx/intervals/intersection.pyx building 'bx.intervals.intersection' extension creating build/temp.linux-armv7l-cpython-312/lib/bx/intervals arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -I/usr/include/python3.12 -c lib/bx/intervals/intersection.c -o build/temp.linux-armv7l-cpython-312/lib/bx/intervals/intersection.o arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 build/temp.linux-armv7l-cpython-312/lib/bx/intervals/intersection.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-312/bx/intervals/intersection.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<>/lib/bx/align/_core.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/align/_core.pyx because it changed. [1/1] Cythonizing lib/bx/align/_core.pyx building 'bx.align._core' extension creating build/temp.linux-armv7l-cpython-312/lib/bx/align arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -I/usr/include/python3.12 -c lib/bx/align/_core.c -o build/temp.linux-armv7l-cpython-312/lib/bx/align/_core.o arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 build/temp.linux-armv7l-cpython-312/lib/bx/align/_core.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-312/bx/align/_core.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<>/lib/bx/seq/_nib.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/seq/_nib.pyx because it changed. [1/1] Cythonizing lib/bx/seq/_nib.pyx building 'bx.seq._nib' extension creating build/temp.linux-armv7l-cpython-312/lib/bx/seq arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -I/usr/include/python3.12 -c lib/bx/seq/_nib.c -o build/temp.linux-armv7l-cpython-312/lib/bx/seq/_nib.o arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 build/temp.linux-armv7l-cpython-312/lib/bx/seq/_nib.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-312/bx/seq/_nib.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<>/lib/bx/seq/_twobit.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/seq/_twobit.pyx because it changed. [1/1] Cythonizing lib/bx/seq/_twobit.pyx building 'bx.seq._twobit' extension arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -I/usr/include/python3.12 -c lib/bx/seq/_twobit.c -o build/temp.linux-armv7l-cpython-312/lib/bx/seq/_twobit.o arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 build/temp.linux-armv7l-cpython-312/lib/bx/seq/_twobit.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-312/bx/seq/_twobit.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<>/lib/bx/_seqmapping.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/_seqmapping.pyx because it changed. [1/1] Cythonizing lib/bx/_seqmapping.pyx building 'bx._seqmapping' extension arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -I/usr/include/python3.12 -c lib/bx/_seqmapping.c -o build/temp.linux-armv7l-cpython-312/lib/bx/_seqmapping.o lib/bx/_seqmapping.c: In function ‘__pyx_pf_2bx_11_seqmapping_21CharToIntArrayMapping_6translate’: lib/bx/_seqmapping.c:3590:3: warning: ‘PyObject_AsWriteBuffer’ is deprecated [-Wdeprecated-declarations] 3590 | __pyx_t_1 = PyObject_AsWriteBuffer(__pyx_v_rval, ((void **)(&__pyx_v_t_buf)), (&__pyx_v_t_len)); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(0, 54, __pyx_L1_error) | ^~~~~~~~~ In file included from /usr/include/python3.12/Python.h:100, from lib/bx/_seqmapping.c:29: /usr/include/python3.12/abstract.h:380:17: note: declared here 380 | PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, | ^~~~~~~~~~~~~~~~~~~~~~ lib/bx/_seqmapping.c: In function ‘__pyx_pf_2bx_11_seqmapping_21CharToIntArrayMapping_8translate_list’: lib/bx/_seqmapping.c:3850:3: warning: ‘PyObject_AsWriteBuffer’ is deprecated [-Wdeprecated-declarations] 3850 | __pyx_t_7 = PyObject_AsWriteBuffer(__pyx_v_rval, ((void **)(&__pyx_v_t_buf)), (&__pyx_v_t_len)); if (unlikely(__pyx_t_7 == ((int)-1))) __PYX_ERR(0, 77, __pyx_L1_error) | ^~~~~~~~~ /usr/include/python3.12/abstract.h:380:17: note: declared here 380 | PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, | ^~~~~~~~~~~~~~~~~~~~~~ lib/bx/_seqmapping.c: In function ‘__pyx_pf_2bx_11_seqmapping_15IntToIntMapping_6translate’: lib/bx/_seqmapping.c:5288:3: warning: ‘PyObject_AsReadBuffer’ is deprecated [-Wdeprecated-declarations] 5288 | __pyx_t_1 = PyObject_AsReadBuffer(__pyx_v_src, ((void const **)(&__pyx_v_s_buf)), (&__pyx_v_s_len)); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(0, 134, __pyx_L1_error) | ^~~~~~~~~ /usr/include/python3.12/abstract.h:369:17: note: declared here 369 | PyAPI_FUNC(int) PyObject_AsReadBuffer(PyObject *obj, | ^~~~~~~~~~~~~~~~~~~~~ lib/bx/_seqmapping.c:5368:3: warning: ‘PyObject_AsWriteBuffer’ is deprecated [-Wdeprecated-declarations] 5368 | __pyx_t_1 = PyObject_AsWriteBuffer(__pyx_v_rval, ((void **)(&__pyx_v_t_buf)), (&__pyx_v_t_len)); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(0, 139, __pyx_L1_error) | ^~~~~~~~~ /usr/include/python3.12/abstract.h:380:17: note: declared here 380 | PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, | ^~~~~~~~~~~~~~~~~~~~~~ In function ‘__pyx_pf_2bx_11_seqmapping_15IntToIntMapping___cinit__’, inlined from ‘__pyx_pw_2bx_11_seqmapping_15IntToIntMapping_1__cinit__’ at lib/bx/_seqmapping.c:4790:13, inlined from ‘__pyx_tp_new_2bx_11_seqmapping_IntToIntMapping’ at lib/bx/_seqmapping.c:7626:7: lib/bx/_seqmapping.c:4828:33: warning: argument 1 value ‘4294967292’ exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 4828 | __pyx_v_self->table = ((int *)malloc((__pyx_v_in_size * (sizeof(int))))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/python3.12/Python.h:23: /usr/include/stdlib.h: In function ‘__pyx_tp_new_2bx_11_seqmapping_IntToIntMapping’: /usr/include/stdlib.h:672:14: note: in a call to allocation function ‘malloc’ declared here 672 | extern void *malloc (size_t __size) __THROW __attribute_malloc__ | ^~~~~~ arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 build/temp.linux-armv7l-cpython-312/lib/bx/_seqmapping.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-312/bx/_seqmapping.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<>/lib/bx/misc/bgzf.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/misc/bgzf.pyx because it changed. [1/1] Cythonizing lib/bx/misc/bgzf.pyx building 'bx.misc.bgzf' extension creating build/temp.linux-armv7l-cpython-312/lib/bx/misc creating build/temp.linux-armv7l-cpython-312/src/samtools arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -Isrc/samtools -I/usr/include/python3.12 -c lib/bx/misc/bgzf.c -o build/temp.linux-armv7l-cpython-312/lib/bx/misc/bgzf.o arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -Isrc/samtools -I/usr/include/python3.12 -c src/samtools/bgzf.c -o build/temp.linux-armv7l-cpython-312/src/samtools/bgzf.o src/samtools/bgzf.c: In function ‘cache_block’: src/samtools/bgzf.c:422:47: warning: comparison of integer expressions of different signedness: ‘khint_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 422 | if ((kh_size(h) + 1) * MAX_BLOCK_SIZE > fp->cache_size) { | ^ src/samtools/bgzf.c: In function ‘read_block’: src/samtools/bgzf.c:462:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 462 | if (count != sizeof(header)) { | ^~ src/samtools/bgzf.c: In function ‘bgzf_close’: src/samtools/bgzf.c:603:29: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 603 | int count, block_length = deflate_block(fp, 0); | ^~~~~ src/samtools/bgzf.c: In function ‘bgzf_check_EOF’: src/samtools/bgzf.c:662:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 662 | fread(buf, 1, 28, fp->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 build/temp.linux-armv7l-cpython-312/lib/bx/misc/bgzf.o build/temp.linux-armv7l-cpython-312/src/samtools/bgzf.o -L/usr/lib/arm-linux-gnueabihf -lz -o build/lib.linux-armv7l-cpython-312/bx/misc/bgzf.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<>/lib/bx/intervals/cluster.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/intervals/cluster.pyx because it changed. [1/1] Cythonizing lib/bx/intervals/cluster.pyx building 'bx.intervals.cluster' extension arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -Isrc -I/usr/include/python3.12 -c lib/bx/intervals/cluster.c -o build/temp.linux-armv7l-cpython-312/lib/bx/intervals/cluster.o arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -Isrc -I/usr/include/python3.12 -c src/cluster.c -o build/temp.linux-armv7l-cpython-312/src/cluster.o arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 build/temp.linux-armv7l-cpython-312/lib/bx/intervals/cluster.o build/temp.linux-armv7l-cpython-312/src/cluster.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-312/bx/intervals/cluster.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /<>/lib/bx/pwm/_position_weight_matrix.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/pwm/_position_weight_matrix.pyx because it changed. [1/1] Cythonizing lib/bx/pwm/_position_weight_matrix.pyx building 'bx.pwm._position_weight_matrix' extension creating build/temp.linux-armv7l-cpython-312/lib/bx/pwm arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -Isrc -I/usr/include/python3.12 -c lib/bx/pwm/_position_weight_matrix.c -o build/temp.linux-armv7l-cpython-312/lib/bx/pwm/_position_weight_matrix.o arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/python-bx-0.11.0-2build1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3 -fPIC -Isrc -I/usr/include/python3.12 -c src/pwm_utils.c -o build/temp.linux-armv7l-cpython-312/src/pwm_utils.o src/pwm_utils.c: In function ‘main’: src/pwm_utils.c:11:27: error: implicit declaration of function ‘strlen’ [-Werror=implicit-function-declaration] 11 | int string_size = strlen(argv[1]); | ^~~~~~ src/pwm_utils.c:5:1: note: include ‘’ or provide a declaration of ‘strlen’ 4 | #include +++ |+#include 5 | src/pwm_utils.c:11:27: warning: incompatible implicit declaration of built-in function ‘strlen’ [-Wbuiltin-declaration-mismatch] 11 | int string_size = strlen(argv[1]); | ^~~~~~ src/pwm_utils.c:11:27: note: include ‘’ or provide a declaration of ‘strlen’ src/pwm_utils.c:12:29: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 12 | if (strlen(argv[2]) != string_size) { | ^~ cc1: some warnings being treated as errors error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 ERROR Backend subprocess exited when trying to invoke build_wheel E: pybuild pybuild:389: build: plugin pyproject failed with: exit code=1: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /<>/.pybuild/cpython3_3.12_bx-python dh_auto_build: error: pybuild --build -i python{version} -p 3.12 returned exit code 13 make: *** [debian/rules:15: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2024-04-05T03:41:09Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: 16988 Build-Time: 87 Distribution: noble-proposed Fail-Stage: build Host Architecture: armhf Install-Time: 51 Job: python-bx_0.11.0-2build1.dsc Machine Architecture: arm64 Package: python-bx Package-Time: 141 Source-Version: 0.11.0-2build1 Space: 16988 Status: attempted Version: 0.11.0-2build1 -------------------------------------------------------------------------------- Finished at 2024-04-05T03:41:09Z Build needed 00:02:21, 16988k disk space E: Build failure (dpkg-buildpackage died) RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-28010029 Scanning for processes to kill in build PACKAGEBUILD-28010029