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libedlib package

libedlib 1.2.7-5 source package in Ubuntu

Changelog

libedlib (1.2.7-5) unstable; urgency=medium

  * Team upload.
  * Standards-Version: 4.6.2 (routine-update)
  * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
  * d/clean: Remove generated files and folders from build (Closes: #1048671)

 -- Lance Lin <email address hidden>  Mon, 26 Feb 2024 19:59:36 +0700

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

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File Size SHA-256 Checksum
libedlib_1.2.7-5.dsc 2.2 KiB 9f631e243c18cb897bd37f4fed6b1f5bc17360c6e9f4423007dd41d15a0ea60a
libedlib_1.2.7.orig.tar.gz 4.1 MiB 8767bc1b04a1a67282d57662e5702c4908996e96b1753b5520921ff189974621
libedlib_1.2.7-5.debian.tar.xz 7.3 KiB 7ce82ee4878d2dd0dea5023e1df8111f154de47be8c43a6ba6178d62db3ee13a

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Binary packages built by this source

edlib-aligner: edlib sequence alignment tool using edit distance

 Edlib is a lightweight and super fast C/C++ library for sequence
 alignment using edit distance. This package provides an aligner
 using this library.
 .
 Features of libedlib
 .
  * Calculates edit distance (Levehnstein distance).
  * It can find optimal alignment path (instructions how to transform
    first sequence into the second sequence).
  * It can find just the start and/or end locations of alignment path -
    can be useful when speed is more important than having exact
    alignment path.
  * Supports multiple alignment methods: global(NW), prefix(SHW) and
    infix(HW), each of them useful for different scenarios.
  * You can extend character equality definition, enabling you to e.g.
    have wildcard characters, to have case insensitive alignment or to
    work with degenerate nucleotides.
  * It can easily handle small or very large sequences, even when finding
    alignment path, while consuming very little memory.
  * Super fast thanks to Myers's bit-vector algorithm.

edlib-aligner-dbgsym: debug symbols for edlib-aligner
libedlib-dev: library for sequence alignment using edit distance (devel)

 A lightweight and super fast C/C++ library for sequence alignment using
 edit distance.
 .
 Calculating edit distance of two strings is as simple as:
 .
  edlibAlign("hello", 5, "world!", 6,
             edlibDefaultAlignConfig()).editDistance;
 Features
 .
  * Calculates edit distance (Levehnstein distance).
  * It can find optimal alignment path (instructions how to transform
    first sequence into the second sequence).
  * It can find just the start and/or end locations of alignment path -
    can be useful when speed is more important than having exact
    alignment path.
  * Supports multiple alignment methods: global(NW), prefix(SHW) and
    infix(HW), each of them useful for different scenarios.
  * You can extend character equality definition, enabling you to e.g.
    have wildcard characters, to have case insensitive alignment or to
    work with degenerate nucleotides.
  * It can easily handle small or very large sequences, even when finding
    alignment path, while consuming very little memory.
  * Super fast thanks to Myers's bit-vector algorithm.
 .
 This package contains the static library and the header files.

libedlib1: library for sequence alignment using edit distance

 A lightweight and super fast C/C++ library for sequence alignment using
 edit distance.
 .
 Calculating edit distance of two strings is as simple as:
 .
  edlibAlign("hello", 5, "world!", 6,
             edlibDefaultAlignConfig()).editDistance;
 Features
 .
  * Calculates edit distance (Levehnstein distance).
  * It can find optimal alignment path (instructions how to transform
    first sequence into the second sequence).
  * It can find just the start and/or end locations of alignment path -
    can be useful when speed is more important than having exact
    alignment path.
  * Supports multiple alignment methods: global(NW), prefix(SHW) and
    infix(HW), each of them useful for different scenarios.
  * You can extend character equality definition, enabling you to e.g.
    have wildcard characters, to have case insensitive alignment or to
    work with degenerate nucleotides.
  * It can easily handle small or very large sequences, even when finding
    alignment path, while consuming very little memory.
  * Super fast thanks to Myers's bit-vector algorithm.
 .
 This package contains the shared library.

libedlib1-dbgsym: debug symbols for libedlib1
python3-edlib: library for sequence alignment using edit distance (Python3 module)

 A lightweight and super fast C/C++ library for sequence alignment using
 edit distance.
 .
 Calculating edit distance of two strings is as simple as:
 .
  edlibAlign("hello", 5, "world!", 6,
             edlibDefaultAlignConfig()).editDistance;
 Features
 .
  * Calculates edit distance (Levehnstein distance).
  * It can find optimal alignment path (instructions how to transform
    first sequence into the second sequence).
  * It can find just the start and/or end locations of alignment path -
    can be useful when speed is more important than having exact
    alignment path.
  * Supports multiple alignment methods: global(NW), prefix(SHW) and
    infix(HW), each of them useful for different scenarios.
  * You can extend character equality definition, enabling you to e.g.
    have wildcard characters, to have case insensitive alignment or to
    work with degenerate nucleotides.
  * It can easily handle small or very large sequences, even when finding
    alignment path, while consuming very little memory.
  * Super fast thanks to Myers's bit-vector algorithm.
 .
 This package contains the Python3 module.

python3-edlib-dbgsym: debug symbols for python3-edlib