libedlib 1.2.4-2ubuntu5 source package in Ubuntu
Changelog
libedlib (1.2.4-2ubuntu5) jammy; urgency=medium * Mark more symbols optional -- Graham Inggs <email address hidden> Wed, 03 Nov 2021 20:06:43 +0000
Upload details
- Uploaded by:
- Graham Inggs
- Uploaded to:
- Jammy
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section |
---|
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
libedlib_1.2.4.orig.tar.gz | 4.1 MiB | ddc6892a41d7e4bcee048f282738b1522b67252ec276e4d75284b977fa8eb65d |
libedlib_1.2.4-2ubuntu5.debian.tar.xz | 6.0 KiB | 36c7ca9c4a1b0cd7d7532bcf46884afbc15b1c23d3568a06d0385ffc694af0de |
libedlib_1.2.4-2ubuntu5.dsc | 2.2 KiB | 7e38815e5859a6c6665d2cf876a69810d274c1cab45f2109f2a60631c5b6566e |
Available diffs
- diff from 1.2.4-2ubuntu3 to 1.2.4-2ubuntu5 (641 bytes)
- diff from 1.2.4-2ubuntu4 to 1.2.4-2ubuntu5 (574 bytes)
Binary packages built by this source
- edlib-aligner: edlib sequence alignment tool using edit distance
Edlib is a lightweight and super fast C/C++ library for sequence
alignment using edit distance. This package provides an aligner
using this library.
.
Features of libedlib
.
* Calculates edit distance (Levehnstein distance).
* It can find optimal alignment path (instructions how to transform
first sequence into the second sequence).
* It can find just the start and/or end locations of alignment path -
can be useful when speed is more important than having exact
alignment path.
* Supports multiple alignment methods: global(NW), prefix(SHW) and
infix(HW), each of them useful for different scenarios.
* You can extend character equality definition, enabling you to e.g.
have wildcard characters, to have case insensitive alignment or to
work with degenerate nucleotides.
* It can easily handle small or very large sequences, even when finding
alignment path, while consuming very little memory.
* Super fast thanks to Myers's bit-vector algorithm.
- edlib-aligner-dbgsym: debug symbols for edlib-aligner
- libedlib-dev: library for sequence alignment using edit distance (devel)
A lightweight and super fast C/C++ library for sequence alignment using
edit distance.
.
Calculating edit distance of two strings is as simple as:
.
edlibAlign("hello" , 5, "world!", 6,
edlibDefa ultAlignConfig( )).editDistance ;
Features
.
* Calculates edit distance (Levehnstein distance).
* It can find optimal alignment path (instructions how to transform
first sequence into the second sequence).
* It can find just the start and/or end locations of alignment path -
can be useful when speed is more important than having exact
alignment path.
* Supports multiple alignment methods: global(NW), prefix(SHW) and
infix(HW), each of them useful for different scenarios.
* You can extend character equality definition, enabling you to e.g.
have wildcard characters, to have case insensitive alignment or to
work with degenerate nucleotides.
* It can easily handle small or very large sequences, even when finding
alignment path, while consuming very little memory.
* Super fast thanks to Myers's bit-vector algorithm.
.
This package contains the static library and the header files.
- libedlib0: No summary available for libedlib0 in ubuntu jammy.
No description available for libedlib0 in ubuntu jammy.
- libedlib0-dbgsym: No summary available for libedlib0-dbgsym in ubuntu jammy.
No description available for libedlib0-dbgsym in ubuntu jammy.
- python3-edlib: library for sequence alignment using edit distance (Python3 module)
A lightweight and super fast C/C++ library for sequence alignment using
edit distance.
.
Calculating edit distance of two strings is as simple as:
.
edlibAlign("hello" , 5, "world!", 6,
edlibDefa ultAlignConfig( )).editDistance ;
Features
.
* Calculates edit distance (Levehnstein distance).
* It can find optimal alignment path (instructions how to transform
first sequence into the second sequence).
* It can find just the start and/or end locations of alignment path -
can be useful when speed is more important than having exact
alignment path.
* Supports multiple alignment methods: global(NW), prefix(SHW) and
infix(HW), each of them useful for different scenarios.
* You can extend character equality definition, enabling you to e.g.
have wildcard characters, to have case insensitive alignment or to
work with degenerate nucleotides.
* It can easily handle small or very large sequences, even when finding
alignment path, while consuming very little memory.
* Super fast thanks to Myers's bit-vector algorithm.
.
This package contains the Python3 module.
- python3-edlib-dbgsym: debug symbols for python3-edlib