bowtie 1.2.2+dfsg-1 source package in Ubuntu

Changelog

bowtie (1.2.2+dfsg-1) unstable; urgency=medium

  * New upstream version 1.2.2~beta+dfsg
  * Refresh patches
  * New upstream version 1.2.2+dfsg
  * Refresh patches
  * Bump Standards-Version to 4.1.2
  * Update copyright, note license change to Artistic License 2.0

 -- Alexandre Mestiashvili <email address hidden>  Sat, 16 Dec 2017 19:17:18 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any-amd64 alpha arm64 mips64el ppc64 ppc64el s390x sparc64 all
Section:
science
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
bowtie_1.2.2+dfsg-1.dsc 2.3 KiB a73d5e621a5e8a0e47aab1499c8aa9ab5036a8e44bcb510e25e6baa6728468be
bowtie_1.2.2+dfsg.orig.tar.xz 6.4 MiB c088d301b60d27e4201c705c9cbb899fe1bc270c87c37dd2017ee73bb2e4807f
bowtie_1.2.2+dfsg-1.debian.tar.xz 19.0 KiB ff3da60c64a1b0d11d72cadf8091cb9061b3978ab00e2d901bb91ee17e2b1085

Available diffs

No changes file available.

Binary packages built by this source

bowtie: Ultrafast memory-efficient short read aligner

 This package addresses the problem to interpret the results from the
 latest (2010) DNA sequencing technologies. Those will yield fairly
 short stretches and those cannot be interpreted directly. It is the
 challenge for tools like Bowtie to give a chromosomal location to the
 short stretches of DNA sequenced per run.
 .
 Bowtie aligns short DNA sequences (reads) to the human genome at a rate
 of over 25 million 35-bp reads per hour. Bowtie indexes the genome with
 a Burrows-Wheeler index to keep its memory footprint small: typically
 about 2.2 GB for the human genome (2.9 GB for paired-end).

bowtie-dbgsym: debug symbols for bowtie
bowtie-examples: Examples for bowtie, the ultrafast memory-efficient short read aligner

 This package addresses the problem to interpret the results from the
 latest (2010) DNA sequencing technologies. Those will yield fairly
 short stretches and those cannot be interpreted directly. It is the
 challenge for tools like Bowtie to give a chromosomal location to the
 short stretches of DNA sequenced per run.
 .
 Bowtie aligns short DNA sequences (reads) to the human genome at a rate
 of over 25 million 35-bp reads per hour. Bowtie indexes the genome with
 a Burrows-Wheeler index to keep its memory footprint small: typically
 about 2.2 GB for the human genome (2.9 GB for paired-end).
 .
 This package provides some example data to work with bowtie.