https://launchpad.net/ubuntu/+archive/test-rebuild-20190614/+build/16969094 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-ppc64el-009 4.4.0-154-generic #181-Ubuntu SMP Tue Jun 25 05:29:49 UTC 2019 ppc64le Buildd toolchain package versions: launchpad-buildd_176 python-lpbuildd_176 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 29 Jun 05:45:25 ntpdate[1890]: adjust time server 10.211.37.1 offset 0.000519 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=eoan --arch=ppc64el PACKAGEBUILD-16969094 --image-type chroot /home/buildd/filecache-default/8ecade3ba39252410f2285d8b2f76e6336361d85 Creating target for build PACKAGEBUILD-16969094 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=eoan --arch=ppc64el PACKAGEBUILD-16969094 Starting target for build PACKAGEBUILD-16969094 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=eoan --arch=ppc64el PACKAGEBUILD-16969094 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan main' 'deb http://ftpmaster.internal/ubuntu eoan main restricted universe multiverse' Overriding sources.list in build-PACKAGEBUILD-16969094 RUN: /usr/share/launchpad-buildd/bin/in-target add-trusted-keys --backend=chroot --series=eoan --arch=ppc64el PACKAGEBUILD-16969094 Adding trusted keys to build-PACKAGEBUILD-16969094 Warning: apt-key output should not be parsed (stdout is not a terminal) OK Warning: apt-key output should not be parsed (stdout is not a terminal) /etc/apt/trusted.gpg -------------------- pub rsa1024 2009-10-22 [SC] 60C3 1780 3A41 BA51 845E 371A 1E93 77A2 BA9E F27F uid [ unknown] Launchpad Toolchain builds /etc/apt/trusted.gpg.d/ubuntu-keyring-2012-archive.gpg ------------------------------------------------------ pub rsa4096 2012-05-11 [SC] 790B C727 7767 219C 42C8 6F93 3B4F E6AC C0B2 1F32 uid [ unknown] Ubuntu Archive Automatic Signing Key (2012) /etc/apt/trusted.gpg.d/ubuntu-keyring-2012-cdimage.gpg ------------------------------------------------------ pub rsa4096 2012-05-11 [SC] 8439 38DF 228D 22F7 B374 2BC0 D94A A3F0 EFE2 1092 uid [ unknown] Ubuntu CD Image Automatic Signing Key (2012) /etc/apt/trusted.gpg.d/ubuntu-keyring-2018-archive.gpg ------------------------------------------------------ pub rsa4096 2018-09-17 [SC] F6EC B376 2474 EDA9 D21B 7022 8719 20D1 991B C93C uid [ unknown] Ubuntu Archive Automatic Signing Key (2018) RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=eoan --arch=ppc64el PACKAGEBUILD-16969094 Updating target for build PACKAGEBUILD-16969094 Get:1 http://ftpmaster.internal/ubuntu eoan InRelease [255 kB] Get:2 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan InRelease [20.7 kB] Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el Packages [19.5 kB] Get:4 http://ftpmaster.internal/ubuntu eoan/main ppc64el Packages [934 kB] Get:5 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main Translation-en [12.9 kB] Get:6 http://ftpmaster.internal/ubuntu eoan/main Translation-en [502 kB] Get:7 http://ftpmaster.internal/ubuntu eoan/restricted ppc64el Packages [1196 B] Get:8 http://ftpmaster.internal/ubuntu eoan/restricted Translation-en [5488 B] Get:9 http://ftpmaster.internal/ubuntu eoan/universe ppc64el Packages [8755 kB] Get:10 http://ftpmaster.internal/ubuntu eoan/universe Translation-en [5284 kB] Get:11 http://ftpmaster.internal/ubuntu eoan/multiverse ppc64el Packages [128 kB] Get:12 http://ftpmaster.internal/ubuntu eoan/multiverse Translation-en [112 kB] Fetched 16.0 MB in 3s (4650 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libapt-pkg5.0 libisl19 libreadline7 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: gcc-9-base libapt-pkg5.90 libisl21 libpcre2-8-0 libreadline8 The following packages will be upgraded: adduser advancecomp apt base-files base-passwd bash binutils binutils-common binutils-powerpc64le-linux-gnu bsdutils build-essential ca-certificates coreutils cpp cpp-8 dash debconf debianutils diffutils dmsetup dpkg dpkg-dev e2fslibs e2fsprogs fdisk findutils g++ g++-8 gcc gcc-8 gcc-8-base gpg gpg-agent gpgconf gpgv grep gzip init init-system-helpers libacl1 libapparmor1 libargon2-1 libasan5 libassuan0 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcomerr2 libcryptsetup12 libdb5.3 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libext2fs2 libfdisk1 libgcc-8-dev libgcc1 libgcrypt20 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libhogweed4 libidn11 libitm1 libjson-c3 libkmod2 liblsan0 liblz4-1 liblzma5 libmount1 libmpfr6 libncurses6 libncursesw6 libnettle6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre3 libperl5.28 libpng16-16 libprocps7 libquadmath0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libslang2 libsmartcols1 libsqlite3-0 libss2 libssl1.1 libstdc++-8-dev libstdc++6 libsystemd0 libtinfo6 libtsan0 libubsan1 libudev1 libunistring2 libuuid1 libzstd1 linux-libc-dev login lsb-base mount multiarch-support ncurses-base ncurses-bin openssl optipng passwd perl perl-base perl-modules-5.28 pinentry-curses pkgbinarymangler procps readline-common sed systemd systemd-sysv sysvinit-utils tar tzdata util-linux xz-utils zlib1g 143 upgraded, 5 newly installed, 0 to remove and 0 not upgraded. Need to get 82.5 MB of archives. After this operation, 17.9 MB of additional disk space will be used. Get:1 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el gcc-9-base ppc64el 9.1.0-4ubuntu1 [18.1 kB] Get:2 http://ftpmaster.internal/ubuntu eoan/main ppc64el libc6-dev ppc64el 2.29-0ubuntu2 [2579 kB] Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libgcc1 ppc64el 1:9.1.0-4ubuntu1 [29.6 kB] Get:4 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libstdc++6 ppc64el 9.1.0-4ubuntu1 [543 kB] Get:5 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libgomp1 ppc64el 9.1.0-4ubuntu1 [92.5 kB] Get:6 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libitm1 ppc64el 9.1.0-4ubuntu1 [29.4 kB] Get:7 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libatomic1 ppc64el 9.1.0-4ubuntu1 [9932 B] Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libasan5 ppc64el 9.1.0-4ubuntu1 [408 kB] Get:9 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el liblsan0 ppc64el 9.1.0-4ubuntu1 [148 kB] Get:10 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libtsan0 ppc64el 9.1.0-4ubuntu1 [305 kB] Get:11 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libubsan1 ppc64el 9.1.0-4ubuntu1 [140 kB] Get:12 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libquadmath0 ppc64el 9.1.0-4ubuntu1 [149 kB] Get:13 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el g++-8 ppc64el 8.3.0-14ubuntu1 [10.6 MB] Get:14 http://ftpmaster.internal/ubuntu eoan/main ppc64el libc-dev-bin ppc64el 2.29-0ubuntu2 [73.0 kB] Get:15 http://ftpmaster.internal/ubuntu eoan/main ppc64el linux-libc-dev ppc64el 5.0.0-17.18 [1055 kB] Get:16 http://ftpmaster.internal/ubuntu eoan/main ppc64el libc6 ppc64el 2.29-0ubuntu2 [2719 kB] Get:17 http://ftpmaster.internal/ubuntu eoan/main ppc64el libc-bin ppc64el 2.29-0ubuntu2 [632 kB] Get:18 http://ftpmaster.internal/ubuntu eoan/main ppc64el base-files ppc64el 10.2ubuntu3 [60.7 kB] Get:19 http://ftpmaster.internal/ubuntu eoan/main ppc64el debianutils ppc64el 4.8.6.1 [86.4 kB] Get:20 http://ftpmaster.internal/ubuntu eoan/main ppc64el bash ppc64el 5.0-4ubuntu1 [723 kB] Get:21 http://ftpmaster.internal/ubuntu eoan/main ppc64el bsdutils ppc64el 1:2.33.1-0.1ubuntu2 [69.4 kB] Get:22 http://ftpmaster.internal/ubuntu eoan/main ppc64el coreutils ppc64el 8.30-3ubuntu1 [1313 kB] Get:23 http://ftpmaster.internal/ubuntu eoan/main ppc64el lsb-base all 10.2019051400ubuntu1 [12.4 kB] Get:24 http://ftpmaster.internal/ubuntu eoan/main ppc64el tar ppc64el 1.30+dfsg-6 [288 kB] Get:25 http://ftpmaster.internal/ubuntu eoan/main ppc64el dpkg ppc64el 1.19.6ubuntu1 [1169 kB] Get:26 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el gcc-8 ppc64el 8.3.0-14ubuntu1 [10.1 MB] Get:27 http://ftpmaster.internal/ubuntu eoan/main ppc64el libperl5.28 ppc64el 5.28.1-6 [3837 kB] Get:28 http://ftpmaster.internal/ubuntu eoan/main ppc64el perl ppc64el 5.28.1-6 [204 kB] Get:29 http://ftpmaster.internal/ubuntu eoan/main ppc64el perl-base ppc64el 5.28.1-6 [1514 kB] Get:30 http://ftpmaster.internal/ubuntu eoan/main ppc64el perl-modules-5.28 all 5.28.1-6 [2818 kB] Get:31 http://ftpmaster.internal/ubuntu eoan/main ppc64el libdb5.3 ppc64el 5.3.28+dfsg1-0.6ubuntu1 [716 kB] Get:32 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libstdc++-8-dev ppc64el 8.3.0-14ubuntu1 [1601 kB] Get:33 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgdbm6 ppc64el 1.18.1-4 [31.6 kB] Get:34 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgdbm-compat4 ppc64el 1.18.1-4 [6660 B] Get:35 http://ftpmaster.internal/ubuntu eoan/main ppc64el zlib1g ppc64el 1:1.2.11.dfsg-1ubuntu2 [57.9 kB] Get:36 http://ftpmaster.internal/ubuntu eoan/main ppc64el debconf all 1.5.72 [122 kB] Get:37 http://ftpmaster.internal/ubuntu eoan/main ppc64el dash ppc64el 0.5.10.2-5 [101 kB] Get:38 http://ftpmaster.internal/ubuntu eoan/main ppc64el diffutils ppc64el 1:3.7-3 [227 kB] Get:39 http://ftpmaster.internal/ubuntu eoan/main ppc64el findutils ppc64el 4.6.0+git+20190209-2 [366 kB] Get:40 http://ftpmaster.internal/ubuntu eoan/main ppc64el grep ppc64el 3.3-1 [157 kB] Get:41 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libgcc-8-dev ppc64el 8.3.0-14ubuntu1 [1195 kB] Get:42 http://ftpmaster.internal/ubuntu eoan/main ppc64el gzip ppc64el 1.10-0ubuntu1 [108 kB] Get:43 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsmartcols1 ppc64el 2.33.1-0.1ubuntu2 [108 kB] Get:44 http://ftpmaster.internal/ubuntu eoan/main ppc64el libuuid1 ppc64el 2.33.1-0.1ubuntu2 [22.7 kB] Get:45 http://ftpmaster.internal/ubuntu eoan/main ppc64el libblkid1 ppc64el 2.33.1-0.1ubuntu2 [159 kB] Get:46 http://ftpmaster.internal/ubuntu eoan/main ppc64el libfdisk1 ppc64el 2.33.1-0.1ubuntu2 [196 kB] Get:47 http://ftpmaster.internal/ubuntu eoan/main ppc64el libpcre2-8-0 ppc64el 10.32-5 [183 kB] Get:48 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libcc1-0 ppc64el 9.1.0-4ubuntu1 [52.8 kB] Get:49 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el binutils-powerpc64le-linux-gnu ppc64el 2.32.51.20190614-0ubuntu1 [2092 kB] Get:50 http://ftpmaster.internal/ubuntu eoan/main ppc64el libselinux1 ppc64el 2.9-1 [85.4 kB] Get:51 http://ftpmaster.internal/ubuntu eoan/main ppc64el libmount1 ppc64el 2.33.1-0.1ubuntu2 [173 kB] Get:52 http://ftpmaster.internal/ubuntu eoan/main ppc64el libncurses6 ppc64el 6.1+20181013-2ubuntu2 [121 kB] Get:53 http://ftpmaster.internal/ubuntu eoan/main ppc64el libtinfo6 ppc64el 6.1+20181013-2ubuntu2 [102 kB] Get:54 http://ftpmaster.internal/ubuntu eoan/main ppc64el libncursesw6 ppc64el 6.1+20181013-2ubuntu2 [152 kB] Get:55 http://ftpmaster.internal/ubuntu eoan/main ppc64el fdisk ppc64el 2.33.1-0.1ubuntu2 [130 kB] Get:56 http://ftpmaster.internal/ubuntu eoan/main ppc64el login ppc64el 1:4.5-1.1ubuntu2 [269 kB] Get:57 http://ftpmaster.internal/ubuntu eoan/main ppc64el util-linux ppc64el 2.33.1-0.1ubuntu2 [1054 kB] Get:58 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libbinutils ppc64el 2.32.51.20190614-0ubuntu1 [519 kB] Get:59 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el binutils ppc64el 2.32.51.20190614-0ubuntu1 [3392 B] Get:60 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el binutils-common ppc64el 2.32.51.20190614-0ubuntu1 [202 kB] Get:61 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el cpp-8 ppc64el 8.3.0-14ubuntu1 [9276 kB] Get:62 http://ftpmaster.internal/ubuntu eoan/main ppc64el ncurses-bin ppc64el 6.1+20181013-2ubuntu2 [174 kB] Get:63 http://ftpmaster.internal/ubuntu eoan/main ppc64el sed ppc64el 4.7-1 [203 kB] Get:64 http://ftpmaster.internal/ubuntu eoan/main ppc64el libdebconfclient0 ppc64el 0.249ubuntu1 [6428 B] Get:65 http://ftpmaster.internal/ubuntu eoan/main ppc64el base-passwd ppc64el 3.5.46 [51.0 kB] Get:66 http://ftpmaster.internal/ubuntu eoan/main ppc64el init-system-helpers all 1.57 [38.3 kB] Get:67 http://ftpmaster.internal/ubuntu eoan/main ppc64el ncurses-base all 6.1+20181013-2ubuntu2 [17.9 kB] Get:68 http://ftpmaster.internal/ubuntu eoan/main ppc64el sysvinit-utils ppc64el 2.93-8ubuntu1 [22.7 kB] Get:69 http://ftpmaster.internal/ubuntu eoan/main ppc64el liblz4-1 ppc64el 1.8.3-1ubuntu1 [74.0 kB] Get:70 http://ftpmaster.internal/ubuntu eoan/main ppc64el liblzma5 ppc64el 5.2.4-1 [110 kB] Get:71 http://ftpmaster.internal/ubuntu eoan/main ppc64el libnettle6 ppc64el 3.4.1-1 [145 kB] Get:72 http://ftpmaster.internal/ubuntu eoan/main ppc64el libhogweed4 ppc64el 3.4.1-1 [145 kB] Get:73 http://ftpmaster.internal/ubuntu eoan/main ppc64el libp11-kit0 ppc64el 0.23.15-2 [198 kB] Get:74 http://ftpmaster.internal/ubuntu eoan/main ppc64el libunistring2 ppc64el 0.9.10-1ubuntu2 [376 kB] Get:75 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgnutls30 ppc64el 3.6.7-4ubuntu1 [765 kB] Get:76 http://ftpmaster.internal/ubuntu eoan/main ppc64el systemd-sysv ppc64el 240-6ubuntu9 [9384 B] Get:77 http://ftpmaster.internal/ubuntu eoan/main ppc64el libacl1 ppc64el 2.2.53-4 [20.8 kB] Get:78 http://ftpmaster.internal/ubuntu eoan/main ppc64el libapparmor1 ppc64el 2.13.2-9ubuntu7 [38.5 kB] Get:79 http://ftpmaster.internal/ubuntu eoan/main ppc64el libaudit-common all 1:2.8.4-3ubuntu1 [4200 B] Get:80 http://ftpmaster.internal/ubuntu eoan/main ppc64el libcap-ng0 ppc64el 0.7.9-2 [12.4 kB] Get:81 http://ftpmaster.internal/ubuntu eoan/main ppc64el libaudit1 ppc64el 1:2.8.4-3ubuntu1 [43.2 kB] Get:82 http://ftpmaster.internal/ubuntu eoan/main ppc64el libcap2 ppc64el 1:2.25-2 [14.9 kB] Get:83 http://ftpmaster.internal/ubuntu eoan/main ppc64el libargon2-1 ppc64el 0~20171227-0.2 [21.9 kB] Get:84 http://ftpmaster.internal/ubuntu eoan/main ppc64el libudev1 ppc64el 240-6ubuntu9 [78.0 kB] Get:85 http://ftpmaster.internal/ubuntu eoan/main ppc64el libdevmapper1.02.1 ppc64el 2:1.02.155-2ubuntu4 [156 kB] Get:86 http://ftpmaster.internal/ubuntu eoan/main ppc64el libjson-c3 ppc64el 0.12.1+ds-2 [24.8 kB] Get:87 http://ftpmaster.internal/ubuntu eoan/main ppc64el libssl1.1 ppc64el 1.1.1c-1ubuntu3 [1369 kB] Get:88 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el gcc-8-base ppc64el 8.3.0-14ubuntu1 [18.2 kB] Get:89 http://ftpmaster.internal/ubuntu eoan/main ppc64el libcryptsetup12 ppc64el 2:2.1.0-5ubuntu1 [183 kB] Get:90 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgpg-error0 ppc64el 1.36-1 [69.8 kB] Get:91 http://ftpmaster.internal/ubuntu eoan/main ppc64el libidn11 ppc64el 1.33-2.2ubuntu2 [48.8 kB] Get:92 http://ftpmaster.internal/ubuntu eoan/main ppc64el libkmod2 ppc64el 26-1ubuntu1 [51.8 kB] Get:93 http://ftpmaster.internal/ubuntu eoan/main ppc64el libpam0g ppc64el 1.3.1-5ubuntu1 [62.7 kB] Get:94 http://ftpmaster.internal/ubuntu eoan/main ppc64el libseccomp2 ppc64el 2.4.1-0ubuntu0.19.10.3 [48.6 kB] Get:95 http://ftpmaster.internal/ubuntu eoan/main ppc64el mount ppc64el 2.33.1-0.1ubuntu2 [122 kB] Get:96 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsepol1 ppc64el 2.9-1 [287 kB] Get:97 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsemanage-common all 2.9-1 [9916 B] Get:98 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsemanage1 ppc64el 2.9-1 [97.0 kB] Get:99 http://ftpmaster.internal/ubuntu eoan/main ppc64el libpam-modules-bin ppc64el 1.3.1-5ubuntu1 [43.6 kB] Get:100 http://ftpmaster.internal/ubuntu eoan/main ppc64el libpam-modules ppc64el 1.3.1-5ubuntu1 [287 kB] Get:101 http://ftpmaster.internal/ubuntu eoan/main ppc64el passwd ppc64el 1:4.5-1.1ubuntu2 [828 kB] Get:102 http://ftpmaster.internal/ubuntu eoan/main ppc64el adduser all 3.118ubuntu1 [163 kB] Get:103 http://ftpmaster.internal/ubuntu eoan/main ppc64el systemd ppc64el 240-6ubuntu9 [4034 kB] Get:104 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsystemd0 ppc64el 240-6ubuntu9 [300 kB] Get:105 http://ftpmaster.internal/ubuntu eoan/main ppc64el libzstd1 ppc64el 1.3.8+dfsg-3 [291 kB] Get:106 http://ftpmaster.internal/ubuntu eoan/main ppc64el libapt-pkg5.90 ppc64el 1.9.1 [897 kB] Get:107 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgcrypt20 ppc64el 1.8.4-5ubuntu1 [449 kB] Get:108 http://ftpmaster.internal/ubuntu eoan/main ppc64el gpgv ppc64el 2.2.12-1ubuntu3 [237 kB] Get:109 http://ftpmaster.internal/ubuntu eoan/main ppc64el apt ppc64el 1.9.1 [1313 kB] Get:110 http://ftpmaster.internal/ubuntu eoan/main ppc64el libext2fs2 ppc64el 1.45.2-1ubuntu1 [215 kB] Get:111 http://ftpmaster.internal/ubuntu eoan/main ppc64el e2fsprogs ppc64el 1.45.2-1ubuntu1 [580 kB] Get:112 http://ftpmaster.internal/ubuntu eoan/main ppc64el init ppc64el 1.57 [6088 B] Get:113 http://ftpmaster.internal/ubuntu eoan/main ppc64el libattr1 ppc64el 1:2.4.48-4 [13.7 kB] Get:114 http://ftpmaster.internal/ubuntu eoan/main ppc64el libpam-runtime all 1.3.1-5ubuntu1 [37.3 kB] Get:115 http://ftpmaster.internal/ubuntu eoan/main ppc64el libpcre3 ppc64el 2:8.39-12 [239 kB] Get:116 http://ftpmaster.internal/ubuntu eoan/main ppc64el libisl21 ppc64el 0.21-1 [683 kB] Get:117 http://ftpmaster.internal/ubuntu eoan/main ppc64el libmpfr6 ppc64el 4.0.2-1 [263 kB] Get:118 http://ftpmaster.internal/ubuntu eoan/main ppc64el libcom-err2 ppc64el 1.45.2-1ubuntu1 [10.5 kB] Get:119 http://ftpmaster.internal/ubuntu eoan/main ppc64el libprocps7 ppc64el 2:3.3.15-2ubuntu2 [37.0 kB] Get:120 http://ftpmaster.internal/ubuntu eoan/main ppc64el libss2 ppc64el 1.45.2-1ubuntu1 [12.5 kB] Get:121 http://ftpmaster.internal/ubuntu eoan/main ppc64el procps ppc64el 2:3.3.15-2ubuntu2 [253 kB] Get:122 http://ftpmaster.internal/ubuntu eoan/main ppc64el openssl ppc64el 1.1.1c-1ubuntu3 [626 kB] Get:123 http://ftpmaster.internal/ubuntu eoan/main ppc64el ca-certificates all 20190110 [146 kB] Get:124 http://ftpmaster.internal/ubuntu eoan/main ppc64el dmsetup ppc64el 2:1.02.155-2ubuntu4 [84.6 kB] Get:125 http://ftpmaster.internal/ubuntu eoan/main ppc64el readline-common all 8.0-1 [53.4 kB] Get:126 http://ftpmaster.internal/ubuntu eoan/main ppc64el libreadline8 ppc64el 8.0-1 [144 kB] Get:127 http://ftpmaster.internal/ubuntu eoan/main ppc64el libslang2 ppc64el 2.3.2-3 [414 kB] Get:128 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsqlite3-0 ppc64el 3.27.2-3 [562 kB] Get:129 http://ftpmaster.internal/ubuntu eoan/main ppc64el tzdata all 2019a-1 [187 kB] Get:130 http://ftpmaster.internal/ubuntu eoan/main ppc64el xz-utils ppc64el 5.2.4-1 [87.9 kB] Get:131 http://ftpmaster.internal/ubuntu eoan/main ppc64el libpng16-16 ppc64el 1.6.37-1~exp4 [209 kB] Get:132 http://ftpmaster.internal/ubuntu eoan/main ppc64el multiarch-support ppc64el 2.29-0ubuntu2 [6916 B] Get:133 http://ftpmaster.internal/ubuntu eoan/main ppc64el advancecomp ppc64el 2.1-2.1 [248 kB] Get:134 http://ftpmaster.internal/ubuntu eoan/main ppc64el g++ ppc64el 4:8.3.0-1ubuntu3 [1596 B] Get:135 http://ftpmaster.internal/ubuntu 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Setting up libstdc++-8-dev:ppc64el (8.3.0-14ubuntu1) ... Setting up gpg-agent (2.2.12-1ubuntu3) ... Setting up pkgbinarymangler (144) ... Setting up binutils (2.32.51.20190614-0ubuntu1) ... Setting up perl (5.28.1-6) ... Setting up libdpkg-perl (1.19.6ubuntu1) ... Setting up gcc-8 (8.3.0-14ubuntu1) ... Setting up gcc (4:8.3.0-1ubuntu3) ... Setting up dpkg-dev (1.19.6ubuntu1) ... Setting up g++-8 (8.3.0-14ubuntu1) ... Setting up g++ (4:8.3.0-1ubuntu3) ... Setting up build-essential (12.6ubuntu1) ... Processing triggers for systemd (240-6ubuntu9) ... Processing triggers for libc-bin (2.29-0ubuntu2) ... Processing triggers for ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-16969094 ppc64el eoan -c chroot:build-PACKAGEBUILD-16969094 --arch=ppc64el --dist=eoan --nolog fsl_5.0.8-6.dsc Initiating build PACKAGEBUILD-16969094 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-154-generic #181-Ubuntu SMP Tue Jun 25 05:29:49 UTC 2019 ppc64le sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-ppc64el-009.buildd +==============================================================================+ | fsl 5.0.8-6 (ppc64el) 29 Jun 2019 05:46 | +==============================================================================+ Package: fsl Version: 5.0.8-6 Source Version: 5.0.8-6 Distribution: eoan Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el I: NOTICE: Log filtering will replace 'build/fsl-Sni88j/fsl-5.0.8' with '<>' I: NOTICE: Log filtering will replace 'build/fsl-Sni88j' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-16969094/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- fsl_5.0.8-6.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-1ngOI2/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-1ngOI2/apt_archive ./ InRelease Get:2 copy:/<>/resolver-1ngOI2/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-1ngOI2/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-1ngOI2/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-1ngOI2/apt_archive ./ Packages [529 B] Fetched 2862 B in 0s (237 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libapt-pkg5.0 libisl19 libreadline7 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-1ngOI2/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12814 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 9), zlib1g-dev, libboost-dev, libpng-dev, libgd-dev, libnewmat10-dev, libgdchart-gd2-noxpm-dev | libgdchart-gd2-xpm-dev, liboctave-dev | octave3.2-headers | octave3.0-headers, tcl, imagemagick, libnifti-dev, libgiftiio-dev, mesa-common-dev, libexpat1-dev | libexpat-dev, libglu1-mesa-dev | libglu-dev, libgomp1 Filtered Build-Depends: debhelper (>= 9), zlib1g-dev, libboost-dev, libpng-dev, libgd-dev, libnewmat10-dev, libgdchart-gd2-noxpm-dev | libgdchart-gd2-xpm-dev, liboctave-dev | octave3.2-headers | octave3.0-headers, tcl, imagemagick, libnifti-dev, libgiftiio-dev, mesa-common-dev, libexpat1-dev | libexpat-dev, libglu1-mesa-dev | libglu-dev, libgomp1 dpkg-deb: building package 'sbuild-build-depends-fsl-dummy' in '/<>/resolver-tBI6U6/apt_archive/sbuild-build-depends-fsl-dummy.deb'. Ign:1 copy:/<>/resolver-tBI6U6/apt_archive ./ InRelease Get:2 copy:/<>/resolver-tBI6U6/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-tBI6U6/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-tBI6U6/apt_archive ./ Sources [333 B] Get:5 copy:/<>/resolver-tBI6U6/apt_archive ./ Packages [659 B] Fetched 3111 B in 0s (243 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install fsl build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libapt-pkg5.0 libisl19 libreadline7 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-8 groff-base hdf5-helpers hicolor-icon-theme imagemagick imagemagick-6-common imagemagick-6.q16 intltool-debian libaec-dev libaec0 libamd2 libarchive-zip-perl libarpack2 libasn1-8-heimdal libasound2 libasound2-data libavahi-client3 libavahi-common-data libavahi-common3 libblas-dev libblas3 libboost-dev libboost1.67-dev libbsd0 libcamd2 libccolamd2 libcholmod3 libcolamd2 libcroco3 libcups2 libcurl3-gnutls libcxsparse3 libdbus-1-3 libdouble-conversion1 libdrm-amdgpu1 libdrm-common libdrm-dev libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl-mesa0 libegl1 libelf1 libevdev2 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-single3 libfile-stripnondeterminism-perl libflac8 libfltk-gl1.3 libfltk1.3 libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libgbm1 libgd-dev libgd3 libgdchart-gd2-noxpm libgdchart-gd2-noxpm-dev libgfortran-8-dev libgfortran5 libgiftiio-dev libgiftiio0 libgl1 libgl1-mesa-dev libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libgles1 libgles2 libglib2.0-0 libglpk40 libglu1-mesa libglu1-mesa-dev libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0 libglx0 libgraphicsmagick++-q16-12 libgraphicsmagick-q16-3 libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libgudev-1.0-0 libharfbuzz0b libhcrypto4-heimdal libhdf5-103 libhdf5-cpp-103 libhdf5-dev libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice-dev libice6 libicu63 libinput-bin libinput10 libjack-jackd2-0 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2 libldap-common libllvm8 liblqr-1-0 libltdl7 liblzma-dev libmagic-mgc libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmetis5 libmtdev1 libncurses-dev libnewmat10-dev libnewmat10ldbl libnghttp2-14 libnifti-dev libnifti2 liboctave-dev liboctave6 libogg0 libopengl0 libpcre2-16-0 libpipeline1 libpng-dev libportaudio2 libpsl5 libpthread-stubs0-dev libqhull7 libqrupdate1 libqscintilla2-qt5-13 libqscintilla2-qt5-l10n libqt5core5a libqt5dbus5 libqt5gui5 libqt5help5 libqt5network5 libqt5printsupport5 libqt5sql5 libqt5widgets5 libreadline-dev libroken18-heimdal librtmp1 libsamplerate0 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigsegv2 libsm-dev libsm6 libsndfile1 libssh-4 libsuitesparseconfig5 libsz2 libtcl8.6 libtext-unidecode-perl libtiff-dev libtiff5 libtiffxx5 libtool libuchardet0 libumfpack5 libvorbis0a libvorbisenc2 libvpx-dev libvpx5 libwacom-common libwacom2 libwayland-client0 libwayland-server0 libwebp6 libwebpmux3 libwind0-heimdal libwmf0.2-7 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render-util0 libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxcursor1 libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft2 libxinerama1 libxkbcommon-x11-0 libxkbcommon0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml2 libxpm-dev libxpm4 libxrender1 libxshmfence-dev libxshmfence1 libxt-dev libxt6 libxxf86vm-dev libxxf86vm1 m4 man-db mesa-common-dev octave octave-common pkg-config po-debconf tcl tcl8.6 tex-common texinfo ucf uuid-dev x11-common x11proto-core-dev x11proto-damage-dev x11proto-dev x11proto-fixes-dev x11proto-xext-dev x11proto-xf86vidmode-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc gfortran-8-doc libgfortran5-dbg libcoarrays-dev groff imagemagick-doc autotrace cups-bsd | lpr | lprng curl enscript ffmpeg gimp gnuplot grads graphviz hp2xx html2ps libwmf-bin mplayer povray radiance sane-utils texlive-base-bin transfig ufraw-batch xdg-utils libasound2-plugins alsa-utils liblapack-doc libboost-doc libboost1.67-doc libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev libboost-context1.67-dev libboost-contract1.67-dev libboost-coroutine1.67-dev libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev libboost-filesystem1.67-dev libboost-graph1.67-dev libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev libboost-program-options1.67-dev libboost-python1.67-dev libboost-random1.67-dev libboost-regex1.67-dev libboost-serialization1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev cups-common libfftw3-doc libgd-tools libiodbc2-dev default-libmysqlclient-dev graphicsmagick-dbg krb5-doc krb5-user libhdf5-doc libice-doc jackd2 liblcms2-utils liblzma-doc libmagickcore-6.q16-6-extra ncurses-doc libqscintilla2-doc libthai0 qt5-image-formats-plugins qtwayland5 readline-doc lm-sensors libsm-doc libtool-doc gcj-jdk libwmf0.2-7-gtk libx11-doc libxcb-doc libxext-doc libxt-doc m4-doc apparmor less www-browser libmail-box-perl tcl-tclreadline texlive-base texlive-latex-base texlive-generic-recommended texinfo-doc-nonfree texlive-fonts-recommended Recommended packages: curl | wget | lynx libmagickcore-6.q16-6-extra ghostscript netpbm dbus libarchive-cpio-perl freetype2-doc libglib2.0-data shared-mime-info xdg-user-dirs gsfonts krb5-locales libpng-tools publicsuffix qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme libqt5sql5-sqlite | libqt5sql5-mysql | libqt5sql5-odbc | libqt5sql5-psql | libqt5sql5-tds | libqt5sql5-ibase libsasl2-modules libltdl-dev libwacom-bin libwww-perl libxml-sax-expat-perl gnuplot-qt | gnuplot-x11 | gnuplot-nox libopenblas-base | libatlas3-base pstoedit epstool default-jre-headless octave-doc fonts-freefont-otf libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-8 groff-base hdf5-helpers hicolor-icon-theme imagemagick imagemagick-6-common imagemagick-6.q16 intltool-debian libaec-dev libaec0 libamd2 libarchive-zip-perl libarpack2 libasn1-8-heimdal libasound2 libasound2-data libavahi-client3 libavahi-common-data libavahi-common3 libblas-dev libblas3 libboost-dev libboost1.67-dev libbsd0 libcamd2 libccolamd2 libcholmod3 libcolamd2 libcroco3 libcups2 libcurl3-gnutls libcxsparse3 libdbus-1-3 libdouble-conversion1 libdrm-amdgpu1 libdrm-common libdrm-dev libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl-mesa0 libegl1 libelf1 libevdev2 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-single3 libfile-stripnondeterminism-perl libflac8 libfltk-gl1.3 libfltk1.3 libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libgbm1 libgd-dev libgd3 libgdchart-gd2-noxpm libgdchart-gd2-noxpm-dev libgfortran-8-dev libgfortran5 libgiftiio-dev libgiftiio0 libgl1 libgl1-mesa-dev libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libgles1 libgles2 libglib2.0-0 libglpk40 libglu1-mesa libglu1-mesa-dev libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0 libglx0 libgraphicsmagick++-q16-12 libgraphicsmagick-q16-3 libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libgudev-1.0-0 libharfbuzz0b libhcrypto4-heimdal libhdf5-103 libhdf5-cpp-103 libhdf5-dev libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice-dev libice6 libicu63 libinput-bin libinput10 libjack-jackd2-0 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2 libldap-common libllvm8 liblqr-1-0 libltdl7 liblzma-dev libmagic-mgc libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmetis5 libmtdev1 libncurses-dev libnewmat10-dev libnewmat10ldbl libnghttp2-14 libnifti-dev libnifti2 liboctave-dev liboctave6 libogg0 libopengl0 libpcre2-16-0 libpipeline1 libpng-dev libportaudio2 libpsl5 libpthread-stubs0-dev libqhull7 libqrupdate1 libqscintilla2-qt5-13 libqscintilla2-qt5-l10n libqt5core5a libqt5dbus5 libqt5gui5 libqt5help5 libqt5network5 libqt5printsupport5 libqt5sql5 libqt5widgets5 libreadline-dev libroken18-heimdal librtmp1 libsamplerate0 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigsegv2 libsm-dev libsm6 libsndfile1 libssh-4 libsuitesparseconfig5 libsz2 libtcl8.6 libtext-unidecode-perl libtiff-dev libtiff5 libtiffxx5 libtool libuchardet0 libumfpack5 libvorbis0a libvorbisenc2 libvpx-dev libvpx5 libwacom-common libwacom2 libwayland-client0 libwayland-server0 libwebp6 libwebpmux3 libwind0-heimdal libwmf0.2-7 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render-util0 libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxcursor1 libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft2 libxinerama1 libxkbcommon-x11-0 libxkbcommon0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml2 libxpm-dev libxpm4 libxrender1 libxshmfence-dev libxshmfence1 libxt-dev libxt6 libxxf86vm-dev libxxf86vm1 m4 man-db mesa-common-dev octave octave-common pkg-config po-debconf sbuild-build-depends-fsl-dummy tcl tcl8.6 tex-common texinfo ucf uuid-dev x11-common x11proto-core-dev x11proto-damage-dev x11proto-dev x11proto-fixes-dev x11proto-xext-dev x11proto-xf86vidmode-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 299 newly installed, 0 to remove and 0 not upgraded. Need to get 121 MB of archives. After this operation, 782 MB of additional disk space will be used. Get:1 copy:/<>/resolver-tBI6U6/apt_archive ./ sbuild-build-depends-fsl-dummy 0.invalid.0 [984 B] Get:2 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxau6 ppc64el 1:1.0.8-1 [7460 B] Get:3 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libgfortran5 ppc64el 9.1.0-4ubuntu1 [397 kB] Get:4 http://ftpmaster.internal/ubuntu eoan/main ppc64el libbsd0 ppc64el 0.9.1-2 [54.8 kB] Get:5 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxdmcp6 ppc64el 1:1.1.2-3 [11.0 kB] Get:6 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb1 ppc64el 1.13.1-2 [51.1 kB] Get:7 http://ftpmaster.internal/ubuntu eoan/main ppc64el libx11-data all 2:1.6.7-1 [113 kB] Get:8 http://ftpmaster.internal/ubuntu eoan/main ppc64el libx11-6 ppc64el 2:1.6.7-1 [641 kB] Get:9 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el libgfortran-8-dev ppc64el 8.3.0-14ubuntu1 [431 kB] Get:10 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxext6 ppc64el 2:1.3.3-1 [30.7 kB] Get:11 http://ftpmaster.internal/ubuntu eoan/main ppc64el bsdmainutils ppc64el 11.1.2ubuntu2 [185 kB] Get:12 http://ppa.launchpad.net/ubuntu-toolchain-r/ppa/ubuntu eoan/main ppc64el gfortran-8 ppc64el 8.3.0-14ubuntu1 [9871 kB] Get:13 http://ftpmaster.internal/ubuntu eoan/main ppc64el libuchardet0 ppc64el 0.0.6-3 [67.7 kB] Get:14 http://ftpmaster.internal/ubuntu eoan/main ppc64el groff-base ppc64el 1.22.4-3 [936 kB] Get:15 http://ftpmaster.internal/ubuntu eoan/main ppc64el libpipeline1 ppc64el 1.5.1-2 [27.7 kB] Get:16 http://ftpmaster.internal/ubuntu eoan/main ppc64el man-db ppc64el 2.8.5-2 [1140 kB] Get:17 http://ftpmaster.internal/ubuntu eoan/main ppc64el libfftw3-double3 ppc64el 3.3.8-2 [427 kB] Get:18 http://ftpmaster.internal/ubuntu eoan/main ppc64el libexpat1 ppc64el 2.2.6-2 [87.8 kB] Get:19 http://ftpmaster.internal/ubuntu eoan/main ppc64el libfreetype6 ppc64el 2.9.1-3 [416 kB] Get:20 http://ftpmaster.internal/ubuntu eoan/main ppc64el ucf all 3.0038+nmu1 [51.6 kB] Get:21 http://ftpmaster.internal/ubuntu eoan/main ppc64el fonts-dejavu-core all 2.37-1 [1041 kB] Get:22 http://ftpmaster.internal/ubuntu eoan/main ppc64el fontconfig-config all 2.13.1-2ubuntu2 [28.9 kB] Get:23 http://ftpmaster.internal/ubuntu eoan/main ppc64el libfontconfig1 ppc64el 2.13.1-2ubuntu2 [155 kB] Get:24 http://ftpmaster.internal/ubuntu eoan/main ppc64el libjbig0 ppc64el 2.1-3.1build1 [26.9 kB] Get:25 http://ftpmaster.internal/ubuntu eoan/main ppc64el libjpeg-turbo8 ppc64el 2.0.1-0ubuntu2 [158 kB] Get:26 http://ftpmaster.internal/ubuntu eoan/main ppc64el libjpeg8 ppc64el 8c-2ubuntu8 [2146 B] Get:27 http://ftpmaster.internal/ubuntu eoan/main ppc64el liblcms2-2 ppc64el 2.9-3 [193 kB] Get:28 http://ftpmaster.internal/ubuntu eoan/main ppc64el libglib2.0-0 ppc64el 2.60.4-1 [1357 kB] Get:29 http://ftpmaster.internal/ubuntu eoan/main ppc64el liblqr-1-0 ppc64el 0.4.2-2.1 [37.5 kB] Get:30 http://ftpmaster.internal/ubuntu eoan/main ppc64el libltdl7 ppc64el 2.4.6-10 [44.7 kB] Get:31 http://ftpmaster.internal/ubuntu eoan/main ppc64el libwebp6 ppc64el 0.6.1-2 [225 kB] Get:32 http://ftpmaster.internal/ubuntu eoan/main ppc64el libtiff5 ppc64el 4.0.10-4 [196 kB] Get:33 http://ftpmaster.internal/ubuntu eoan/main ppc64el libwebpmux3 ppc64el 0.6.1-2 [21.0 kB] Get:34 http://ftpmaster.internal/ubuntu eoan/main ppc64el libicu63 ppc64el 63.2-2 [8505 kB] Get:35 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxml2 ppc64el 2.9.4+dfsg1-7ubuntu3 [666 kB] Get:36 http://ftpmaster.internal/ubuntu eoan/main ppc64el imagemagick-6-common all 8:6.9.10.23+dfsg-2.1ubuntu3 [61.1 kB] Get:37 http://ftpmaster.internal/ubuntu eoan/main ppc64el libmagickcore-6.q16-6 ppc64el 8:6.9.10.23+dfsg-2.1ubuntu3 [1809 kB] Get:38 http://ftpmaster.internal/ubuntu eoan/main ppc64el libmagickwand-6.q16-6 ppc64el 8:6.9.10.23+dfsg-2.1ubuntu3 [258 kB] Get:39 http://ftpmaster.internal/ubuntu eoan/main ppc64el libogg0 ppc64el 1.3.2-1 [17.1 kB] Get:40 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxxf86vm1 ppc64el 1:1.1.4-1 [10.7 kB] Get:41 http://ftpmaster.internal/ubuntu eoan/main ppc64el tex-common all 6.11 [32.7 kB] Get:42 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-keysyms1 ppc64el 0.4.0-1 [8308 B] Get:43 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-render0 ppc64el 1.13.1-2 [15.6 kB] Get:44 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-render-util0 ppc64el 0.3.9-1 [9720 B] Get:45 http://ftpmaster.internal/ubuntu eoan/main ppc64el libmagic-mgc ppc64el 1:5.35-4 [200 kB] Get:46 http://ftpmaster.internal/ubuntu eoan/main ppc64el libmagic1 ppc64el 1:5.35-4 [91.2 kB] Get:47 http://ftpmaster.internal/ubuntu eoan/main ppc64el file ppc64el 1:5.35-4 [24.2 kB] Get:48 http://ftpmaster.internal/ubuntu eoan/main ppc64el libdbus-1-3 ppc64el 1.12.14-1ubuntu2 [199 kB] Get:49 http://ftpmaster.internal/ubuntu eoan/main ppc64el libelf1 ppc64el 0.176-1.1 [51.6 kB] Get:50 http://ftpmaster.internal/ubuntu eoan/main ppc64el xkb-data all 2.26-2ubuntu1 [333 kB] Get:51 http://ftpmaster.internal/ubuntu eoan/main ppc64el gettext-base ppc64el 0.19.8.1-9 [52.8 kB] Get:52 http://ftpmaster.internal/ubuntu eoan/main ppc64el libdrm-common all 2.4.97-1ubuntu1 [5184 B] Get:53 http://ftpmaster.internal/ubuntu eoan/main ppc64el libdrm2 ppc64el 2.4.97-1ubuntu1 [37.6 kB] Get:54 http://ftpmaster.internal/ubuntu eoan/main ppc64el libedit2 ppc64el 3.1-20190324-1~exp1 [108 kB] Get:55 http://ftpmaster.internal/ubuntu eoan/main ppc64el libkrb5support0 ppc64el 1.17-3 [37.0 kB] Get:56 http://ftpmaster.internal/ubuntu eoan/main ppc64el libk5crypto3 ppc64el 1.17-3 [110 kB] Get:57 http://ftpmaster.internal/ubuntu eoan/main ppc64el libkeyutils1 ppc64el 1.6-6 [11.3 kB] Get:58 http://ftpmaster.internal/ubuntu eoan/main ppc64el libkrb5-3 ppc64el 1.17-3 [380 kB] Get:59 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgssapi-krb5-2 ppc64el 1.17-3 [136 kB] Get:60 http://ftpmaster.internal/ubuntu eoan/main ppc64el libpsl5 ppc64el 0.20.2-2 [52.2 kB] Get:61 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsigsegv2 ppc64el 2.12-2 [13.9 kB] Get:62 http://ftpmaster.internal/ubuntu eoan/main ppc64el m4 ppc64el 1.4.18-2 [203 kB] Get:63 http://ftpmaster.internal/ubuntu eoan/main ppc64el autoconf all 2.69-11 [322 kB] Get:64 http://ftpmaster.internal/ubuntu eoan/main ppc64el autotools-dev all 20180224.1 [39.6 kB] Get:65 http://ftpmaster.internal/ubuntu eoan/main ppc64el automake all 1:1.16.1-4ubuntu3 [522 kB] Get:66 http://ftpmaster.internal/ubuntu eoan/main ppc64el autopoint all 0.19.8.1-9 [412 kB] Get:67 http://ftpmaster.internal/ubuntu eoan/main ppc64el libtool all 2.4.6-10 [194 kB] Get:68 http://ftpmaster.internal/ubuntu eoan/main ppc64el dh-autoreconf all 19 [16.1 kB] Get:69 http://ftpmaster.internal/ubuntu eoan/main ppc64el libarchive-zip-perl all 1.64-1 [84.9 kB] Get:70 http://ftpmaster.internal/ubuntu eoan/main ppc64el libfile-stripnondeterminism-perl all 1.1.2-1 [13.7 kB] Get:71 http://ftpmaster.internal/ubuntu eoan/main ppc64el dh-strip-nondeterminism all 1.1.2-1 [5208 B] Get:72 http://ftpmaster.internal/ubuntu eoan/main ppc64el dwz ppc64el 0.12-3 [87.4 kB] Get:73 http://ftpmaster.internal/ubuntu eoan/main ppc64el libcroco3 ppc64el 0.6.12-3 [92.5 kB] Get:74 http://ftpmaster.internal/ubuntu eoan/main ppc64el gettext ppc64el 0.19.8.1-9 [978 kB] Get:75 http://ftpmaster.internal/ubuntu eoan/main ppc64el intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:76 http://ftpmaster.internal/ubuntu eoan/main ppc64el po-debconf all 1.0.21 [233 kB] Get:77 http://ftpmaster.internal/ubuntu eoan/main ppc64el debhelper all 12.1.1ubuntu1 [899 kB] Get:78 http://ftpmaster.internal/ubuntu eoan/main ppc64el fontconfig ppc64el 2.13.1-2ubuntu2 [173 kB] Get:79 http://ftpmaster.internal/ubuntu eoan/main ppc64el gfortran ppc64el 4:8.3.0-1ubuntu3 [1360 B] Get:80 http://ftpmaster.internal/ubuntu eoan/universe ppc64el hdf5-helpers ppc64el 1.10.4+repack-10 [13.9 kB] Get:81 http://ftpmaster.internal/ubuntu eoan/main ppc64el hicolor-icon-theme all 0.17-2 [9976 B] Get:82 http://ftpmaster.internal/ubuntu eoan/universe ppc64el imagemagick-6.q16 ppc64el 8:6.9.10.23+dfsg-2.1ubuntu3 [427 kB] Get:83 http://ftpmaster.internal/ubuntu eoan/universe ppc64el imagemagick ppc64el 8:6.9.10.23+dfsg-2.1ubuntu3 [14.4 kB] Get:84 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libaec0 ppc64el 1.0.2-1 [23.1 kB] Get:85 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsuitesparseconfig5 ppc64el 1:5.4.0+dfsg-1 [9412 B] Get:86 http://ftpmaster.internal/ubuntu eoan/main ppc64el libamd2 ppc64el 1:5.4.0+dfsg-1 [23.1 kB] Get:87 http://ftpmaster.internal/ubuntu eoan/main ppc64el libblas3 ppc64el 3.8.0-2 [101 kB] Get:88 http://ftpmaster.internal/ubuntu eoan/main ppc64el liblapack3 ppc64el 3.8.0-2 [1625 kB] Get:89 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libarpack2 ppc64el 3.7.0-2 [90.5 kB] Get:90 http://ftpmaster.internal/ubuntu eoan/main ppc64el libroken18-heimdal ppc64el 7.5.0+dfsg-3 [47.0 kB] Get:91 http://ftpmaster.internal/ubuntu eoan/main ppc64el libasn1-8-heimdal ppc64el 7.5.0+dfsg-3 [176 kB] Get:92 http://ftpmaster.internal/ubuntu eoan/main ppc64el libasound2-data all 1.1.8-1 [41.5 kB] Get:93 http://ftpmaster.internal/ubuntu eoan/main ppc64el libasound2 ppc64el 1.1.8-1 [404 kB] Get:94 http://ftpmaster.internal/ubuntu eoan/main ppc64el libavahi-common-data ppc64el 0.7-4ubuntu5 [21.4 kB] Get:95 http://ftpmaster.internal/ubuntu eoan/main ppc64el libavahi-common3 ppc64el 0.7-4ubuntu5 [23.6 kB] Get:96 http://ftpmaster.internal/ubuntu eoan/main ppc64el libavahi-client3 ppc64el 0.7-4ubuntu5 [28.6 kB] Get:97 http://ftpmaster.internal/ubuntu eoan/main ppc64el libblas-dev ppc64el 3.8.0-2 [104 kB] Get:98 http://ftpmaster.internal/ubuntu eoan/main ppc64el libboost1.67-dev ppc64el 1.67.0-13ubuntu1 [8361 kB] Get:99 http://ftpmaster.internal/ubuntu eoan/main ppc64el libboost-dev ppc64el 1.67.0.1 [3232 B] Get:100 http://ftpmaster.internal/ubuntu eoan/main ppc64el libcamd2 ppc64el 1:5.4.0+dfsg-1 [25.9 kB] Get:101 http://ftpmaster.internal/ubuntu eoan/main ppc64el libccolamd2 ppc64el 1:5.4.0+dfsg-1 [26.6 kB] Get:102 http://ftpmaster.internal/ubuntu eoan/main ppc64el libcolamd2 ppc64el 1:5.4.0+dfsg-1 [18.0 kB] Get:103 http://ftpmaster.internal/ubuntu eoan/main ppc64el libmetis5 ppc64el 5.1.0.dfsg-5 [156 kB] Get:104 http://ftpmaster.internal/ubuntu eoan/main ppc64el libcholmod3 ppc64el 1:5.4.0+dfsg-1 [391 kB] Get:105 http://ftpmaster.internal/ubuntu eoan/main ppc64el libcups2 ppc64el 2.2.10-6ubuntu1 [254 kB] Get:106 http://ftpmaster.internal/ubuntu eoan/main ppc64el libheimbase1-heimdal ppc64el 7.5.0+dfsg-3 [33.9 kB] Get:107 http://ftpmaster.internal/ubuntu eoan/main ppc64el libhcrypto4-heimdal ppc64el 7.5.0+dfsg-3 [107 kB] Get:108 http://ftpmaster.internal/ubuntu eoan/main ppc64el libwind0-heimdal ppc64el 7.5.0+dfsg-3 [48.7 kB] Get:109 http://ftpmaster.internal/ubuntu eoan/main ppc64el libhx509-5-heimdal ppc64el 7.5.0+dfsg-3 [121 kB] Get:110 http://ftpmaster.internal/ubuntu eoan/main ppc64el libkrb5-26-heimdal ppc64el 7.5.0+dfsg-3 [237 kB] Get:111 http://ftpmaster.internal/ubuntu eoan/main ppc64el libheimntlm0-heimdal ppc64el 7.5.0+dfsg-3 [17.0 kB] Get:112 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgssapi3-heimdal ppc64el 7.5.0+dfsg-3 [106 kB] Get:113 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsasl2-modules-db ppc64el 2.1.27+dfsg-1 [17.0 kB] Get:114 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsasl2-2 ppc64el 2.1.27+dfsg-1 [62.0 kB] Get:115 http://ftpmaster.internal/ubuntu eoan/main ppc64el libldap-common all 2.4.47+dfsg-3ubuntu2 [16.6 kB] Get:116 http://ftpmaster.internal/ubuntu eoan/main ppc64el libldap-2.4-2 ppc64el 2.4.47+dfsg-3ubuntu2 [179 kB] Get:117 http://ftpmaster.internal/ubuntu eoan/main ppc64el libnghttp2-14 ppc64el 1.37.0-1 [92.9 kB] Get:118 http://ftpmaster.internal/ubuntu eoan/main ppc64el librtmp1 ppc64el 2.4+20151223.gitfa8646d.1-2 [54.5 kB] Get:119 http://ftpmaster.internal/ubuntu eoan/main ppc64el libssh-4 ppc64el 0.8.7-1 [220 kB] Get:120 http://ftpmaster.internal/ubuntu eoan/main ppc64el libcurl3-gnutls ppc64el 7.64.0-4ubuntu1 [258 kB] Get:121 http://ftpmaster.internal/ubuntu eoan/main ppc64el libcxsparse3 ppc64el 1:5.4.0+dfsg-1 [80.5 kB] Get:122 http://ftpmaster.internal/ubuntu eoan/main ppc64el libdrm-amdgpu1 ppc64el 2.4.97-1ubuntu1 [21.2 kB] Get:123 http://ftpmaster.internal/ubuntu eoan/main ppc64el libdrm-radeon1 ppc64el 2.4.97-1ubuntu1 [26.2 kB] Get:124 http://ftpmaster.internal/ubuntu eoan/main ppc64el libdrm-nouveau2 ppc64el 2.4.97-1ubuntu1 [19.2 kB] Get:125 http://ftpmaster.internal/ubuntu eoan/main ppc64el libdrm-dev ppc64el 2.4.97-1ubuntu1 [118 kB] Get:126 http://ftpmaster.internal/ubuntu eoan/main ppc64el libwayland-server0 ppc64el 1.16.0-1ubuntu2 [34.5 kB] Get:127 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgbm1 ppc64el 19.0.8-0ubuntu1 [31.5 kB] Get:128 http://ftpmaster.internal/ubuntu eoan/main ppc64el libglapi-mesa ppc64el 19.0.8-0ubuntu1 [26.1 kB] Get:129 http://ftpmaster.internal/ubuntu eoan/main ppc64el libwayland-client0 ppc64el 1.16.0-1ubuntu2 [27.6 kB] Get:130 http://ftpmaster.internal/ubuntu eoan/main ppc64el libx11-xcb1 ppc64el 2:1.6.7-1 [9436 B] Get:131 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-dri2-0 ppc64el 1.13.1-2 [7288 B] Get:132 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-dri3-0 ppc64el 1.13.1-2 [6956 B] Get:133 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-present0 ppc64el 1.13.1-2 [5828 B] Get:134 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-sync1 ppc64el 1.13.1-2 [9340 B] Get:135 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-xfixes0 ppc64el 1.13.1-2 [9656 B] Get:136 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxshmfence1 ppc64el 1.3-1 [5096 B] Get:137 http://ftpmaster.internal/ubuntu eoan/main ppc64el libegl-mesa0 ppc64el 19.0.8-0ubuntu1 [113 kB] Get:138 http://ftpmaster.internal/ubuntu eoan/main ppc64el libexpat1-dev ppc64el 2.2.6-2 [133 kB] Get:139 http://ftpmaster.internal/ubuntu eoan/main ppc64el libfftw3-long3 ppc64el 3.3.8-2 [604 kB] Get:140 http://ftpmaster.internal/ubuntu eoan/main ppc64el libfftw3-single3 ppc64el 3.3.8-2 [428 kB] Get:141 http://ftpmaster.internal/ubuntu eoan/main ppc64el libfftw3-bin ppc64el 3.3.8-2 [31.5 kB] Get:142 http://ftpmaster.internal/ubuntu eoan/main ppc64el libfftw3-dev ppc64el 3.3.8-2 [1286 kB] Get:143 http://ftpmaster.internal/ubuntu eoan/main ppc64el libflac8 ppc64el 1.3.2-3 [201 kB] Get:144 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxfixes3 ppc64el 1:5.0.3-1 [10.6 kB] Get:145 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxrender1 ppc64el 1:0.9.10-1 [17.6 kB] Get:146 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcursor1 ppc64el 1:1.2.0-1 [24.7 kB] Get:147 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxft2 ppc64el 2.3.2-2 [45.1 kB] Get:148 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxinerama1 ppc64el 2:1.1.4-2 [7356 B] Get:149 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libfltk1.3 ppc64el 1.3.4-9ubuntu1 [594 kB] Get:150 http://ftpmaster.internal/ubuntu eoan/main ppc64el libglvnd0 ppc64el 1.1.1-0ubuntu1 [49.9 kB] Get:151 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-glx0 ppc64el 1.13.1-2 [23.3 kB] Get:152 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxdamage1 ppc64el 1:1.1.4-3 [7056 B] Get:153 http://ftpmaster.internal/ubuntu eoan/main ppc64el libllvm8 ppc64el 1:8.0.1~+rc1-1~exp1 [13.0 MB] Get:154 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsensors-config all 1:3.5.0-3ubuntu1 [6168 B] Get:155 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsensors5 ppc64el 1:3.5.0-3ubuntu1 [32.9 kB] Get:156 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgl1-mesa-dri ppc64el 19.0.8-0ubuntu1 [6802 kB] Get:157 http://ftpmaster.internal/ubuntu eoan/main ppc64el libglx-mesa0 ppc64el 19.0.8-0ubuntu1 [158 kB] Get:158 http://ftpmaster.internal/ubuntu eoan/main ppc64el libglx0 ppc64el 1.1.1-0ubuntu1 [33.3 kB] Get:159 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgl1 ppc64el 1.1.1-0ubuntu1 [95.2 kB] Get:160 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libfltk-gl1.3 ppc64el 1.3.4-9ubuntu1 [40.2 kB] Get:161 http://ftpmaster.internal/ubuntu eoan/main ppc64el zlib1g-dev ppc64el 1:1.2.11.dfsg-1ubuntu2 [176 kB] Get:162 http://ftpmaster.internal/ubuntu eoan/main ppc64el libpng-dev ppc64el 1.6.37-1~exp4 [215 kB] Get:163 http://ftpmaster.internal/ubuntu eoan/main ppc64el libfreetype6-dev ppc64el 2.9.1-3 [585 kB] Get:164 http://ftpmaster.internal/ubuntu eoan/main ppc64el uuid-dev ppc64el 2.33.1-0.1ubuntu2 [36.1 kB] Get:165 http://ftpmaster.internal/ubuntu eoan/main ppc64el pkg-config ppc64el 0.29.1-0ubuntu3 [49.3 kB] Get:166 http://ftpmaster.internal/ubuntu eoan/main ppc64el libfontconfig1-dev ppc64el 2.13.1-2ubuntu2 [777 kB] Get:167 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxpm4 ppc64el 1:3.5.12-1 [35.9 kB] Get:168 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgd3 ppc64el 2.2.5-5.2 [144 kB] Get:169 http://ftpmaster.internal/ubuntu eoan/main ppc64el libjpeg-turbo8-dev ppc64el 2.0.1-0ubuntu2 [280 kB] Get:170 http://ftpmaster.internal/ubuntu eoan/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu8 [1606 B] Get:171 http://ftpmaster.internal/ubuntu eoan/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu8 [1602 B] Get:172 http://ftpmaster.internal/ubuntu eoan/main ppc64el xorg-sgml-doctools all 1:1.11-1 [12.9 kB] Get:173 http://ftpmaster.internal/ubuntu eoan/main ppc64el x11proto-dev all 2018.4-4 [251 kB] Get:174 http://ftpmaster.internal/ubuntu eoan/main ppc64el x11proto-core-dev all 2018.4-4 [2620 B] Get:175 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxau-dev ppc64el 1:1.0.8-1 [9358 B] Get:176 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxdmcp-dev ppc64el 1:1.1.2-3 [26.1 kB] Get:177 http://ftpmaster.internal/ubuntu eoan/main ppc64el xtrans-dev all 1.3.5-1 [70.5 kB] Get:178 http://ftpmaster.internal/ubuntu eoan/main ppc64el libpthread-stubs0-dev ppc64el 0.4-1 [5388 B] Get:179 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb1-dev ppc64el 1.13.1-2 [88.5 kB] Get:180 http://ftpmaster.internal/ubuntu eoan/main ppc64el libx11-dev ppc64el 2:1.6.7-1 [733 kB] Get:181 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxpm-dev ppc64el 1:3.5.12-1 [89.9 kB] Get:182 http://ftpmaster.internal/ubuntu eoan/main ppc64el x11-common all 1:7.7+19ubuntu12 [22.4 kB] Get:183 http://ftpmaster.internal/ubuntu eoan/main ppc64el libice6 ppc64el 2:1.0.9-2 [38.0 kB] Get:184 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsm6 ppc64el 2:1.2.3-1 [17.6 kB] Get:185 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxt6 ppc64el 1:1.1.5-1 [152 kB] Get:186 http://ftpmaster.internal/ubuntu eoan/main ppc64el libice-dev ppc64el 2:1.0.9-2 [48.6 kB] Get:187 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsm-dev ppc64el 2:1.2.3-1 [19.3 kB] Get:188 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxt-dev ppc64el 1:1.1.5-1 [406 kB] Get:189 http://ftpmaster.internal/ubuntu eoan/main ppc64el libvpx5 ppc64el 1.7.0-3 [644 kB] Get:190 http://ftpmaster.internal/ubuntu eoan/main ppc64el libvpx-dev ppc64el 1.7.0-3 [782 kB] Get:191 http://ftpmaster.internal/ubuntu eoan/main ppc64el libjbig-dev ppc64el 2.1-3.1build1 [25.6 kB] Get:192 http://ftpmaster.internal/ubuntu eoan/main ppc64el liblzma-dev ppc64el 5.2.4-1 [166 kB] Get:193 http://ftpmaster.internal/ubuntu eoan/main ppc64el libtiffxx5 ppc64el 4.0.10-4 [6128 B] Get:194 http://ftpmaster.internal/ubuntu eoan/main ppc64el libtiff-dev ppc64el 4.0.10-4 [330 kB] Get:195 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgd-dev ppc64el 2.2.5-5.2 [280 kB] Get:196 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libgdchart-gd2-noxpm ppc64el 0.11.5-10 [38.5 kB] Get:197 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libgdchart-gd2-noxpm-dev ppc64el 0.11.5-10 [46.7 kB] Get:198 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libnifti2 ppc64el 2.0.0-3 [112 kB] Get:199 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libgiftiio0 ppc64el 1.0.9-3 [64.8 kB] Get:200 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libnifti-dev ppc64el 2.0.0-3 [152 kB] Get:201 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libgiftiio-dev ppc64el 1.0.9-3 [81.7 kB] Get:202 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libgl2ps1.4 ppc64el 1.4.0+dfsg1-2 [42.1 kB] Get:203 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgles1 ppc64el 1.1.1-0ubuntu1 [14.3 kB] Get:204 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libglpk40 ppc64el 4.65-2 [392 kB] Get:205 http://ftpmaster.internal/ubuntu eoan/main ppc64el libglu1-mesa ppc64el 9.0.0-2.1build1 [225 kB] Get:206 http://ftpmaster.internal/ubuntu eoan/main ppc64el mesa-common-dev ppc64el 19.0.8-0ubuntu1 [602 kB] Get:207 http://ftpmaster.internal/ubuntu eoan/main ppc64el libglvnd-core-dev ppc64el 1.1.1-0ubuntu1 [12.6 kB] Get:208 http://ftpmaster.internal/ubuntu eoan/main ppc64el libegl1 ppc64el 1.1.1-0ubuntu1 [41.4 kB] Get:209 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgles2 ppc64el 1.1.1-0ubuntu1 [20.0 kB] Get:210 http://ftpmaster.internal/ubuntu eoan/main ppc64el libopengl0 ppc64el 1.1.1-0ubuntu1 [34.8 kB] Get:211 http://ftpmaster.internal/ubuntu eoan/main ppc64el libglvnd-dev ppc64el 1.1.1-0ubuntu1 [3404 B] Get:212 http://ftpmaster.internal/ubuntu eoan/main ppc64el libx11-xcb-dev ppc64el 2:1.6.7-1 [9776 B] Get:213 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-dri3-dev ppc64el 1.13.1-2 [7788 B] Get:214 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-randr0 ppc64el 1.13.1-2 [17.6 kB] Get:215 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-render0-dev ppc64el 1.13.1-2 [19.3 kB] Get:216 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-randr0-dev ppc64el 1.13.1-2 [22.0 kB] Get:217 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-shape0 ppc64el 1.13.1-2 [6228 B] Get:218 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-shape0-dev ppc64el 1.13.1-2 [7428 B] Get:219 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-xfixes0-dev ppc64el 1.13.1-2 [12.3 kB] Get:220 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-sync-dev ppc64el 1.13.1-2 [11.3 kB] Get:221 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-present-dev ppc64el 1.13.1-2 [7212 B] Get:222 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxshmfence-dev ppc64el 1.3-1 [3704 B] Get:223 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-dri2-0-dev ppc64el 1.13.1-2 [8860 B] Get:224 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-glx0-dev ppc64el 1.13.1-2 [30.0 kB] Get:225 http://ftpmaster.internal/ubuntu eoan/main ppc64el x11proto-fixes-dev all 1:2018.4-4 [2620 B] Get:226 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxfixes-dev ppc64el 1:5.0.3-1 [11.1 kB] Get:227 http://ftpmaster.internal/ubuntu eoan/main ppc64el x11proto-damage-dev all 1:2018.4-4 [2620 B] Get:228 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxdamage-dev ppc64el 1:1.1.4-3 [5984 B] Get:229 http://ftpmaster.internal/ubuntu eoan/main ppc64el x11proto-xext-dev all 2018.4-4 [2620 B] Get:230 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxext-dev ppc64el 2:1.3.3-1 [86.5 kB] Get:231 http://ftpmaster.internal/ubuntu eoan/main ppc64el x11proto-xf86vidmode-dev all 2018.4-4 [2632 B] Get:232 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxxf86vm-dev ppc64el 1:1.1.4-1 [14.0 kB] Get:233 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgl1-mesa-dev ppc64el 19.0.8-0ubuntu1 [6040 B] Get:234 http://ftpmaster.internal/ubuntu eoan/main ppc64el libglu1-mesa-dev ppc64el 9.0.0-2.1build1 [270 kB] Get:235 http://ftpmaster.internal/ubuntu eoan/main ppc64el libwmf0.2-7 ppc64el 0.2.8.4-14 [183 kB] Get:236 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libgraphicsmagick-q16-3 ppc64el 1.4+really1.3.32-1 [1293 kB] Get:237 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libgraphicsmagick++-q16-12 ppc64el 1.4+really1.3.32-1 [106 kB] Get:238 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgraphite2-3 ppc64el 1.3.13-7 [72.5 kB] Get:239 http://ftpmaster.internal/ubuntu eoan/main ppc64el libgudev-1.0-0 ppc64el 1:232-2 [12.3 kB] Get:240 http://ftpmaster.internal/ubuntu eoan/main ppc64el libharfbuzz0b ppc64el 2.4.0-1 [407 kB] Get:241 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libsz2 ppc64el 1.0.2-1 [5284 B] Get:242 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libhdf5-103 ppc64el 1.10.4+repack-10 [1266 kB] Get:243 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libhdf5-cpp-103 ppc64el 1.10.4+repack-10 [115 kB] Get:244 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libaec-dev ppc64el 1.0.2-1 [22.0 kB] Get:245 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libhdf5-dev ppc64el 1.10.4+repack-10 [2822 kB] Get:246 http://ftpmaster.internal/ubuntu eoan/main ppc64el libevdev2 ppc64el 1.6.0+dfsg-1 [31.2 kB] Get:247 http://ftpmaster.internal/ubuntu eoan/main ppc64el libwacom-common all 0.32-1 [38.5 kB] Get:248 http://ftpmaster.internal/ubuntu eoan/main ppc64el libwacom2 ppc64el 0.32-1 [21.3 kB] Get:249 http://ftpmaster.internal/ubuntu eoan/main ppc64el libinput-bin ppc64el 1.12.6-2 [14.3 kB] Get:250 http://ftpmaster.internal/ubuntu eoan/main ppc64el libmtdev1 ppc64el 1.1.5-1ubuntu3 [15.8 kB] Get:251 http://ftpmaster.internal/ubuntu eoan/main ppc64el libinput10 ppc64el 1.12.6-2 [119 kB] Get:252 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsamplerate0 ppc64el 0.1.9-2 [938 kB] Get:253 http://ftpmaster.internal/ubuntu eoan/main ppc64el libjack-jackd2-0 ppc64el 1.9.12~dfsg-2build1 [299 kB] Get:254 http://ftpmaster.internal/ubuntu eoan/main ppc64el liblapack-dev ppc64el 3.8.0-2 [1686 kB] Get:255 http://ftpmaster.internal/ubuntu eoan/main ppc64el libncurses-dev ppc64el 6.1+20181013-2ubuntu2 [415 kB] Get:256 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libnewmat10ldbl ppc64el 1.10.4-8 [159 kB] Get:257 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libnewmat10-dev ppc64el 1.10.4-8 [157 kB] Get:258 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libqrupdate1 ppc64el 1.1.2-3 [38.2 kB] Get:259 http://ftpmaster.internal/ubuntu eoan/main ppc64el libumfpack5 ppc64el 1:5.4.0+dfsg-1 [246 kB] Get:260 http://ftpmaster.internal/ubuntu eoan/universe ppc64el liboctave6 ppc64el 4.4.1-6 [7105 kB] Get:261 http://ftpmaster.internal/ubuntu eoan/main ppc64el libpcre2-16-0 ppc64el 10.32-5 [173 kB] Get:262 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libportaudio2 ppc64el 19.6.0-1 [60.3 kB] Get:263 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libqhull7 ppc64el 2015.2-4 [151 kB] Get:264 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libqscintilla2-qt5-l10n all 2.10.4+dfsg-1build2 [39.9 kB] Get:265 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libdouble-conversion1 ppc64el 3.1.0-3 [43.5 kB] Get:266 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libqt5core5a ppc64el 5.12.2+dfsg-4ubuntu2 [2009 kB] Get:267 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libqt5dbus5 ppc64el 5.12.2+dfsg-4ubuntu2 [214 kB] Get:268 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libqt5network5 ppc64el 5.12.2+dfsg-4ubuntu2 [694 kB] Get:269 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-icccm4 ppc64el 0.4.1-1.1 [11.2 kB] Get:270 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-shm0 ppc64el 1.13.1-2 [5848 B] Get:271 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-util1 ppc64el 0.4.0-0ubuntu3 [11.0 kB] Get:272 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-image0 ppc64el 0.4.0-1build1 [12.4 kB] Get:273 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-xinerama0 ppc64el 1.13.1-2 [5556 B] Get:274 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-xinput0 ppc64el 1.13.1-2 [32.2 kB] Get:275 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxcb-xkb1 ppc64el 1.13.1-2 [31.2 kB] Get:276 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxkbcommon0 ppc64el 0.8.2-1 [126 kB] Get:277 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxkbcommon-x11-0 ppc64el 0.8.2-1 [15.0 kB] Get:278 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libqt5gui5 ppc64el 5.12.2+dfsg-4ubuntu2 [3096 kB] Get:279 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libqt5widgets5 ppc64el 5.12.2+dfsg-4ubuntu2 [2351 kB] Get:280 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libqt5printsupport5 ppc64el 5.12.2+dfsg-4ubuntu2 [200 kB] Get:281 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libqscintilla2-qt5-13 ppc64el 2.10.4+dfsg-1build2 [1039 kB] Get:282 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libqt5sql5 ppc64el 5.12.2+dfsg-4ubuntu2 [125 kB] Get:283 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libqt5help5 ppc64el 5.12.2-1 [137 kB] Get:284 http://ftpmaster.internal/ubuntu eoan/main ppc64el libreadline-dev ppc64el 8.0-1 [181 kB] Get:285 http://ftpmaster.internal/ubuntu eoan/main ppc64el libvorbis0a ppc64el 1.3.6-2 [118 kB] Get:286 http://ftpmaster.internal/ubuntu eoan/main ppc64el libvorbisenc2 ppc64el 1.3.6-2 [76.9 kB] Get:287 http://ftpmaster.internal/ubuntu eoan/main ppc64el libsndfile1 ppc64el 1.0.28-6 [237 kB] Get:288 http://ftpmaster.internal/ubuntu eoan/main ppc64el libtcl8.6 ppc64el 8.6.9+dfsg-2 [1020 kB] Get:289 http://ftpmaster.internal/ubuntu eoan/universe ppc64el libtext-unidecode-perl all 1.30-1 [99.0 kB] Get:290 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxml-namespacesupport-perl all 1.12-1 [13.2 kB] Get:291 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxml-sax-base-perl all 1.09-1 [18.8 kB] Get:292 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxml-sax-perl all 1.00+dfsg-1.1~build1 [56.1 kB] Get:293 http://ftpmaster.internal/ubuntu eoan/main ppc64el libxml-libxml-perl ppc64el 2.0134+dfsg-1 [319 kB] Get:294 http://ftpmaster.internal/ubuntu eoan/main ppc64el tcl8.6 ppc64el 8.6.9+dfsg-2 [14.6 kB] Get:295 http://ftpmaster.internal/ubuntu eoan/universe ppc64el tcl ppc64el 8.6.9+1 [5116 B] Get:296 http://ftpmaster.internal/ubuntu eoan/universe ppc64el texinfo ppc64el 6.5.0.dfsg.1-5 [855 kB] Get:297 http://ftpmaster.internal/ubuntu eoan/universe ppc64el octave-common all 4.4.1-6 [4030 kB] Get:298 http://ftpmaster.internal/ubuntu eoan/universe ppc64el octave ppc64el 4.4.1-6 [1757 kB] Get:299 http://ftpmaster.internal/ubuntu eoan/universe ppc64el liboctave-dev ppc64el 4.4.1-6 [459 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 121 MB in 2s (61.1 MB/s) Selecting previously unselected package libxau6:ppc64el. (Reading database ... 12814 files and directories currently installed.) Preparing to unpack .../000-libxau6_1%3a1.0.8-1_ppc64el.deb ... Unpacking libxau6:ppc64el (1:1.0.8-1) ... Selecting previously unselected package libbsd0:ppc64el. Preparing to unpack .../001-libbsd0_0.9.1-2_ppc64el.deb ... Unpacking libbsd0:ppc64el (0.9.1-2) ... Selecting previously unselected package libxdmcp6:ppc64el. Preparing to unpack .../002-libxdmcp6_1%3a1.1.2-3_ppc64el.deb ... Unpacking libxdmcp6:ppc64el (1:1.1.2-3) ... Selecting previously unselected package libxcb1:ppc64el. Preparing to unpack .../003-libxcb1_1.13.1-2_ppc64el.deb ... Unpacking libxcb1:ppc64el (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../004-libx11-data_2%3a1.6.7-1_all.deb ... Unpacking libx11-data (2:1.6.7-1) ... Selecting previously unselected package libx11-6:ppc64el. Preparing to unpack .../005-libx11-6_2%3a1.6.7-1_ppc64el.deb ... Unpacking libx11-6:ppc64el (2:1.6.7-1) ... Selecting previously unselected package libxext6:ppc64el. Preparing to unpack .../006-libxext6_2%3a1.3.3-1_ppc64el.deb ... Unpacking libxext6:ppc64el (2:1.3.3-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../007-bsdmainutils_11.1.2ubuntu2_ppc64el.deb ... Unpacking bsdmainutils (11.1.2ubuntu2) ... Selecting previously unselected package libuchardet0:ppc64el. Preparing to unpack .../008-libuchardet0_0.0.6-3_ppc64el.deb ... Unpacking libuchardet0:ppc64el (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.22.4-3_ppc64el.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:ppc64el. Preparing to unpack .../010-libpipeline1_1.5.1-2_ppc64el.deb ... Unpacking libpipeline1:ppc64el (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../011-man-db_2.8.5-2_ppc64el.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libfftw3-double3:ppc64el. Preparing to unpack .../012-libfftw3-double3_3.3.8-2_ppc64el.deb ... Unpacking libfftw3-double3:ppc64el (3.3.8-2) ... Selecting previously unselected package libexpat1:ppc64el. Preparing to unpack .../013-libexpat1_2.2.6-2_ppc64el.deb ... Unpacking libexpat1:ppc64el (2.2.6-2) ... Selecting previously unselected package libfreetype6:ppc64el. Preparing to unpack .../014-libfreetype6_2.9.1-3_ppc64el.deb ... Unpacking libfreetype6:ppc64el (2.9.1-3) ... Selecting previously unselected package ucf. Preparing to unpack .../015-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../016-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../017-fontconfig-config_2.13.1-2ubuntu2_all.deb ... Unpacking fontconfig-config (2.13.1-2ubuntu2) ... Selecting previously unselected package libfontconfig1:ppc64el. Preparing to unpack .../018-libfontconfig1_2.13.1-2ubuntu2_ppc64el.deb ... Unpacking libfontconfig1:ppc64el (2.13.1-2ubuntu2) ... Selecting previously unselected package libjbig0:ppc64el. Preparing to unpack .../019-libjbig0_2.1-3.1build1_ppc64el.deb ... Unpacking libjbig0:ppc64el (2.1-3.1build1) ... Selecting previously unselected package libjpeg-turbo8:ppc64el. Preparing to unpack .../020-libjpeg-turbo8_2.0.1-0ubuntu2_ppc64el.deb ... Unpacking libjpeg-turbo8:ppc64el (2.0.1-0ubuntu2) ... Selecting previously unselected package libjpeg8:ppc64el. Preparing to unpack .../021-libjpeg8_8c-2ubuntu8_ppc64el.deb ... Unpacking libjpeg8:ppc64el (8c-2ubuntu8) ... Selecting previously unselected package liblcms2-2:ppc64el. Preparing to unpack .../022-liblcms2-2_2.9-3_ppc64el.deb ... Unpacking liblcms2-2:ppc64el (2.9-3) ... Selecting previously unselected package libglib2.0-0:ppc64el. Preparing to unpack .../023-libglib2.0-0_2.60.4-1_ppc64el.deb ... Unpacking libglib2.0-0:ppc64el (2.60.4-1) ... Selecting previously unselected package liblqr-1-0:ppc64el. Preparing to unpack .../024-liblqr-1-0_0.4.2-2.1_ppc64el.deb ... Unpacking liblqr-1-0:ppc64el (0.4.2-2.1) ... Selecting previously unselected package libltdl7:ppc64el. Preparing to unpack .../025-libltdl7_2.4.6-10_ppc64el.deb ... Unpacking libltdl7:ppc64el (2.4.6-10) ... Selecting previously unselected package libwebp6:ppc64el. Preparing to unpack .../026-libwebp6_0.6.1-2_ppc64el.deb ... Unpacking libwebp6:ppc64el (0.6.1-2) ... Selecting previously unselected package libtiff5:ppc64el. Preparing to unpack .../027-libtiff5_4.0.10-4_ppc64el.deb ... Unpacking libtiff5:ppc64el (4.0.10-4) ... Selecting previously unselected package libwebpmux3:ppc64el. Preparing to unpack .../028-libwebpmux3_0.6.1-2_ppc64el.deb ... Unpacking libwebpmux3:ppc64el (0.6.1-2) ... Selecting previously unselected package libicu63:ppc64el. Preparing to unpack .../029-libicu63_63.2-2_ppc64el.deb ... Unpacking libicu63:ppc64el (63.2-2) ... Selecting previously unselected package libxml2:ppc64el. Preparing to unpack .../030-libxml2_2.9.4+dfsg1-7ubuntu3_ppc64el.deb ... Unpacking libxml2:ppc64el (2.9.4+dfsg1-7ubuntu3) ... Selecting previously unselected package imagemagick-6-common. Preparing to unpack .../031-imagemagick-6-common_8%3a6.9.10.23+dfsg-2.1ubuntu3_all.deb ... Unpacking imagemagick-6-common (8:6.9.10.23+dfsg-2.1ubuntu3) ... Selecting previously unselected package libmagickcore-6.q16-6:ppc64el. Preparing to unpack .../032-libmagickcore-6.q16-6_8%3a6.9.10.23+dfsg-2.1ubuntu3_ppc64el.deb ... Unpacking libmagickcore-6.q16-6:ppc64el (8:6.9.10.23+dfsg-2.1ubuntu3) ... Selecting previously unselected package libmagickwand-6.q16-6:ppc64el. Preparing to unpack .../033-libmagickwand-6.q16-6_8%3a6.9.10.23+dfsg-2.1ubuntu3_ppc64el.deb ... Unpacking libmagickwand-6.q16-6:ppc64el (8:6.9.10.23+dfsg-2.1ubuntu3) ... Selecting previously unselected package libogg0:ppc64el. Preparing to unpack .../034-libogg0_1.3.2-1_ppc64el.deb ... Unpacking libogg0:ppc64el (1.3.2-1) ... Selecting previously unselected package libxxf86vm1:ppc64el. Preparing to unpack .../035-libxxf86vm1_1%3a1.1.4-1_ppc64el.deb ... Unpacking libxxf86vm1:ppc64el (1:1.1.4-1) ... Selecting previously unselected package tex-common. Preparing to unpack .../036-tex-common_6.11_all.deb ... Unpacking tex-common (6.11) ... Selecting previously unselected package libxcb-keysyms1:ppc64el. Preparing to unpack .../037-libxcb-keysyms1_0.4.0-1_ppc64el.deb ... Unpacking libxcb-keysyms1:ppc64el (0.4.0-1) ... Selecting previously unselected package libxcb-render0:ppc64el. Preparing to unpack .../038-libxcb-render0_1.13.1-2_ppc64el.deb ... Unpacking libxcb-render0:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-render-util0:ppc64el. Preparing to unpack .../039-libxcb-render-util0_0.3.9-1_ppc64el.deb ... 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Preparing to unpack .../091-libasound2_1.1.8-1_ppc64el.deb ... Unpacking libasound2:ppc64el (1.1.8-1) ... Selecting previously unselected package libavahi-common-data:ppc64el. Preparing to unpack .../092-libavahi-common-data_0.7-4ubuntu5_ppc64el.deb ... Unpacking libavahi-common-data:ppc64el (0.7-4ubuntu5) ... Selecting previously unselected package libavahi-common3:ppc64el. Preparing to unpack .../093-libavahi-common3_0.7-4ubuntu5_ppc64el.deb ... Unpacking libavahi-common3:ppc64el (0.7-4ubuntu5) ... Selecting previously unselected package libavahi-client3:ppc64el. Preparing to unpack .../094-libavahi-client3_0.7-4ubuntu5_ppc64el.deb ... Unpacking libavahi-client3:ppc64el (0.7-4ubuntu5) ... Selecting previously unselected package libblas-dev:ppc64el. Preparing to unpack .../095-libblas-dev_3.8.0-2_ppc64el.deb ... Unpacking libblas-dev:ppc64el (3.8.0-2) ... Selecting previously unselected package libboost1.67-dev:ppc64el. 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Preparing to unpack .../111-libsasl2-modules-db_2.1.27+dfsg-1_ppc64el.deb ... Unpacking libsasl2-modules-db:ppc64el (2.1.27+dfsg-1) ... Selecting previously unselected package libsasl2-2:ppc64el. Preparing to unpack .../112-libsasl2-2_2.1.27+dfsg-1_ppc64el.deb ... Unpacking libsasl2-2:ppc64el (2.1.27+dfsg-1) ... Selecting previously unselected package libldap-common. Preparing to unpack .../113-libldap-common_2.4.47+dfsg-3ubuntu2_all.deb ... Unpacking libldap-common (2.4.47+dfsg-3ubuntu2) ... Selecting previously unselected package libldap-2.4-2:ppc64el. Preparing to unpack .../114-libldap-2.4-2_2.4.47+dfsg-3ubuntu2_ppc64el.deb ... Unpacking libldap-2.4-2:ppc64el (2.4.47+dfsg-3ubuntu2) ... Selecting previously unselected package libnghttp2-14:ppc64el. Preparing to unpack .../115-libnghttp2-14_1.37.0-1_ppc64el.deb ... Unpacking libnghttp2-14:ppc64el (1.37.0-1) ... Selecting previously unselected package librtmp1:ppc64el. Preparing to unpack .../116-librtmp1_2.4+20151223.gitfa8646d.1-2_ppc64el.deb ... Unpacking librtmp1:ppc64el (2.4+20151223.gitfa8646d.1-2) ... Selecting previously unselected package libssh-4:ppc64el. Preparing to unpack .../117-libssh-4_0.8.7-1_ppc64el.deb ... Unpacking libssh-4:ppc64el (0.8.7-1) ... Selecting previously unselected package libcurl3-gnutls:ppc64el. Preparing to unpack .../118-libcurl3-gnutls_7.64.0-4ubuntu1_ppc64el.deb ... Unpacking libcurl3-gnutls:ppc64el (7.64.0-4ubuntu1) ... Selecting previously unselected package libcxsparse3:ppc64el. Preparing to unpack .../119-libcxsparse3_1%3a5.4.0+dfsg-1_ppc64el.deb ... Unpacking libcxsparse3:ppc64el (1:5.4.0+dfsg-1) ... Selecting previously unselected package libdrm-amdgpu1:ppc64el. Preparing to unpack .../120-libdrm-amdgpu1_2.4.97-1ubuntu1_ppc64el.deb ... Unpacking libdrm-amdgpu1:ppc64el (2.4.97-1ubuntu1) ... Selecting previously unselected package libdrm-radeon1:ppc64el. 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Unpacking libxcb-present0:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-sync1:ppc64el. Preparing to unpack .../132-libxcb-sync1_1.13.1-2_ppc64el.deb ... Unpacking libxcb-sync1:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-xfixes0:ppc64el. Preparing to unpack .../133-libxcb-xfixes0_1.13.1-2_ppc64el.deb ... Unpacking libxcb-xfixes0:ppc64el (1.13.1-2) ... Selecting previously unselected package libxshmfence1:ppc64el. Preparing to unpack .../134-libxshmfence1_1.3-1_ppc64el.deb ... Unpacking libxshmfence1:ppc64el (1.3-1) ... Selecting previously unselected package libegl-mesa0:ppc64el. Preparing to unpack .../135-libegl-mesa0_19.0.8-0ubuntu1_ppc64el.deb ... Unpacking libegl-mesa0:ppc64el (19.0.8-0ubuntu1) ... Selecting previously unselected package libexpat1-dev:ppc64el. Preparing to unpack .../136-libexpat1-dev_2.2.6-2_ppc64el.deb ... Unpacking libexpat1-dev:ppc64el (2.2.6-2) ... Selecting previously unselected package libfftw3-long3:ppc64el. Preparing to unpack .../137-libfftw3-long3_3.3.8-2_ppc64el.deb ... Unpacking libfftw3-long3:ppc64el (3.3.8-2) ... Selecting previously unselected package libfftw3-single3:ppc64el. Preparing to unpack .../138-libfftw3-single3_3.3.8-2_ppc64el.deb ... Unpacking libfftw3-single3:ppc64el (3.3.8-2) ... Selecting previously unselected package libfftw3-bin. Preparing to unpack .../139-libfftw3-bin_3.3.8-2_ppc64el.deb ... Unpacking libfftw3-bin (3.3.8-2) ... Selecting previously unselected package libfftw3-dev:ppc64el. Preparing to unpack .../140-libfftw3-dev_3.3.8-2_ppc64el.deb ... Unpacking libfftw3-dev:ppc64el (3.3.8-2) ... Selecting previously unselected package libflac8:ppc64el. Preparing to unpack .../141-libflac8_1.3.2-3_ppc64el.deb ... Unpacking libflac8:ppc64el (1.3.2-3) ... Selecting previously unselected package libxfixes3:ppc64el. Preparing to unpack .../142-libxfixes3_1%3a5.0.3-1_ppc64el.deb ... Unpacking libxfixes3:ppc64el (1:5.0.3-1) ... Selecting previously unselected package libxrender1:ppc64el. Preparing to unpack .../143-libxrender1_1%3a0.9.10-1_ppc64el.deb ... Unpacking libxrender1:ppc64el (1:0.9.10-1) ... Selecting previously unselected package libxcursor1:ppc64el. Preparing to unpack .../144-libxcursor1_1%3a1.2.0-1_ppc64el.deb ... Unpacking libxcursor1:ppc64el (1:1.2.0-1) ... Selecting previously unselected package libxft2:ppc64el. Preparing to unpack .../145-libxft2_2.3.2-2_ppc64el.deb ... Unpacking libxft2:ppc64el (2.3.2-2) ... Selecting previously unselected package libxinerama1:ppc64el. Preparing to unpack .../146-libxinerama1_2%3a1.1.4-2_ppc64el.deb ... Unpacking libxinerama1:ppc64el (2:1.1.4-2) ... Selecting previously unselected package libfltk1.3:ppc64el. Preparing to unpack .../147-libfltk1.3_1.3.4-9ubuntu1_ppc64el.deb ... Unpacking libfltk1.3:ppc64el (1.3.4-9ubuntu1) ... Selecting previously unselected package libglvnd0:ppc64el. Preparing to unpack .../148-libglvnd0_1.1.1-0ubuntu1_ppc64el.deb ... Unpacking libglvnd0:ppc64el (1.1.1-0ubuntu1) ... Selecting previously unselected package libxcb-glx0:ppc64el. Preparing to unpack .../149-libxcb-glx0_1.13.1-2_ppc64el.deb ... Unpacking libxcb-glx0:ppc64el (1.13.1-2) ... Selecting previously unselected package libxdamage1:ppc64el. Preparing to unpack .../150-libxdamage1_1%3a1.1.4-3_ppc64el.deb ... Unpacking libxdamage1:ppc64el (1:1.1.4-3) ... Selecting previously unselected package libllvm8:ppc64el. Preparing to unpack .../151-libllvm8_1%3a8.0.1~+rc1-1~exp1_ppc64el.deb ... Unpacking libllvm8:ppc64el (1:8.0.1~+rc1-1~exp1) ... Selecting previously unselected package libsensors-config. Preparing to unpack .../152-libsensors-config_1%3a3.5.0-3ubuntu1_all.deb ... Unpacking libsensors-config (1:3.5.0-3ubuntu1) ... Selecting previously unselected package libsensors5:ppc64el. Preparing to unpack .../153-libsensors5_1%3a3.5.0-3ubuntu1_ppc64el.deb ... Unpacking libsensors5:ppc64el (1:3.5.0-3ubuntu1) ... Selecting previously unselected package libgl1-mesa-dri:ppc64el. Preparing to unpack .../154-libgl1-mesa-dri_19.0.8-0ubuntu1_ppc64el.deb ... Unpacking libgl1-mesa-dri:ppc64el (19.0.8-0ubuntu1) ... Selecting previously unselected package libglx-mesa0:ppc64el. Preparing to unpack .../155-libglx-mesa0_19.0.8-0ubuntu1_ppc64el.deb ... Unpacking libglx-mesa0:ppc64el (19.0.8-0ubuntu1) ... Selecting previously unselected package libglx0:ppc64el. Preparing to unpack .../156-libglx0_1.1.1-0ubuntu1_ppc64el.deb ... Unpacking libglx0:ppc64el (1.1.1-0ubuntu1) ... Selecting previously unselected package libgl1:ppc64el. Preparing to unpack .../157-libgl1_1.1.1-0ubuntu1_ppc64el.deb ... Unpacking libgl1:ppc64el (1.1.1-0ubuntu1) ... Selecting previously unselected package libfltk-gl1.3:ppc64el. Preparing to unpack .../158-libfltk-gl1.3_1.3.4-9ubuntu1_ppc64el.deb ... Unpacking libfltk-gl1.3:ppc64el (1.3.4-9ubuntu1) ... Selecting previously unselected package zlib1g-dev:ppc64el. Preparing to unpack .../159-zlib1g-dev_1%3a1.2.11.dfsg-1ubuntu2_ppc64el.deb ... Unpacking zlib1g-dev:ppc64el (1:1.2.11.dfsg-1ubuntu2) ... Selecting previously unselected package libpng-dev:ppc64el. Preparing to unpack .../160-libpng-dev_1.6.37-1~exp4_ppc64el.deb ... Unpacking libpng-dev:ppc64el (1.6.37-1~exp4) ... Selecting previously unselected package libfreetype6-dev:ppc64el. Preparing to unpack .../161-libfreetype6-dev_2.9.1-3_ppc64el.deb ... Unpacking libfreetype6-dev:ppc64el (2.9.1-3) ... Selecting previously unselected package uuid-dev:ppc64el. Preparing to unpack .../162-uuid-dev_2.33.1-0.1ubuntu2_ppc64el.deb ... Unpacking uuid-dev:ppc64el (2.33.1-0.1ubuntu2) ... Selecting previously unselected package pkg-config. Preparing to unpack .../163-pkg-config_0.29.1-0ubuntu3_ppc64el.deb ... Unpacking pkg-config (0.29.1-0ubuntu3) ... Selecting previously unselected package libfontconfig1-dev:ppc64el. 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Unpacking libjpeg-dev:ppc64el (8c-2ubuntu8) ... Selecting previously unselected package xorg-sgml-doctools. Preparing to unpack .../170-xorg-sgml-doctools_1%3a1.11-1_all.deb ... Unpacking xorg-sgml-doctools (1:1.11-1) ... Selecting previously unselected package x11proto-dev. Preparing to unpack .../171-x11proto-dev_2018.4-4_all.deb ... Unpacking x11proto-dev (2018.4-4) ... Selecting previously unselected package x11proto-core-dev. Preparing to unpack .../172-x11proto-core-dev_2018.4-4_all.deb ... Unpacking x11proto-core-dev (2018.4-4) ... Selecting previously unselected package libxau-dev:ppc64el. Preparing to unpack .../173-libxau-dev_1%3a1.0.8-1_ppc64el.deb ... Unpacking libxau-dev:ppc64el (1:1.0.8-1) ... Selecting previously unselected package libxdmcp-dev:ppc64el. Preparing to unpack .../174-libxdmcp-dev_1%3a1.1.2-3_ppc64el.deb ... Unpacking libxdmcp-dev:ppc64el (1:1.1.2-3) ... Selecting previously unselected package xtrans-dev. 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Preparing to unpack .../180-x11-common_1%3a7.7+19ubuntu12_all.deb ... dpkg-query: no packages found matching nux-tools Unpacking x11-common (1:7.7+19ubuntu12) ... Selecting previously unselected package libice6:ppc64el. Preparing to unpack .../181-libice6_2%3a1.0.9-2_ppc64el.deb ... Unpacking libice6:ppc64el (2:1.0.9-2) ... Selecting previously unselected package libsm6:ppc64el. Preparing to unpack .../182-libsm6_2%3a1.2.3-1_ppc64el.deb ... Unpacking libsm6:ppc64el (2:1.2.3-1) ... Selecting previously unselected package libxt6:ppc64el. Preparing to unpack .../183-libxt6_1%3a1.1.5-1_ppc64el.deb ... Unpacking libxt6:ppc64el (1:1.1.5-1) ... Selecting previously unselected package libice-dev:ppc64el. Preparing to unpack .../184-libice-dev_2%3a1.0.9-2_ppc64el.deb ... Unpacking libice-dev:ppc64el (2:1.0.9-2) ... Selecting previously unselected package libsm-dev:ppc64el. Preparing to unpack .../185-libsm-dev_2%3a1.2.3-1_ppc64el.deb ... Unpacking libsm-dev:ppc64el (2:1.2.3-1) ... Selecting previously unselected package libxt-dev:ppc64el. Preparing to unpack .../186-libxt-dev_1%3a1.1.5-1_ppc64el.deb ... Unpacking libxt-dev:ppc64el (1:1.1.5-1) ... Selecting previously unselected package libvpx5:ppc64el. Preparing to unpack .../187-libvpx5_1.7.0-3_ppc64el.deb ... Unpacking libvpx5:ppc64el (1.7.0-3) ... Selecting previously unselected package libvpx-dev:ppc64el. Preparing to unpack .../188-libvpx-dev_1.7.0-3_ppc64el.deb ... Unpacking libvpx-dev:ppc64el (1.7.0-3) ... Selecting previously unselected package libjbig-dev:ppc64el. Preparing to unpack .../189-libjbig-dev_2.1-3.1build1_ppc64el.deb ... Unpacking libjbig-dev:ppc64el (2.1-3.1build1) ... Selecting previously unselected package liblzma-dev:ppc64el. Preparing to unpack .../190-liblzma-dev_5.2.4-1_ppc64el.deb ... Unpacking liblzma-dev:ppc64el (5.2.4-1) ... Selecting previously unselected package libtiffxx5:ppc64el. Preparing to unpack .../191-libtiffxx5_4.0.10-4_ppc64el.deb ... Unpacking libtiffxx5:ppc64el (4.0.10-4) ... Selecting previously unselected package libtiff-dev:ppc64el. Preparing to unpack .../192-libtiff-dev_4.0.10-4_ppc64el.deb ... Unpacking libtiff-dev:ppc64el (4.0.10-4) ... Selecting previously unselected package libgd-dev:ppc64el. Preparing to unpack .../193-libgd-dev_2.2.5-5.2_ppc64el.deb ... Unpacking libgd-dev:ppc64el (2.2.5-5.2) ... Selecting previously unselected package libgdchart-gd2-noxpm. Preparing to unpack .../194-libgdchart-gd2-noxpm_0.11.5-10_ppc64el.deb ... Unpacking libgdchart-gd2-noxpm (0.11.5-10) ... Selecting previously unselected package libgdchart-gd2-noxpm-dev. Preparing to unpack .../195-libgdchart-gd2-noxpm-dev_0.11.5-10_ppc64el.deb ... Unpacking libgdchart-gd2-noxpm-dev (0.11.5-10) ... Selecting previously unselected package libnifti2. Preparing to unpack .../196-libnifti2_2.0.0-3_ppc64el.deb ... Unpacking libnifti2 (2.0.0-3) ... Selecting previously unselected package libgiftiio0. 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Preparing to unpack .../203-libglu1-mesa_9.0.0-2.1build1_ppc64el.deb ... Unpacking libglu1-mesa:ppc64el (9.0.0-2.1build1) ... Selecting previously unselected package mesa-common-dev:ppc64el. Preparing to unpack .../204-mesa-common-dev_19.0.8-0ubuntu1_ppc64el.deb ... Unpacking mesa-common-dev:ppc64el (19.0.8-0ubuntu1) ... Selecting previously unselected package libglvnd-core-dev:ppc64el. Preparing to unpack .../205-libglvnd-core-dev_1.1.1-0ubuntu1_ppc64el.deb ... Unpacking libglvnd-core-dev:ppc64el (1.1.1-0ubuntu1) ... Selecting previously unselected package libegl1:ppc64el. Preparing to unpack .../206-libegl1_1.1.1-0ubuntu1_ppc64el.deb ... Unpacking libegl1:ppc64el (1.1.1-0ubuntu1) ... Selecting previously unselected package libgles2:ppc64el. Preparing to unpack .../207-libgles2_1.1.1-0ubuntu1_ppc64el.deb ... Unpacking libgles2:ppc64el (1.1.1-0ubuntu1) ... Selecting previously unselected package libopengl0:ppc64el. Preparing to unpack .../208-libopengl0_1.1.1-0ubuntu1_ppc64el.deb ... Unpacking libopengl0:ppc64el (1.1.1-0ubuntu1) ... Selecting previously unselected package libglvnd-dev:ppc64el. Preparing to unpack .../209-libglvnd-dev_1.1.1-0ubuntu1_ppc64el.deb ... Unpacking libglvnd-dev:ppc64el (1.1.1-0ubuntu1) ... Selecting previously unselected package libx11-xcb-dev:ppc64el. Preparing to unpack .../210-libx11-xcb-dev_2%3a1.6.7-1_ppc64el.deb ... Unpacking libx11-xcb-dev:ppc64el (2:1.6.7-1) ... Selecting previously unselected package libxcb-dri3-dev:ppc64el. Preparing to unpack .../211-libxcb-dri3-dev_1.13.1-2_ppc64el.deb ... Unpacking libxcb-dri3-dev:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-randr0:ppc64el. Preparing to unpack .../212-libxcb-randr0_1.13.1-2_ppc64el.deb ... Unpacking libxcb-randr0:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-render0-dev:ppc64el. Preparing to unpack .../213-libxcb-render0-dev_1.13.1-2_ppc64el.deb ... Unpacking libxcb-render0-dev:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-randr0-dev:ppc64el. Preparing to unpack .../214-libxcb-randr0-dev_1.13.1-2_ppc64el.deb ... Unpacking libxcb-randr0-dev:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-shape0:ppc64el. Preparing to unpack .../215-libxcb-shape0_1.13.1-2_ppc64el.deb ... Unpacking libxcb-shape0:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-shape0-dev:ppc64el. Preparing to unpack .../216-libxcb-shape0-dev_1.13.1-2_ppc64el.deb ... Unpacking libxcb-shape0-dev:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-xfixes0-dev:ppc64el. Preparing to unpack .../217-libxcb-xfixes0-dev_1.13.1-2_ppc64el.deb ... Unpacking libxcb-xfixes0-dev:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-sync-dev:ppc64el. Preparing to unpack .../218-libxcb-sync-dev_1.13.1-2_ppc64el.deb ... Unpacking libxcb-sync-dev:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-present-dev:ppc64el. Preparing to unpack .../219-libxcb-present-dev_1.13.1-2_ppc64el.deb ... Unpacking libxcb-present-dev:ppc64el (1.13.1-2) ... Selecting previously unselected package libxshmfence-dev:ppc64el. Preparing to unpack .../220-libxshmfence-dev_1.3-1_ppc64el.deb ... Unpacking libxshmfence-dev:ppc64el (1.3-1) ... Selecting previously unselected package libxcb-dri2-0-dev:ppc64el. Preparing to unpack .../221-libxcb-dri2-0-dev_1.13.1-2_ppc64el.deb ... Unpacking libxcb-dri2-0-dev:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-glx0-dev:ppc64el. Preparing to unpack .../222-libxcb-glx0-dev_1.13.1-2_ppc64el.deb ... Unpacking libxcb-glx0-dev:ppc64el (1.13.1-2) ... Selecting previously unselected package x11proto-fixes-dev. Preparing to unpack .../223-x11proto-fixes-dev_1%3a2018.4-4_all.deb ... Unpacking x11proto-fixes-dev (1:2018.4-4) ... Selecting previously unselected package libxfixes-dev:ppc64el. Preparing to unpack .../224-libxfixes-dev_1%3a5.0.3-1_ppc64el.deb ... Unpacking libxfixes-dev:ppc64el (1:5.0.3-1) ... Selecting previously unselected package x11proto-damage-dev. Preparing to unpack .../225-x11proto-damage-dev_1%3a2018.4-4_all.deb ... Unpacking x11proto-damage-dev (1:2018.4-4) ... Selecting previously unselected package libxdamage-dev:ppc64el. Preparing to unpack .../226-libxdamage-dev_1%3a1.1.4-3_ppc64el.deb ... Unpacking libxdamage-dev:ppc64el (1:1.1.4-3) ... Selecting previously unselected package x11proto-xext-dev. Preparing to unpack .../227-x11proto-xext-dev_2018.4-4_all.deb ... Unpacking x11proto-xext-dev (2018.4-4) ... Selecting previously unselected package libxext-dev:ppc64el. Preparing to unpack .../228-libxext-dev_2%3a1.3.3-1_ppc64el.deb ... Unpacking libxext-dev:ppc64el (2:1.3.3-1) ... Selecting previously unselected package x11proto-xf86vidmode-dev. Preparing to unpack .../229-x11proto-xf86vidmode-dev_2018.4-4_all.deb ... Unpacking x11proto-xf86vidmode-dev (2018.4-4) ... Selecting previously unselected package libxxf86vm-dev:ppc64el. Preparing to unpack .../230-libxxf86vm-dev_1%3a1.1.4-1_ppc64el.deb ... Unpacking libxxf86vm-dev:ppc64el (1:1.1.4-1) ... Selecting previously unselected package libgl1-mesa-dev:ppc64el. Preparing to unpack .../231-libgl1-mesa-dev_19.0.8-0ubuntu1_ppc64el.deb ... Unpacking libgl1-mesa-dev:ppc64el (19.0.8-0ubuntu1) ... Selecting previously unselected package libglu1-mesa-dev:ppc64el. Preparing to unpack .../232-libglu1-mesa-dev_9.0.0-2.1build1_ppc64el.deb ... Unpacking libglu1-mesa-dev:ppc64el (9.0.0-2.1build1) ... Selecting previously unselected package libwmf0.2-7:ppc64el. Preparing to unpack .../233-libwmf0.2-7_0.2.8.4-14_ppc64el.deb ... Unpacking libwmf0.2-7:ppc64el (0.2.8.4-14) ... Selecting previously unselected package libgraphicsmagick-q16-3. Preparing to unpack .../234-libgraphicsmagick-q16-3_1.4+really1.3.32-1_ppc64el.deb ... Unpacking libgraphicsmagick-q16-3 (1.4+really1.3.32-1) ... 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Selecting previously unselected package libwacom2:ppc64el. Preparing to unpack .../246-libwacom2_0.32-1_ppc64el.deb ... Unpacking libwacom2:ppc64el (0.32-1) ... Selecting previously unselected package libinput-bin. Preparing to unpack .../247-libinput-bin_1.12.6-2_ppc64el.deb ... Unpacking libinput-bin (1.12.6-2) ... Selecting previously unselected package libmtdev1:ppc64el. Preparing to unpack .../248-libmtdev1_1.1.5-1ubuntu3_ppc64el.deb ... Unpacking libmtdev1:ppc64el (1.1.5-1ubuntu3) ... Selecting previously unselected package libinput10:ppc64el. Preparing to unpack .../249-libinput10_1.12.6-2_ppc64el.deb ... Unpacking libinput10:ppc64el (1.12.6-2) ... Selecting previously unselected package libsamplerate0:ppc64el. Preparing to unpack .../250-libsamplerate0_0.1.9-2_ppc64el.deb ... Unpacking libsamplerate0:ppc64el (0.1.9-2) ... Selecting previously unselected package libjack-jackd2-0:ppc64el. Preparing to unpack .../251-libjack-jackd2-0_1.9.12~dfsg-2build1_ppc64el.deb ... Unpacking libjack-jackd2-0:ppc64el (1.9.12~dfsg-2build1) ... Selecting previously unselected package liblapack-dev:ppc64el. Preparing to unpack .../252-liblapack-dev_3.8.0-2_ppc64el.deb ... Unpacking liblapack-dev:ppc64el (3.8.0-2) ... Selecting previously unselected package libncurses-dev:ppc64el. Preparing to unpack .../253-libncurses-dev_6.1+20181013-2ubuntu2_ppc64el.deb ... Unpacking libncurses-dev:ppc64el (6.1+20181013-2ubuntu2) ... Selecting previously unselected package libnewmat10ldbl. Preparing to unpack .../254-libnewmat10ldbl_1.10.4-8_ppc64el.deb ... Unpacking libnewmat10ldbl (1.10.4-8) ... Selecting previously unselected package libnewmat10-dev. Preparing to unpack .../255-libnewmat10-dev_1.10.4-8_ppc64el.deb ... Unpacking libnewmat10-dev (1.10.4-8) ... Selecting previously unselected package libqrupdate1:ppc64el. Preparing to unpack .../256-libqrupdate1_1.1.2-3_ppc64el.deb ... Unpacking libqrupdate1:ppc64el (1.1.2-3) ... Selecting previously unselected package libumfpack5:ppc64el. Preparing to unpack .../257-libumfpack5_1%3a5.4.0+dfsg-1_ppc64el.deb ... Unpacking libumfpack5:ppc64el (1:5.4.0+dfsg-1) ... Selecting previously unselected package liboctave6:ppc64el. Preparing to unpack .../258-liboctave6_4.4.1-6_ppc64el.deb ... Unpacking liboctave6:ppc64el (4.4.1-6) ... Selecting previously unselected package libpcre2-16-0:ppc64el. Preparing to unpack .../259-libpcre2-16-0_10.32-5_ppc64el.deb ... Unpacking libpcre2-16-0:ppc64el (10.32-5) ... Selecting previously unselected package libportaudio2:ppc64el. Preparing to unpack .../260-libportaudio2_19.6.0-1_ppc64el.deb ... Unpacking libportaudio2:ppc64el (19.6.0-1) ... Selecting previously unselected package libqhull7:ppc64el. Preparing to unpack .../261-libqhull7_2015.2-4_ppc64el.deb ... Unpacking libqhull7:ppc64el (2015.2-4) ... Selecting previously unselected package libqscintilla2-qt5-l10n. 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Selecting previously unselected package libxcb-icccm4:ppc64el. Preparing to unpack .../267-libxcb-icccm4_0.4.1-1.1_ppc64el.deb ... Unpacking libxcb-icccm4:ppc64el (0.4.1-1.1) ... Selecting previously unselected package libxcb-shm0:ppc64el. Preparing to unpack .../268-libxcb-shm0_1.13.1-2_ppc64el.deb ... Unpacking libxcb-shm0:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-util1:ppc64el. Preparing to unpack .../269-libxcb-util1_0.4.0-0ubuntu3_ppc64el.deb ... Unpacking libxcb-util1:ppc64el (0.4.0-0ubuntu3) ... Selecting previously unselected package libxcb-image0:ppc64el. Preparing to unpack .../270-libxcb-image0_0.4.0-1build1_ppc64el.deb ... Unpacking libxcb-image0:ppc64el (0.4.0-1build1) ... Selecting previously unselected package libxcb-xinerama0:ppc64el. Preparing to unpack .../271-libxcb-xinerama0_1.13.1-2_ppc64el.deb ... Unpacking libxcb-xinerama0:ppc64el (1.13.1-2) ... Selecting previously unselected package libxcb-xinput0:ppc64el. 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Unpacking libqt5widgets5:ppc64el (5.12.2+dfsg-4ubuntu2) ... Selecting previously unselected package libqt5printsupport5:ppc64el. Preparing to unpack .../278-libqt5printsupport5_5.12.2+dfsg-4ubuntu2_ppc64el.deb ... Unpacking libqt5printsupport5:ppc64el (5.12.2+dfsg-4ubuntu2) ... Selecting previously unselected package libqscintilla2-qt5-13. Preparing to unpack .../279-libqscintilla2-qt5-13_2.10.4+dfsg-1build2_ppc64el.deb ... Unpacking libqscintilla2-qt5-13 (2.10.4+dfsg-1build2) ... Selecting previously unselected package libqt5sql5:ppc64el. Preparing to unpack .../280-libqt5sql5_5.12.2+dfsg-4ubuntu2_ppc64el.deb ... Unpacking libqt5sql5:ppc64el (5.12.2+dfsg-4ubuntu2) ... Selecting previously unselected package libqt5help5:ppc64el. Preparing to unpack .../281-libqt5help5_5.12.2-1_ppc64el.deb ... Unpacking libqt5help5:ppc64el (5.12.2-1) ... Selecting previously unselected package libreadline-dev:ppc64el. Preparing to unpack .../282-libreadline-dev_8.0-1_ppc64el.deb ... Unpacking libreadline-dev:ppc64el (8.0-1) ... Selecting previously unselected package libvorbis0a:ppc64el. Preparing to unpack .../283-libvorbis0a_1.3.6-2_ppc64el.deb ... Unpacking libvorbis0a:ppc64el (1.3.6-2) ... Selecting previously unselected package libvorbisenc2:ppc64el. Preparing to unpack .../284-libvorbisenc2_1.3.6-2_ppc64el.deb ... Unpacking libvorbisenc2:ppc64el (1.3.6-2) ... Selecting previously unselected package libsndfile1:ppc64el. Preparing to unpack .../285-libsndfile1_1.0.28-6_ppc64el.deb ... Unpacking libsndfile1:ppc64el (1.0.28-6) ... Selecting previously unselected package libtcl8.6:ppc64el. Preparing to unpack .../286-libtcl8.6_8.6.9+dfsg-2_ppc64el.deb ... Unpacking libtcl8.6:ppc64el (8.6.9+dfsg-2) ... Selecting previously unselected package libtext-unidecode-perl. Preparing to unpack .../287-libtext-unidecode-perl_1.30-1_all.deb ... Unpacking libtext-unidecode-perl (1.30-1) ... Selecting previously unselected package libxml-namespacesupport-perl. 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Selecting previously unselected package texinfo. Preparing to unpack .../294-texinfo_6.5.0.dfsg.1-5_ppc64el.deb ... Unpacking texinfo (6.5.0.dfsg.1-5) ... Selecting previously unselected package octave-common. Preparing to unpack .../295-octave-common_4.4.1-6_all.deb ... Unpacking octave-common (4.4.1-6) ... Selecting previously unselected package octave. Preparing to unpack .../296-octave_4.4.1-6_ppc64el.deb ... Unpacking octave (4.4.1-6) ... Selecting previously unselected package liboctave-dev. Preparing to unpack .../297-liboctave-dev_4.4.1-6_ppc64el.deb ... Unpacking liboctave-dev (4.4.1-6) ... Selecting previously unselected package sbuild-build-depends-fsl-dummy. Preparing to unpack .../298-sbuild-build-depends-fsl-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-fsl-dummy (0.invalid.0) ... Setting up libboost1.67-dev:ppc64el (1.67.0-13ubuntu1) ... Setting up libexpat1:ppc64el (2.2.6-2) ... Setting up libpipeline1:ppc64el (1.5.1-2) ... Setting up libgraphite2-3:ppc64el (1.3.13-7) ... Setting up liblcms2-2:ppc64el (2.9-3) ... Setting up libwayland-server0:ppc64el (1.16.0-1ubuntu2) ... Setting up libx11-xcb1:ppc64el (2:1.6.7-1) ... Setting up libxau6:ppc64el (1:1.0.8-1) ... Setting up imagemagick-6-common (8:6.9.10.23+dfsg-2.1ubuntu3) ... Setting up libkeyutils1:ppc64el (1.6-6) ... Setting up libncurses-dev:ppc64el (6.1+20181013-2ubuntu2) ... Setting up libpsl5:ppc64el (0.20.2-2) ... Setting up libfftw3-single3:ppc64el (3.3.8-2) ... Setting up libogg0:ppc64el (1.3.2-1) ... Setting up libglvnd-core-dev:ppc64el (1.1.1-0ubuntu1) ... Setting up hdf5-helpers (1.10.4+repack-10) ... Setting up hicolor-icon-theme (0.17-2) ... Setting up libnifti2 (2.0.0-3) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up libgiftiio0 (1.0.9-3) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:ppc64el (2.60.4-1) ... No schema files found: doing nothing. Setting up libglvnd0:ppc64el (1.1.1-0ubuntu1) ... Setting up libqscintilla2-qt5-l10n (2.10.4+dfsg-1build2) ... Setting up x11-common (1:7.7+19ubuntu12) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libsensors-config (1:3.5.0-3ubuntu1) ... Setting up libnghttp2-14:ppc64el (1.37.0-1) ... Setting up libmagic1:ppc64el (1:5.35-4) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up libfftw3-long3:ppc64el (3.3.8-2) ... Setting up gettext-base (0.19.8.1-9) ... Setting up xkb-data (2.26-2ubuntu1) ... Setting up libqhull7:ppc64el (2015.2-4) ... Setting up libmetis5:ppc64el (5.1.0.dfsg-5) ... Setting up file (1:5.35-4) ... Setting up libreadline-dev:ppc64el (8.0-1) ... Setting up libldap-common (2.4.47+dfsg-3ubuntu2) ... Setting up libpthread-stubs0-dev:ppc64el (0.4-1) ... Setting up libjbig0:ppc64el (2.1-3.1build1) ... Setting up octave-common (4.4.1-6) ... Setting up libpcre2-16-0:ppc64el (10.32-5) ... Setting up libaec0:ppc64el (1.0.2-1) ... Setting up libicu63:ppc64el (63.2-2) ... Setting up libopengl0:ppc64el (1.1.1-0ubuntu1) ... Setting up libflac8:ppc64el (1.3.2-3) ... Setting up libkrb5support0:ppc64el (1.17-3) ... Setting up libsasl2-modules-db:ppc64el (2.1.27+dfsg-1) ... Setting up libasound2-data (1.1.8-1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up xtrans-dev (1.3.5-1) ... Setting up autotools-dev (20180224.1) ... Setting up libblas3:ppc64el (3.8.0-2) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode Setting up libgles2:ppc64el (1.1.1-0ubuntu1) ... Setting up libexpat1-dev:ppc64el (2.2.6-2) ... Setting up libfreetype6:ppc64el (2.9.1-3) ... Setting up libx11-data (2:1.6.7-1) ... Setting up librtmp1:ppc64el (2.4+20151223.gitfa8646d.1-2) ... Setting up uuid-dev:ppc64el (2.33.1-0.1ubuntu2) ... Setting up libavahi-common-data:ppc64el (0.7-4ubuntu5) ... Setting up libgles1:ppc64el (1.1.1-0ubuntu1) ... Setting up libdbus-1-3:ppc64el (1.12.14-1ubuntu2) ... Setting up libsigsegv2:ppc64el (2.12-2) ... Setting up libvorbis0a:ppc64el (1.3.6-2) ... Setting up libtcl8.6:ppc64el (8.6.9+dfsg-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libwebp6:ppc64el (0.6.1-2) ... Setting up pkg-config (0.29.1-0ubuntu3) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up ucf (3.0038+nmu1) ... Setting up libsensors5:ppc64el (1:3.5.0-3ubuntu1) ... Setting up libk5crypto3:ppc64el (1.17-3) ... Setting up libjpeg-turbo8:ppc64el (2.0.1-0ubuntu2) ... Setting up libnewmat10ldbl (1.10.4-8) ... Setting up libltdl7:ppc64el (2.4.6-10) ... Setting up libfftw3-double3:ppc64el (3.3.8-2) ... Setting up libglapi-mesa:ppc64el (19.0.8-0ubuntu1) ... Setting up libsasl2-2:ppc64el (2.1.27+dfsg-1) ... Setting up libgfortran5:ppc64el (9.1.0-4ubuntu1) ... Setting up libmtdev1:ppc64el (1.1.5-1ubuntu3) ... Setting up libroken18-heimdal:ppc64el (7.5.0+dfsg-3) ... Setting up libnewmat10-dev (1.10.4-8) ... Setting up liblzma-dev:ppc64el (5.2.4-1) ... Setting up zlib1g-dev:ppc64el (1:1.2.11.dfsg-1ubuntu2) ... Setting up liblqr-1-0:ppc64el (0.4.2-2.1) ... Setting up libxshmfence1:ppc64el (1.3-1) ... Setting up libuchardet0:ppc64el (0.0.6-3) ... Setting up libasound2:ppc64el (1.1.8-1) ... Setting up libharfbuzz0b:ppc64el (2.4.0-1) ... Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up libcxsparse3:ppc64el (1:5.4.0+dfsg-1) ... Setting up libkrb5-3:ppc64el (1.17-3) ... Setting up libboost-dev:ppc64el (1.67.0.1) ... Setting up libtext-unidecode-perl (1.30-1) ... Setting up libnifti-dev (2.0.0-3) ... Setting up libsamplerate0:ppc64el (0.1.9-2) ... Setting up libwebpmux3:ppc64el (0.6.1-2) ... Setting up libbsd0:ppc64el (0.9.1-2) ... Setting up libdrm-common (2.4.97-1ubuntu1) ... Setting up libelf1:ppc64el (0.176-1.1) ... Setting up libevdev2:ppc64el (1.6.0+dfsg-1) ... Setting up libxml2:ppc64el (2.9.4+dfsg1-7ubuntu3) ... Setting up libdouble-conversion1:ppc64el (3.1.0-3) ... Setting up libsuitesparseconfig5:ppc64el (1:5.4.0+dfsg-1) ... Setting up libgudev-1.0-0:ppc64el (1:232-2) ... Setting up libvpx5:ppc64el (1.7.0-3) ... Setting up libblas-dev:ppc64el (3.8.0-2) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so to provide /usr/lib/powerpc64le-linux-gnu/libblas.so (libblas.so-powerpc64le-linux-gnu) in auto mode Setting up libsz2:ppc64el (1.0.2-1) ... Setting up libvorbisenc2:ppc64el (1.3.6-2) ... Setting up libheimbase1-heimdal:ppc64el (7.5.0+dfsg-3) ... Setting up libwacom-common (0.32-1) ... Setting up libxkbcommon0:ppc64el (0.8.2-1) ... Setting up libwayland-client0:ppc64el (1.16.0-1ubuntu2) ... Setting up libjpeg8:ppc64el (8c-2ubuntu8) ... Setting up x11proto-dev (2018.4-4) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libgfortran-8-dev:ppc64el (8.3.0-14ubuntu1) ... Setting up libamd2:ppc64el (1:5.4.0+dfsg-1) ... Setting up libice6:ppc64el (2:1.0.9-2) ... Setting up libjpeg-turbo8-dev:ppc64el (2.0.1-0ubuntu2) ... Setting up libxdmcp6:ppc64el (1:1.1.2-3) ... Setting up tcl8.6 (8.6.9+dfsg-2) ... Setting up liblapack3:ppc64el (3.8.0-2) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode Setting up libxcb1:ppc64el (1.13.1-2) ... Setting up libxcb-xfixes0:ppc64el (1.13.1-2) ... Setting up libxau-dev:ppc64el (1:1.0.8-1) ... Setting up libcolamd2:ppc64el (1:5.4.0+dfsg-1) ... Setting up libxcb-xinput0:ppc64el (1.13.1-2) ... Setting up libice-dev:ppc64el (2:1.0.9-2) ... Setting up libtool (2.4.6-10) ... Setting up libxcb-render0:ppc64el (1.13.1-2) ... Setting up libxshmfence-dev:ppc64el (1.3-1) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up fontconfig-config (2.13.1-2ubuntu2) ... Setting up gfortran-8 (8.3.0-14ubuntu1) ... Setting up libxcb-glx0:ppc64el (1.13.1-2) ... Setting up libasn1-8-heimdal:ppc64el (7.5.0+dfsg-3) ... Setting up libedit2:ppc64el (3.1-20190324-1~exp1) ... Setting up libpng-dev:ppc64el (1.6.37-1~exp4) ... Setting up libxcb-keysyms1:ppc64el (0.4.0-1) ... Setting up libaec-dev:ppc64el (1.0.2-1) ... Setting up libarpack2:ppc64el (3.7.0-2) ... Setting up libxcb-shape0:ppc64el (1.13.1-2) ... Setting up libavahi-common3:ppc64el (0.7-4ubuntu5) ... Setting up libgiftiio-dev (1.0.9-3) ... Setting up libjbig-dev:ppc64el (2.1-3.1build1) ... Setting up m4 (1.4.18-2) ... Setting up libxcb-render-util0:ppc64el (0.3.9-1) ... Setting up libxcb-shm0:ppc64el (1.13.1-2) ... Setting up libxcb-icccm4:ppc64el (0.4.1-1.1) ... Setting up libqrupdate1:ppc64el (1.1.2-3) ... Setting up libxml-sax-perl (1.00+dfsg-1.1~build1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libhcrypto4-heimdal:ppc64el (7.5.0+dfsg-3) ... Setting up gfortran (4:8.3.0-1ubuntu3) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libxcb-util1:ppc64el (0.4.0-0ubuntu3) ... Setting up libfreetype6-dev:ppc64el (2.9.1-3) ... Setting up libxcb-xkb1:ppc64el (1.13.1-2) ... Setting up libxcb-image0:ppc64el (0.4.0-1build1) ... Setting up libxcb-present0:ppc64el (1.13.1-2) ... Setting up tex-common (6.11) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libcamd2:ppc64el (1:5.4.0+dfsg-1) ... Setting up libxdmcp-dev:ppc64el (1:1.1.2-3) ... Setting up libwind0-heimdal:ppc64el (7.5.0+dfsg-3) ... Setting up libxcb-xinerama0:ppc64el (1.13.1-2) ... Setting up x11proto-damage-dev (1:2018.4-4) ... Setting up libvpx-dev:ppc64el (1.7.0-3) ... Setting up libglpk40:ppc64el (4.65-2) ... Setting up libxcb-sync1:ppc64el (1.13.1-2) ... Setting up x11proto-core-dev (2018.4-4) ... Setting up libhdf5-103:ppc64el (1.10.4+repack-10) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libxkbcommon-x11-0:ppc64el (0.8.2-1) ... Setting up liblapack-dev:ppc64el (3.8.0-2) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so (liblapack.so-powerpc64le-linux-gnu) in auto mode Setting up libgssapi-krb5-2:ppc64el (1.17-3) ... Setting up libcroco3:ppc64el (0.6.12-3) ... Setting up libqt5core5a:ppc64el (5.12.2+dfsg-4ubuntu2) ... Setting up libssh-4:ppc64el (0.8.7-1) ... Setting up autoconf (2.69-11) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxcb-dri2-0:ppc64el (1.13.1-2) ... Setting up x11proto-xf86vidmode-dev (2018.4-4) ... Setting up libjack-jackd2-0:ppc64el (1.9.12~dfsg-2build1) ... Setting up x11proto-xext-dev (2018.4-4) ... Setting up libdrm2:ppc64el (2.4.97-1ubuntu1) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libqt5dbus5:ppc64el (5.12.2+dfsg-4ubuntu2) ... Setting up libccolamd2:ppc64el (1:5.4.0+dfsg-1) ... Setting up libxcb-randr0:ppc64el (1.13.1-2) ... Setting up tcl (8.6.9+1) ... Setting up libx11-6:ppc64el (2:1.6.7-1) ... Setting up libtiff5:ppc64el (4.0.10-4) ... Setting up libfontconfig1:ppc64el (2.13.1-2ubuntu2) ... Setting up libsndfile1:ppc64el (1.0.28-6) ... Setting up libjpeg8-dev:ppc64el (8c-2ubuntu8) ... Setting up x11proto-fixes-dev (1:2018.4-4) ... Setting up libwacom2:ppc64el (0.32-1) ... Setting up libsm6:ppc64el (2:1.2.3-1) ... Setting up libfftw3-dev:ppc64el (3.3.8-2) ... Setting up libavahi-client3:ppc64el (0.7-4ubuntu5) ... Setting up libcholmod3:ppc64el (1:5.4.0+dfsg-1) ... Setting up libtiffxx5:ppc64el (4.0.10-4) ... Setting up libdrm-amdgpu1:ppc64el (2.4.97-1ubuntu1) ... Setting up automake (1:1.16.1-4ubuntu3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libllvm8:ppc64el (1:8.0.1~+rc1-1~exp1) ... Setting up libxcb-dri3-0:ppc64el (1.13.1-2) ... Setting up libportaudio2:ppc64el (19.6.0-1) ... Setting up fontconfig (2.13.1-2ubuntu2) ... Regenerating fonts cache... done. Setting up libdrm-nouveau2:ppc64el (2.4.97-1ubuntu1) ... Setting up gettext (0.19.8.1-9) ... Setting up libfontconfig1-dev:ppc64el (2.13.1-2ubuntu2) ... Setting up libxdamage1:ppc64el (1:1.1.4-3) ... Setting up libxcb1-dev:ppc64el (1.13.1-2) ... Setting up libxpm4:ppc64el (1:3.5.12-1) ... Setting up libxrender1:ppc64el (1:0.9.10-1) ... Setting up libgbm1:ppc64el (19.0.8-0ubuntu1) ... Setting up libwmf0.2-7:ppc64el (0.2.8.4-14) ... Setting up libsm-dev:ppc64el (2:1.2.3-1) ... Setting up libdrm-radeon1:ppc64el (2.4.97-1ubuntu1) ... Setting up libhx509-5-heimdal:ppc64el (7.5.0+dfsg-3) ... Setting up libgl1-mesa-dri:ppc64el (19.0.8-0ubuntu1) ... Setting up libhdf5-cpp-103:ppc64el (1.10.4+repack-10) ... Setting up libjpeg-dev:ppc64el (8c-2ubuntu8) ... Setting up libx11-dev:ppc64el (2:1.6.7-1) ... Setting up libxext6:ppc64el (2:1.3.3-1) ... Setting up libxcb-dri3-dev:ppc64el (1.13.1-2) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libqt5network5:ppc64el (5.12.2+dfsg-4ubuntu2) ... Setting up libxxf86vm1:ppc64el (1:1.1.4-1) ... Setting up libinput-bin (1.12.6-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libqt5sql5:ppc64el (5.12.2+dfsg-4ubuntu2) ... Setting up libmagickcore-6.q16-6:ppc64el (8:6.9.10.23+dfsg-2.1ubuntu3) ... Setting up libegl-mesa0:ppc64el (19.0.8-0ubuntu1) ... Setting up libxcb-dri2-0-dev:ppc64el (1.13.1-2) ... Setting up libumfpack5:ppc64el (1:5.4.0+dfsg-1) ... Setting up libtiff-dev:ppc64el (4.0.10-4) ... Setting up libxfixes3:ppc64el (1:5.0.3-1) ... Setting up libxinerama1:ppc64el (2:1.1.4-2) ... Setting up libxpm-dev:ppc64el (1:3.5.12-1) ... Setting up libhdf5-dev (1.10.4+repack-10) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/powerpc64le-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libgd3:ppc64el (2.2.5-5.2) ... Setting up libgraphicsmagick-q16-3 (1.4+really1.3.32-1) ... Setting up libxcb-render0-dev:ppc64el (1.13.1-2) ... Setting up libxcb-glx0-dev:ppc64el (1.13.1-2) ... Setting up libxt6:ppc64el (1:1.1.5-1) ... Setting up libgdchart-gd2-noxpm (0.11.5-10) ... Setting up texinfo (6.5.0.dfsg.1-5) ... Setting up libxcb-shape0-dev:ppc64el (1.13.1-2) ... Setting up libxext-dev:ppc64el (2:1.3.3-1) ... Setting up libcups2:ppc64el (2.2.10-6ubuntu1) ... Setting up libegl1:ppc64el (1.1.1-0ubuntu1) ... Setting up libmagickwand-6.q16-6:ppc64el (8:6.9.10.23+dfsg-2.1ubuntu3) ... Setting up libxcb-sync-dev:ppc64el (1.13.1-2) ... Setting up libgraphicsmagick++-q16-12 (1.4+really1.3.32-1) ... Setting up libxcb-xfixes0-dev:ppc64el (1.13.1-2) ... Setting up libkrb5-26-heimdal:ppc64el (7.5.0+dfsg-3) ... Setting up libinput10:ppc64el (1.12.6-2) ... Setting up libx11-xcb-dev:ppc64el (2:1.6.7-1) ... Setting up libdrm-dev:ppc64el (2.4.97-1ubuntu1) ... Setting up libxft2:ppc64el (2.3.2-2) ... Setting up libglx-mesa0:ppc64el (19.0.8-0ubuntu1) ... Setting up libglx0:ppc64el (1.1.1-0ubuntu1) ... Setting up po-debconf (1.0.21) ... Setting up libxxf86vm-dev:ppc64el (1:1.1.4-1) ... Setting up libxcursor1:ppc64el (1:1.2.0-1) ... Setting up libheimntlm0-heimdal:ppc64el (7.5.0+dfsg-3) ... Setting up libxfixes-dev:ppc64el (1:5.0.3-1) ... Setting up libgl1:ppc64el (1.1.1-0ubuntu1) ... Setting up libgssapi3-heimdal:ppc64el (7.5.0+dfsg-3) ... Setting up libxcb-randr0-dev:ppc64el (1.13.1-2) ... Setting up libxt-dev:ppc64el (1:1.1.5-1) ... Setting up libxcb-present-dev:ppc64el (1.13.1-2) ... Setting up libgd-dev:ppc64el (2.2.5-5.2) ... Setting up imagemagick-6.q16 (8:6.9.10.23+dfsg-2.1ubuntu3) ... update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode Setting up libgdchart-gd2-noxpm-dev (0.11.5-10) ... Setting up mesa-common-dev:ppc64el (19.0.8-0ubuntu1) ... Setting up libglu1-mesa:ppc64el (9.0.0-2.1build1) ... Setting up libxdamage-dev:ppc64el (1:1.1.4-3) ... Setting up libfltk1.3:ppc64el (1.3.4-9ubuntu1) ... Setting up libfltk-gl1.3:ppc64el (1.3.4-9ubuntu1) ... Setting up libqt5gui5:ppc64el (5.12.2+dfsg-4ubuntu2) ... Setting up libldap-2.4-2:ppc64el (2.4.47+dfsg-3ubuntu2) ... Setting up libglvnd-dev:ppc64el (1.1.1-0ubuntu1) ... Setting up libcurl3-gnutls:ppc64el (7.64.0-4ubuntu1) ... Setting up libqt5widgets5:ppc64el (5.12.2+dfsg-4ubuntu2) ... Setting up libqt5help5:ppc64el (5.12.2-1) ... Setting up libgl2ps1.4 (1.4.0+dfsg1-2) ... Setting up liboctave6:ppc64el (4.4.1-6) ... Setting up libqt5printsupport5:ppc64el (5.12.2+dfsg-4ubuntu2) ... Setting up imagemagick (8:6.9.10.23+dfsg-2.1ubuntu3) ... Setting up libqscintilla2-qt5-13 (2.10.4+dfsg-1build2) ... Setting up libgl1-mesa-dev:ppc64el (19.0.8-0ubuntu1) ... Setting up libglu1-mesa-dev:ppc64el (9.0.0-2.1build1) ... Setting up octave (4.4.1-6) ... Setting up liboctave-dev (4.4.1-6) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up debhelper (12.1.1ubuntu1) ... Setting up sbuild-build-depends-fsl-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.29-0ubuntu2) ... Processing triggers for systemd (240-6ubuntu9) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-154-generic ppc64el (ppc64le) Toolchain package versions: binutils_2.32.51.20190614-0ubuntu1 dpkg-dev_1.19.6ubuntu1 g++-8_8.3.0-14ubuntu1 gcc-8_8.3.0-14ubuntu1 libc6-dev_2.29-0ubuntu2 libstdc++-8-dev_8.3.0-14ubuntu1 libstdc++6_9.1.0-4ubuntu1 linux-libc-dev_5.0.0-17.18 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.1 autoconf_2.69-11 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.2ubuntu3 base-passwd_3.5.46 bash_5.0-4ubuntu1 binutils_2.32.51.20190614-0ubuntu1 binutils-common_2.32.51.20190614-0ubuntu1 binutils-powerpc64le-linux-gnu_2.32.51.20190614-0ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.33.1-0.1ubuntu2 build-essential_12.6ubuntu1 bzip2_1.0.6-9 ca-certificates_20190110 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libxxf86vm-dev_1:1.1.4-1 libxxf86vm1_1:1.1.4-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_5.0.0-17.18 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu2 lsb-base_10.2019051400ubuntu1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17ubuntu3 mesa-common-dev_19.0.8-0ubuntu1 mount_2.33.1-0.1ubuntu2 multiarch-support_2.29-0ubuntu2 ncurses-base_6.1+20181013-2ubuntu2 ncurses-bin_6.1+20181013-2ubuntu2 octave_4.4.1-6 octave-common_4.4.1-6 openssl_1.1.1c-1ubuntu3 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu2 patch_2.7.6-3 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 pinentry-curses_1.1.0-2 pkg-config_0.29.1-0ubuntu3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu2 readline-common_8.0-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-fsl-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_240-6ubuntu9 systemd-sysv_240-6ubuntu9 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.93-8ubuntu1 tar_1.30+dfsg-6 tcl_8.6.9+1 tcl8.6_8.6.9+dfsg-2 tex-common_6.11 texinfo_6.5.0.dfsg.1-5 tzdata_2019a-1 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1ubuntu2 uuid-dev_2.33.1-0.1ubuntu2 x11-common_1:7.7+19ubuntu12 x11proto-core-dev_2018.4-4 x11proto-damage-dev_1:2018.4-4 x11proto-dev_2018.4-4 x11proto-fixes-dev_1:2018.4-4 x11proto-xext-dev_2018.4-4 x11proto-xf86vidmode-dev_2018.4-4 xkb-data_2.26-2ubuntu1 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu2 zlib1g-dev_1:1.2.11.dfsg-1ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Jan 15 17:18:16 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./fsl_5.0.8-6.dsc dpkg-source: info: extracting fsl in fsl-5.0.8 dpkg-source: info: unpacking fsl_5.0.8.orig.tar.gz dpkg-source: info: unpacking fsl_5.0.8-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying tcl_shell_spec dpkg-source: info: applying debian_webhelp dpkg-source: info: applying fix_bashisms dpkg-source: info: applying fix_fslexec dpkg-source: info: applying debian_sge dpkg-source: info: applying debian_build_cfg dpkg-source: info: applying up_longoptions= dpkg-source: info: applying kfreebsd_compat dpkg-source: info: applying up_in_compar dpkg-source: info: applying fix_overload.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-16969094 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-16969094 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-16969094 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package fsl dpkg-buildpackage: info: source version 5.0.8-6 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el fakeroot debian/rules clean # clean sed'ed files and intermediate rubbish for f in debian/templates/*; do\ rm -f debian/$(basename $f) ; \ done rm -f debian/fsl-core.preinst # versioned files rm -f debian/fsl-5.0-{core,gpu}.{1,desktop,dirs,install,links,lintian-overrides,manpages,menu,preinst,docs} # inject current FSL major version into all templates for f in debian/templates/*; do \ sed -e "s/#FSLMVERSION#/5.0/g" $f \ > debian/$(basename $f) ; \ done # renamed files that need to have a version-specific name for suffix in 1 desktop dirs install links lintian-overrides manpages menu docs; do \ for prefix in 'core' 'gpu'; do \ [ -f debian/fsl-$prefix.$suffix ] && \ mv debian/fsl-$prefix.$suffix debian/fsl-5.0-$prefix.$suffix || true ; \ done ; \ done # and rename the meta-package files for f in debian/meta.*; do \ target=$(basename $f); suffix=${target#*.} ; \ mv $f debian/fsl-core.$suffix; \ done LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/libprob distclean make[1]: Entering directory '/<>/extras/src/libprob' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/extras/src/libprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/libcprob distclean make[1]: Entering directory '/<>/extras/src/libcprob' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/extras/src/libcprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/cprob distclean make[1]: Entering directory '/<>/extras/src/cprob' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/extras/src/cprob' find extras/src -name '*.o' -delete LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/utils distclean make[1]: Entering directory '/<>/src/utils' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/utils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslio distclean make[1]: Entering directory '/<>/src/fslio' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/fslio' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/miscmaths distclean make[1]: Entering directory '/<>/src/miscmaths' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/miscmaths' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/newimage distclean make[1]: Entering directory '/<>/src/newimage' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot testprog skeletonapp make[1]: Leaving directory '/<>/src/newimage' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/libvis distclean make[1]: Entering directory '/<>/src/libvis' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot test make[1]: Leaving directory '/<>/src/libvis' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/first_lib distclean make[1]: Entering directory '/<>/src/first_lib' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/first_lib' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/meshclass distclean make[1]: Entering directory '/<>/src/meshclass' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot drawmesh selfintersection make[1]: Leaving directory '/<>/src/meshclass' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslvtkio distclean make[1]: Entering directory '/<>/src/fslvtkio' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/fslvtkio' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_tcl distclean make[1]: Entering directory '/<>/src/misc_tcl' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/misc_tcl' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/basisfield distclean make[1]: Entering directory '/<>/src/basisfield' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/basisfield' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/warpfns distclean make[1]: Entering directory '/<>/src/warpfns' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot test_NewimageCoord2NewimageCoord make[1]: Leaving directory '/<>/src/warpfns' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/bint distclean make[1]: Entering directory '/<>/src/bint' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot mean make[1]: Leaving directory '/<>/src/bint' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/shapeModel distclean make[1]: Entering directory '/<>/src/shapeModel' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/shapeModel' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/MVdisc distclean make[1]: Entering directory '/<>/src/MVdisc' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/MVdisc' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslsurface distclean make[1]: Entering directory '/<>/src/fslsurface' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot fslsurfacemaths make[1]: Leaving directory '/<>/src/fslsurface' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/libmeshutils distclean make[1]: Entering directory '/<>/src/libmeshutils' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /bin/rm -f /tmp/fslgrot run_mesh_utils ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[1]: Leaving directory '/<>/src/libmeshutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/avwutils distclean make[1]: Entering directory '/<>/src/avwutils' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot fslorient fslstats fslmerge fslpspec fslroi fslnvols fsl2ascii fslascii2img fslsplit fslcc fslinterleave fslhd fslcpgeom fslcreatehd fslcorrecthd fslmaths fslcomplex fslfft fslmeants fslslice fslswapdim_exe fslchfiletype_exe calc_grad_perc_dev fslsmoothfill fslselectvols make[1]: Leaving directory '/<>/src/avwutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/basil distclean make[1]: Entering directory '/<>/src/basil' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/basil' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/bet2 distclean make[1]: Entering directory '/<>/src/bet2' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot bet2 betsurf robustfov make[1]: Leaving directory '/<>/src/bet2' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/cluster distclean make[1]: Entering directory '/<>/src/cluster' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot smoothest cluster connectedcomp make[1]: Leaving directory '/<>/src/cluster' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fast4 distclean make[1]: Entering directory '/<>/src/fast4' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot fast make[1]: Leaving directory '/<>/src/fast4' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/feat5 distclean make[1]: Entering directory '/<>/src/feat5' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot cutoffcalc feat_model tsplot prewhiten generateConfounds popp pnm_evs make[1]: Leaving directory '/<>/src/feat5' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/film distclean make[1]: Entering directory '/<>/src/film' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot film_gls contrast_mgr ttoz ftoz ttologp make[1]: Leaving directory '/<>/src/film' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/filmbabe distclean make[1]: Entering directory '/<>/src/filmbabe' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot filmbabe halfcosbasis make[1]: Leaving directory '/<>/src/filmbabe' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/flirt distclean make[1]: Entering directory '/<>/src/flirt' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot flirt convert_xfm avscale rmsdiff std2imgcoord img2stdcoord img2imgcoord applyxfm4D pointflirt makerot midtrans make[1]: Leaving directory '/<>/src/flirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fabber distclean make[1]: Entering directory '/<>/src/fabber' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot fabber mvntool make[1]: Leaving directory '/<>/src/fabber' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/baycest distclean make[1]: Entering directory '/<>/src/baycest' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/baycest' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslvbm distclean make[1]: Entering directory '/<>/src/fslvbm' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/fslvbm' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/mcflirt distclean make[1]: Entering directory '/<>/src/mcflirt' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot mcflirt make[1]: Leaving directory '/<>/src/mcflirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/melodic distclean make[1]: Entering directory '/<>/src/melodic' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot fsl_glm fsl_sbca fsl_mvlm fsl_regfilt fsl_schurprod fsl_bwtf melodic fsl_sbca fsl_mvlm fsl_schurprod test make[1]: Leaving directory '/<>/src/melodic' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_c distclean make[1]: Entering directory '/<>/src/misc_c' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot whirlgif hist2prob morph_kernel ptoz tmpnam ztop make[1]: Leaving directory '/<>/src/misc_c' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/miscvis distclean make[1]: Entering directory '/<>/src/miscvis' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot slicer overlay fsl_tsplot fsl_boxplot fsl_histogram create_lut wpng pngappend make[1]: Leaving directory '/<>/src/miscvis' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/mm distclean make[1]: Entering directory '/<>/src/mm' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot mm make[1]: Leaving directory '/<>/src/mm' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/gps distclean make[1]: Entering directory '/<>/src/gps' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot gps make[1]: Leaving directory '/<>/src/gps' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/randomise distclean make[1]: Entering directory '/<>/src/randomise' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot randomise fdr unconfound make[1]: Leaving directory '/<>/src/randomise' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/siena distclean make[1]: Entering directory '/<>/src/siena' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot siena_diff groupttest surface_norm cylsamp make[1]: Leaving directory '/<>/src/siena' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/slicetimer distclean make[1]: Entering directory '/<>/src/slicetimer' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot slicetimer make[1]: Leaving directory '/<>/src/slicetimer' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/susan distclean make[1]: Entering directory '/<>/src/susan' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot susan make[1]: Leaving directory '/<>/src/susan' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/tbss distclean make[1]: Entering directory '/<>/src/tbss' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot distancemap tbss_skeleton swap_voxelwise swap_subjectwise make[1]: Leaving directory '/<>/src/tbss' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fnirt distclean make[1]: Entering directory '/<>/src/fnirt' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot fnirt new_invwarp make[1]: Leaving directory '/<>/src/fnirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fugue distclean make[1]: Entering directory '/<>/src/fugue' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot prelude fugue applywarp convertwarp sigloss invwarp_exe fnirtfileutils interpwarp make[1]: Leaving directory '/<>/src/fugue' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/asl_mfree distclean make[1]: Entering directory '/<>/src/asl_mfree' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot asl_mfree make[1]: Leaving directory '/<>/src/asl_mfree' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_scripts distclean make[1]: Entering directory '/<>/src/misc_scripts' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/misc_scripts' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fdt distclean make[1]: Entering directory '/<>/src/fdt' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot dtifit ccops medianfilter make_dyadic_vectors vecreg xfibres probtrackx pvmfit dtigen eddy_combine make[1]: Leaving directory '/<>/src/fdt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/first distclean make[1]: Entering directory '/<>/src/first' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot first first_utils first_mult_bcorr make[1]: Leaving directory '/<>/src/first' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/possum distclean make[1]: Entering directory '/<>/src/possum' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot possum spharm_rm signal2image pulse systemnoise possum_sum b0calc possum_matrix tcalc test_possum make[1]: Leaving directory '/<>/src/possum' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/sgeutils distclean make[1]: Entering directory '/<>/src/sgeutils' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot make[1]: Leaving directory '/<>/src/sgeutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/flameo distclean make[1]: Entering directory '/<>/src/flameo' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot flameo make[1]: Leaving directory '/<>/src/flameo' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/oxford_asl distclean make[1]: Entering directory '/<>/src/oxford_asl' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot asl_file make[1]: Leaving directory '/<>/src/oxford_asl' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/qboot distclean make[1]: Entering directory '/<>/src/qboot' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot qboot make[1]: Leaving directory '/<>/src/qboot' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/topup distclean make[1]: Entering directory '/<>/src/topup' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot topup applytopup make[1]: Leaving directory '/<>/src/topup' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/ptx2 distclean make[1]: Entering directory '/<>/src/ptx2' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot probtrackx2 surf2surf surf2volume surf_proj label2surf find_the_biggest proj_thresh make[1]: Leaving directory '/<>/src/ptx2' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/lesions distclean make[1]: Entering directory '/<>/src/lesions' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot lesion_filling make[1]: Leaving directory '/<>/src/lesions' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/eddy distclean make[1]: Entering directory '/<>/src/eddy' /bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk /bin/rm -f /tmp/fslgrot eddy test_bench make[1]: Leaving directory '/<>/src/eddy' dh_testdir dh_testroot # remove leftovers find /<> -name '*.so' -delete rm src/fdt/{xfibres,fdt_matrix_ops,indexer,replacevols,probtrackx,reord_OM,sausages,probtrack_old,xfibres_pred,rearrange} rm: cannot remove 'src/fdt/xfibres': No such file or directory rm: cannot remove 'src/fdt/fdt_matrix_ops': No such file or directory rm: cannot remove 'src/fdt/indexer': No such file or directory rm: cannot remove 'src/fdt/replacevols': No such file or directory rm: cannot remove 'src/fdt/probtrackx': No such file or directory rm: cannot remove 'src/fdt/reord_OM': No such file or directory rm: cannot remove 'src/fdt/sausages': No such file or directory rm: cannot remove 'src/fdt/probtrack_old': No such file or directory rm: cannot remove 'src/fdt/xfibres_pred': No such file or directory rm: cannot remove 'src/fdt/rearrange': No such file or directory make: [debian/rules:174: clean] Error 1 (ignored) rm src/feat5/doc/{top.html,feat.tcl} rm: cannot remove 'src/feat5/doc/top.html': No such file or directory rm: cannot remove 'src/feat5/doc/feat.tcl': No such file or directory make: [debian/rules:175: clean] Error 1 (ignored) rm -r etc/standard lib rm: cannot remove 'etc/standard': No such file or directory rm: cannot remove 'lib': No such file or directory make: [debian/rules:176: clean] Error 1 (ignored) # clean the remaining temp dir rm -rf include # finally clean package dh_clean # fix permissions in the source find src/ -name '*.fig' -or -name '*.gif' -exec chmod -x {} \; rm build-stamp rm: cannot remove 'build-stamp': No such file or directory make: [debian/rules:183: clean] Error 1 (ignored) debian/rules build-arch if [ ! -d /<>/debian/tmp ]; then mkdir -p /<>/debian/tmp; fi dh_installdirs LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/libprob make[1]: Entering directory '/<>/extras/src/libprob' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/extras/src/libprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/libprob install make[1]: Entering directory '/<>/extras/src/libprob' make[2]: Entering directory '/<>/extras/src/libprob' make[3]: Entering directory '/<>/extras/src/libprob' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/extras/src/libprob' make[3]: Entering directory '/<>/extras/src/libprob' make[4]: Entering directory '/<>/extras/src/libprob' Installing stable binaries make[4]: Leaving directory '/<>/extras/src/libprob' make[4]: Entering directory '/<>/extras/src/libprob' make[5]: Entering directory '/<>/extras/src/libprob' Installing stable header files install -p -m 0664 libprob.h /<>/include/libprob/ make[5]: Leaving directory '/<>/extras/src/libprob' make[5]: Entering directory '/<>/extras/src/libprob' Installing stable library archives make[5]: Leaving directory '/<>/extras/src/libprob' make[5]: Entering directory '/<>/extras/src/libprob' Installing tcl scripts make[5]: Leaving directory '/<>/extras/src/libprob' make[5]: Entering directory '/<>/extras/src/libprob' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/libprob/ make[5]: Leaving directory '/<>/extras/src/libprob' make[5]: Entering directory '/<>/extras/src/libprob' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/libprob/ make[5]: Leaving directory '/<>/extras/src/libprob' make[5]: Entering directory '/<>/extras/src/libprob' make[5]: Leaving directory '/<>/extras/src/libprob' make[4]: Leaving directory '/<>/extras/src/libprob' make[3]: Leaving directory '/<>/extras/src/libprob' make[2]: Leaving directory '/<>/extras/src/libprob' make[1]: Leaving directory '/<>/extras/src/libprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/libcprob make[1]: Entering directory '/<>/extras/src/libcprob' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/extras/src/libcprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/libcprob install make[1]: Entering directory '/<>/extras/src/libcprob' make[2]: Entering directory '/<>/extras/src/libcprob' make[3]: Entering directory '/<>/extras/src/libcprob' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/extras/src/libcprob' make[3]: Entering directory '/<>/extras/src/libcprob' make[4]: Entering directory '/<>/extras/src/libcprob' Installing stable binaries make[4]: Leaving directory '/<>/extras/src/libcprob' make[4]: Entering directory '/<>/extras/src/libcprob' make[5]: Entering directory '/<>/extras/src/libcprob' Installing stable header files install -p -m 0664 libcprob.h /<>/include/libcprob/ make[5]: Leaving directory '/<>/extras/src/libcprob' make[5]: Entering directory '/<>/extras/src/libcprob' Installing stable library archives make[5]: Leaving directory '/<>/extras/src/libcprob' make[5]: Entering directory '/<>/extras/src/libcprob' Installing tcl scripts make[5]: Leaving directory '/<>/extras/src/libcprob' make[5]: Entering directory '/<>/extras/src/libcprob' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/libcprob/ make[5]: Leaving directory '/<>/extras/src/libcprob' make[5]: Entering directory '/<>/extras/src/libcprob' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/libcprob/ make[5]: Leaving directory '/<>/extras/src/libcprob' make[5]: Entering directory '/<>/extras/src/libcprob' make[5]: Leaving directory '/<>/extras/src/libcprob' make[4]: Leaving directory '/<>/extras/src/libcprob' make[3]: Leaving directory '/<>/extras/src/libcprob' make[2]: Leaving directory '/<>/extras/src/libcprob' make[1]: Leaving directory '/<>/extras/src/libcprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/cprob make[1]: Entering directory '/<>/extras/src/cprob' gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o bdtr.o bdtr.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o btdtr.o btdtr.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o chdtr.o chdtr.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o drand.o drand.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o expx2.o expx2.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o fdtr.o fdtr.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o gamma.o gamma.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o gdtr.o gdtr.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o igam.o igam.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o igami.o igami.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o incbet.o incbet.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o incbi.o incbi.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o mtherr.o mtherr.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o nbdtr.o nbdtr.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o ndtr.o ndtr.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o ndtri.o ndtri.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o pdtr.o pdtr.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o stdtr.o stdtr.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o unity.o unity.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o polevl.o polevl.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o const.o const.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -std=gnu99 -I. -I/<>/include -I/<>/include -c -o xmath.o xmath.c g++ -shared -o libprob.so bdtr.o btdtr.o chdtr.o drand.o expx2.o fdtr.o gamma.o gdtr.o igam.o igami.o incbet.o incbi.o mtherr.o nbdtr.o ndtr.o ndtri.o pdtr.o stdtr.o unity.o polevl.o const.o xmath.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L. -L/<>/lib -L/<>/lib rm -f libcprob.so ln -s libprob.so libcprob.so make[1]: Leaving directory '/<>/extras/src/cprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/cprob install make[1]: Entering directory '/<>/extras/src/cprob' make[2]: Entering directory '/<>/extras/src/cprob' make[3]: Entering directory '/<>/extras/src/cprob' g++ -shared -o libprob.so bdtr.o btdtr.o chdtr.o drand.o expx2.o fdtr.o gamma.o gdtr.o igam.o igami.o incbet.o incbi.o mtherr.o nbdtr.o ndtr.o ndtri.o pdtr.o stdtr.o unity.o polevl.o const.o xmath.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L. -L/<>/lib -L/<>/lib rm -f libcprob.so ln -s libprob.so libcprob.so make[3]: Leaving directory '/<>/extras/src/cprob' make[3]: Entering directory '/<>/extras/src/cprob' make[4]: Entering directory '/<>/extras/src/cprob' Installing stable binaries make[4]: Leaving directory '/<>/extras/src/cprob' make[4]: Entering directory '/<>/extras/src/cprob' make[5]: Entering directory '/<>/extras/src/cprob' Installing stable header files install -p -m 0664 cprob.h /<>/include/cprob/ install -p -m 0664 mconf.h /<>/include/cprob/ install -p -m 0664 xmath.h /<>/include/cprob/ make[5]: Leaving directory '/<>/extras/src/cprob' make[5]: Entering directory '/<>/extras/src/cprob' Installing stable library archives install -p -m 0664 libcprob.so /<>/lib install -p -m 0664 libprob.so /<>/lib make[5]: Leaving directory '/<>/extras/src/cprob' make[5]: Entering directory '/<>/extras/src/cprob' Installing tcl scripts make[5]: Leaving directory '/<>/extras/src/cprob' make[5]: Entering directory '/<>/extras/src/cprob' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/cprob/ make[5]: Leaving directory '/<>/extras/src/cprob' make[5]: Entering directory '/<>/extras/src/cprob' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/cprob/ make[5]: Leaving directory '/<>/extras/src/cprob' make[5]: Entering directory '/<>/extras/src/cprob' make[5]: Leaving directory '/<>/extras/src/cprob' make[4]: Leaving directory '/<>/extras/src/cprob' make[3]: Leaving directory '/<>/extras/src/cprob' make[2]: Leaving directory '/<>/extras/src/cprob' make[1]: Leaving directory '/<>/extras/src/cprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/utils make[1]: Entering directory '/<>/src/utils' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -c -o matches.o matches.cc In file included from matches.cc:65: options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -c -o functions.o functions.cc In file included from functions.cc:65: options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -c -o usage.o usage.cc In file included from usage.cc:65: options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -c -o check.o check.cc In file included from check.cc:65: options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -c -o parse.o parse.cc In file included from parse.cc:66: options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ parse.cc:86:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError) ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -c -o log.o log.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -c -o time_tracer.o time_tracer.cc g++ -shared -o libutils.so matches.o functions.o usage.o check.o parse.o log.o time_tracer.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L. -L/<>/lib -L/<>/lib -fPIC -lnewmat make[1]: Leaving directory '/<>/src/utils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/utils install make[1]: Entering directory '/<>/src/utils' make[2]: Entering directory '/<>/src/utils' make[3]: Entering directory '/<>/src/utils' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/utils' make[3]: Entering directory '/<>/src/utils' make[4]: Entering directory '/<>/src/utils' Installing stable binaries make[4]: Leaving directory '/<>/src/utils' make[4]: Entering directory '/<>/src/utils' make[5]: Entering directory '/<>/src/utils' Installing stable header files install -p -m 0664 buildno.h /<>/include/utils/ install -p -m 0664 fsl_isfinite.h /<>/include/utils/ install -p -m 0664 log.h /<>/include/utils/ install -p -m 0664 options.h /<>/include/utils/ install -p -m 0664 stack_dump.h /<>/include/utils/ install -p -m 0664 time_tracer.h /<>/include/utils/ install -p -m 0664 tracer_plus.h /<>/include/utils/ make[5]: Leaving directory '/<>/src/utils' make[5]: Entering directory '/<>/src/utils' Installing stable library archives install -p -m 0664 libutils.so /<>/lib make[5]: Leaving directory '/<>/src/utils' make[5]: Entering directory '/<>/src/utils' Installing tcl scripts make[5]: Leaving directory '/<>/src/utils' make[5]: Entering directory '/<>/src/utils' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/utils/ make[5]: Leaving directory '/<>/src/utils' make[5]: Entering directory '/<>/src/utils' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/utils/ make[5]: Leaving directory '/<>/src/utils' make[5]: Entering directory '/<>/src/utils' make[5]: Leaving directory '/<>/src/utils' make[4]: Leaving directory '/<>/src/utils' make[3]: Leaving directory '/<>/src/utils' make[2]: Leaving directory '/<>/src/utils' make[1]: Leaving directory '/<>/src/utils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslio make[1]: Entering directory '/<>/src/fslio' gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslio.o fslio.c fslio.c: In function ‘fsl_fileexists’: fslio.c:512:11: warning: implicit declaration of function ‘nifti_fileexists’; did you mean ‘fsl_fileexists’? [-Wimplicit-function-declaration] return( nifti_fileexists(fname) ); ^~~~~~~~~~~~~~~~ fsl_fileexists g++ -shared -o libfslio.so fslio.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L. -L/<>/lib -L/<>/lib -lniftiio -lznz -lz make[1]: Leaving directory '/<>/src/fslio' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslio install make[1]: Entering directory '/<>/src/fslio' make[2]: Entering directory '/<>/src/fslio' make[3]: Entering directory '/<>/src/fslio' g++ -shared -o libfslio.so fslio.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L. -L/<>/lib -L/<>/lib -lniftiio -lznz -lz make[3]: Leaving directory '/<>/src/fslio' make[3]: Entering directory '/<>/src/fslio' make[4]: Entering directory '/<>/src/fslio' Installing stable binaries install -p -m 0775 remove_ext /<>/debian/tmp/bin/ install -p -m 0775 imtest /<>/debian/tmp/bin/ install -p -m 0775 imglob /<>/debian/tmp/bin/ install -p -m 0775 imcp /<>/debian/tmp/bin/ install -p -m 0775 imln /<>/debian/tmp/bin/ install -p -m 0775 imrm /<>/debian/tmp/bin/ install -p -m 0775 immv /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/fslio' make[4]: Entering directory '/<>/src/fslio' make[5]: Entering directory '/<>/src/fslio' Installing stable header files install -p -m 0664 dbh.h /<>/include/fslio/ install -p -m 0664 fslio.h /<>/include/fslio/ make[5]: Leaving directory '/<>/src/fslio' make[5]: Entering directory '/<>/src/fslio' Installing stable library archives install -p -m 0664 libfslio.so /<>/lib make[5]: Leaving directory '/<>/src/fslio' make[5]: Entering directory '/<>/src/fslio' Installing tcl scripts install -p -m 0775 fslio.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/fslio' make[5]: Entering directory '/<>/src/fslio' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fslio/ make[5]: Leaving directory '/<>/src/fslio' make[5]: Entering directory '/<>/src/fslio' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fslio/ make[5]: Leaving directory '/<>/src/fslio' make[5]: Entering directory '/<>/src/fslio' make[5]: Leaving directory '/<>/src/fslio' make[4]: Leaving directory '/<>/src/fslio' make[3]: Leaving directory '/<>/src/fslio' make[2]: Leaving directory '/<>/src/fslio' make[1]: Leaving directory '/<>/src/fslio' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/miscmaths make[1]: Entering directory '/<>/src/miscmaths' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o miscmaths.o miscmaths.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o optimise.o optimise.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o miscprob.o miscprob.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o kernel.o kernel.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o histogram.o histogram.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o base2z.o base2z.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o t2z.o t2z.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o f2z.o f2z.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o minimize.o minimize.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o cspline.o cspline.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o sparse_matrix.o sparse_matrix.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o sparsefn.o sparsefn.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o rungekutta.o rungekutta.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o nonlin.o nonlin.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/<>/extras/include/libprob -I. -I/<>/include -I/<>/include -c -o bfmatrix.o bfmatrix.cpp g++ -shared -o libmiscmaths.so miscmaths.o optimise.o miscprob.o kernel.o histogram.o base2z.o t2z.o f2z.o minimize.o cspline.o sparse_matrix.o sparsefn.o rungekutta.o nonlin.o bfmatrix.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L. -L/<>/lib -L/<>/lib -lnewmat -lutils -lfslio -lniftiio -lprob make[1]: Leaving directory '/<>/src/miscmaths' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/miscmaths install make[1]: Entering directory '/<>/src/miscmaths' make[2]: Entering directory '/<>/src/miscmaths' make[3]: Entering directory '/<>/src/miscmaths' g++ -shared -o libmiscmaths.so miscmaths.o optimise.o miscprob.o kernel.o histogram.o base2z.o t2z.o f2z.o minimize.o cspline.o sparse_matrix.o sparsefn.o rungekutta.o nonlin.o bfmatrix.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L. -L/<>/lib -L/<>/lib -lnewmat -lutils -lfslio -lniftiio -lprob make[3]: Leaving directory '/<>/src/miscmaths' make[3]: Entering directory '/<>/src/miscmaths' make[4]: Entering directory '/<>/src/miscmaths' Installing stable binaries make[4]: Leaving directory '/<>/src/miscmaths' make[4]: Entering directory '/<>/src/miscmaths' make[5]: Entering directory '/<>/src/miscmaths' Installing stable header files install -p -m 0664 SpMat.h /<>/include/miscmaths/ install -p -m 0664 base2z.h /<>/include/miscmaths/ install -p -m 0664 bfmatrix.h /<>/include/miscmaths/ install -p -m 0664 bicg.h /<>/include/miscmaths/ install -p -m 0664 bicgstab.h /<>/include/miscmaths/ install -p -m 0664 cg.h /<>/include/miscmaths/ install -p -m 0664 cgs.h /<>/include/miscmaths/ install -p -m 0664 cheby.h /<>/include/miscmaths/ install -p -m 0664 cspline.h /<>/include/miscmaths/ install -p -m 0664 f2z.h /<>/include/miscmaths/ install -p -m 0664 histogram.h /<>/include/miscmaths/ install -p -m 0664 ir.h /<>/include/miscmaths/ install -p -m 0664 kernel.h /<>/include/miscmaths/ install -p -m 0664 minimize.h /<>/include/miscmaths/ install -p -m 0664 miscmaths.h /<>/include/miscmaths/ install -p -m 0664 miscprob.h /<>/include/miscmaths/ install -p -m 0664 nonlin.h /<>/include/miscmaths/ install -p -m 0664 optimise.h /<>/include/miscmaths/ install -p -m 0664 qmr.h /<>/include/miscmaths/ install -p -m 0664 rungekutta.h /<>/include/miscmaths/ install -p -m 0664 sparse_matrix.h /<>/include/miscmaths/ install -p -m 0664 sparsefn.h /<>/include/miscmaths/ install -p -m 0664 splinterpolator.h /<>/include/miscmaths/ install -p -m 0664 t2z.h /<>/include/miscmaths/ make[5]: Leaving directory '/<>/src/miscmaths' make[5]: Entering directory '/<>/src/miscmaths' Installing stable library archives install -p -m 0664 libmiscmaths.so /<>/lib make[5]: Leaving directory '/<>/src/miscmaths' make[5]: Entering directory '/<>/src/miscmaths' Installing tcl scripts make[5]: Leaving directory '/<>/src/miscmaths' make[5]: Entering directory '/<>/src/miscmaths' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/miscmaths/ make[5]: Leaving directory '/<>/src/miscmaths' make[5]: Entering directory '/<>/src/miscmaths' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/miscmaths/ make[5]: Leaving directory '/<>/src/miscmaths' make[5]: Entering directory '/<>/src/miscmaths' make[5]: Leaving directory '/<>/src/miscmaths' make[4]: Leaving directory '/<>/src/miscmaths' make[3]: Leaving directory '/<>/src/miscmaths' make[2]: Leaving directory '/<>/src/miscmaths' make[1]: Leaving directory '/<>/src/miscmaths' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/newimage make[1]: Entering directory '/<>/src/newimage' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -DEXPOSE_TREACHEROUS -I. -I/<>/include -I/<>/include -c -o lazy.o lazy.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -DEXPOSE_TREACHEROUS -I. -I/<>/include -I/<>/include -c -o newimage.o newimage.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -DEXPOSE_TREACHEROUS -I. -I/<>/include -I/<>/include -c -o generalio.o generalio.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -DEXPOSE_TREACHEROUS -I. -I/<>/include -I/<>/include -c -o newimagefns.o newimagefns.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -DEXPOSE_TREACHEROUS -I. -I/<>/include -I/<>/include -c -o complexvolume.o complexvolume.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -DEXPOSE_TREACHEROUS -I. -I/<>/include -I/<>/include -c -o imfft.o imfft.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -DEXPOSE_TREACHEROUS -I. -I/<>/include -I/<>/include -c -o costfns.o costfns.cc g++ -shared -o libnewimage.so lazy.o newimage.o generalio.o newimagefns.o complexvolume.o imfft.o costfns.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lnewmat -lfslio -lmiscmaths -lniftiio make[1]: Leaving directory '/<>/src/newimage' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/newimage install make[1]: Entering directory '/<>/src/newimage' make[2]: Entering directory '/<>/src/newimage' make[3]: Entering directory '/<>/src/newimage' g++ -shared -o libnewimage.so lazy.o newimage.o generalio.o newimagefns.o complexvolume.o imfft.o costfns.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lnewmat -lfslio -lmiscmaths -lniftiio make[3]: Leaving directory '/<>/src/newimage' make[3]: Entering directory '/<>/src/newimage' make[4]: Entering directory '/<>/src/newimage' Installing stable binaries make[4]: Leaving directory '/<>/src/newimage' make[4]: Entering directory '/<>/src/newimage' make[5]: Entering directory '/<>/src/newimage' Installing stable header files install -p -m 0664 complexvolume.h /<>/include/newimage/ install -p -m 0664 costfns.h /<>/include/newimage/ install -p -m 0664 fmribmain.h /<>/include/newimage/ install -p -m 0664 fmribmain2.h /<>/include/newimage/ install -p -m 0664 imfft.h /<>/include/newimage/ install -p -m 0664 lazy.h /<>/include/newimage/ install -p -m 0664 lazyiterators.h /<>/include/newimage/ install -p -m 0664 newimage.h /<>/include/newimage/ install -p -m 0664 newimageall.h /<>/include/newimage/ install -p -m 0664 newimagefns.h /<>/include/newimage/ install -p -m 0664 newimageio.h /<>/include/newimage/ install -p -m 0664 positerators.h /<>/include/newimage/ make[5]: Leaving directory '/<>/src/newimage' make[5]: Entering directory '/<>/src/newimage' Installing stable library archives install -p -m 0664 libnewimage.so /<>/lib make[5]: Leaving directory '/<>/src/newimage' make[5]: Entering directory '/<>/src/newimage' Installing tcl scripts make[5]: Leaving directory '/<>/src/newimage' make[5]: Entering directory '/<>/src/newimage' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/newimage/ make[5]: Leaving directory '/<>/src/newimage' make[5]: Entering directory '/<>/src/newimage' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/newimage/ make[5]: Leaving directory '/<>/src/newimage' make[5]: Entering directory '/<>/src/newimage' make[5]: Leaving directory '/<>/src/newimage' make[4]: Leaving directory '/<>/src/newimage' make[3]: Leaving directory '/<>/src/newimage' make[2]: Leaving directory '/<>/src/newimage' make[1]: Leaving directory '/<>/src/newimage' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/libvis make[1]: Entering directory '/<>/src/libvis' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I/usr/include/boost -fPIC -I. -I/<>/include -I/<>/include -std=c++98 -c -o miscplot.o miscplot.cc g++ -shared -o libmiscplot.so miscplot.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewmat -lgd -lgdc -lmiscmaths -lfslio -lprob -lniftiio g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I/usr/include/boost -fPIC -I. -I/<>/include -I/<>/include -std=c++98 -c -o miscpic.o miscpic.cc g++ -shared -o libmiscpic.so miscpic.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewimage -lgd -lfslio -lmiscmaths -lnewmat -lniftiio make[1]: Leaving directory '/<>/src/libvis' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/libvis install make[1]: Entering directory '/<>/src/libvis' make[2]: Entering directory '/<>/src/libvis' make[3]: Entering directory '/<>/src/libvis' g++ -shared -o libmiscplot.so miscplot.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewmat -lgd -lgdc -lmiscmaths -lfslio -lprob -lniftiio g++ -shared -o libmiscpic.so miscpic.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewimage -lgd -lfslio -lmiscmaths -lnewmat -lniftiio make[3]: Leaving directory '/<>/src/libvis' make[3]: Entering directory '/<>/src/libvis' make[4]: Entering directory '/<>/src/libvis' Installing stable binaries make[4]: Leaving directory '/<>/src/libvis' make[4]: Entering directory '/<>/src/libvis' make[5]: Entering directory '/<>/src/libvis' Installing stable header files install -p -m 0664 miscpic.h /<>/include/libvis/ install -p -m 0664 miscplot.h /<>/include/libvis/ make[5]: Leaving directory '/<>/src/libvis' make[5]: Entering directory '/<>/src/libvis' Installing stable library archives install -p -m 0664 libmiscpic.so /<>/lib install -p -m 0664 libmiscplot.so /<>/lib make[5]: Leaving directory '/<>/src/libvis' make[5]: Entering directory '/<>/src/libvis' Installing tcl scripts make[5]: Leaving directory '/<>/src/libvis' make[5]: Entering directory '/<>/src/libvis' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/libvis/ make[5]: Leaving directory '/<>/src/libvis' make[5]: Entering directory '/<>/src/libvis' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/libvis/ make[5]: Leaving directory '/<>/src/libvis' make[5]: Entering directory '/<>/src/libvis' make[5]: Leaving directory '/<>/src/libvis' make[4]: Leaving directory '/<>/src/libvis' make[3]: Leaving directory '/<>/src/libvis' make[2]: Leaving directory '/<>/src/libvis' make[1]: Leaving directory '/<>/src/libvis' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/first_lib make[1]: Entering directory '/<>/src/first_lib' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -c -o first_mesh.o first_mesh.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -c -o first_newmat_vec.o first_newmat_vec.cpp ar -r libfirst_lib.a first_mesh.o first_newmat_vec.o ar: creating libfirst_lib.a make[1]: Leaving directory '/<>/src/first_lib' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/first_lib install make[1]: Entering directory '/<>/src/first_lib' make[2]: Entering directory '/<>/src/first_lib' make[3]: Entering directory '/<>/src/first_lib' ar -r libfirst_lib.a first_mesh.o first_newmat_vec.o make[3]: Leaving directory '/<>/src/first_lib' make[3]: Entering directory '/<>/src/first_lib' make[4]: Entering directory '/<>/src/first_lib' Installing stable binaries make[4]: Leaving directory '/<>/src/first_lib' make[4]: Entering directory '/<>/src/first_lib' make[5]: Entering directory '/<>/src/first_lib' Installing stable header files install -p -m 0664 first_mesh.h /<>/include/first_lib/ install -p -m 0664 first_newmat_vec.h /<>/include/first_lib/ make[5]: Leaving directory '/<>/src/first_lib' make[5]: Entering directory '/<>/src/first_lib' Installing stable library archives install -p -m 0664 libfirst_lib.a /<>/lib make[5]: Leaving directory '/<>/src/first_lib' make[5]: Entering directory '/<>/src/first_lib' Installing tcl scripts make[5]: Leaving directory '/<>/src/first_lib' make[5]: Entering directory '/<>/src/first_lib' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/first_lib/ make[5]: Leaving directory '/<>/src/first_lib' make[5]: Entering directory '/<>/src/first_lib' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/first_lib/ make[5]: Leaving directory '/<>/src/first_lib' make[5]: Entering directory '/<>/src/first_lib' make[5]: Leaving directory '/<>/src/first_lib' make[4]: Leaving directory '/<>/src/first_lib' make[3]: Leaving directory '/<>/src/first_lib' make[2]: Leaving directory '/<>/src/first_lib' make[1]: Leaving directory '/<>/src/first_lib' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/meshclass make[1]: Entering directory '/<>/src/meshclass' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -g -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o point.o point.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -g -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o mpoint.o mpoint.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -g -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o triangle.o triangle.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -g -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o mesh.o mesh.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -g -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o pt_special.o pt_special.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -g -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o profile.o profile.cpp g++ -shared -o libmeshclass.so point.o mpoint.o triangle.o mesh.o pt_special.o profile.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -g -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o drawmesh.o drawmesh.cpp In file included from drawmesh.cpp:72: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -g -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o drawmesh drawmesh.o mpoint.o triangle.o mesh.o point.o pt_special.o -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -g -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o selfintersection.o selfintersection.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -g -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o selfintersection selfintersection.o mpoint.o triangle.o mesh.o point.o pt_special.o -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz make[1]: Leaving directory '/<>/src/meshclass' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/meshclass install make[1]: Entering directory '/<>/src/meshclass' make[2]: Entering directory '/<>/src/meshclass' make[3]: Entering directory '/<>/src/meshclass' g++ -shared -o libmeshclass.so point.o mpoint.o triangle.o mesh.o pt_special.o profile.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC make[3]: Leaving directory '/<>/src/meshclass' make[3]: Entering directory '/<>/src/meshclass' make[4]: Entering directory '/<>/src/meshclass' Installing stable binaries install -p -m 0775 drawmesh /<>/debian/tmp/bin/ install -p -m 0775 selfintersection /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/meshclass' make[4]: Entering directory '/<>/src/meshclass' make[5]: Entering directory '/<>/src/meshclass' Installing stable header files install -p -m 0664 mesh.h /<>/include/meshclass/ install -p -m 0664 meshclass.h /<>/include/meshclass/ install -p -m 0664 mpoint.h /<>/include/meshclass/ install -p -m 0664 point.h /<>/include/meshclass/ install -p -m 0664 profile.h /<>/include/meshclass/ install -p -m 0664 pt_special.h /<>/include/meshclass/ install -p -m 0664 triangle.h /<>/include/meshclass/ make[5]: Leaving directory '/<>/src/meshclass' make[5]: Entering directory '/<>/src/meshclass' Installing stable library archives install -p -m 0664 libmeshclass.so /<>/lib make[5]: Leaving directory '/<>/src/meshclass' make[5]: Entering directory '/<>/src/meshclass' Installing tcl scripts make[5]: Leaving directory '/<>/src/meshclass' make[5]: Entering directory '/<>/src/meshclass' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/meshclass/ make[5]: Leaving directory '/<>/src/meshclass' make[5]: Entering directory '/<>/src/meshclass' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/meshclass/ make[5]: Leaving directory '/<>/src/meshclass' make[5]: Entering directory '/<>/src/meshclass' make[5]: Leaving directory '/<>/src/meshclass' make[4]: Leaving directory '/<>/src/meshclass' make[3]: Leaving directory '/<>/src/meshclass' make[2]: Leaving directory '/<>/src/meshclass' make[1]: Leaving directory '/<>/src/meshclass' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslvtkio make[1]: Entering directory '/<>/src/fslvtkio' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/sbuild-nonexistent/fsldev/lib -I. -I/<>/include -I/<>/include -c -o fslvtkio.o fslvtkio.cc g++ -shared -o libfslvtkio.so fslvtkio.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz make[1]: Leaving directory '/<>/src/fslvtkio' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslvtkio install make[1]: Entering directory '/<>/src/fslvtkio' make[2]: Entering directory '/<>/src/fslvtkio' make[3]: Entering directory '/<>/src/fslvtkio' g++ -shared -o libfslvtkio.so fslvtkio.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz make[3]: Leaving directory '/<>/src/fslvtkio' make[3]: Entering directory '/<>/src/fslvtkio' make[4]: Entering directory '/<>/src/fslvtkio' Installing stable binaries make[4]: Leaving directory '/<>/src/fslvtkio' make[4]: Entering directory '/<>/src/fslvtkio' make[5]: Entering directory '/<>/src/fslvtkio' Installing stable header files install -p -m 0664 fslvtkio.h /<>/include/fslvtkio/ make[5]: Leaving directory '/<>/src/fslvtkio' make[5]: Entering directory '/<>/src/fslvtkio' Installing stable library archives install -p -m 0664 libfslvtkio.so /<>/lib make[5]: Leaving directory '/<>/src/fslvtkio' make[5]: Entering directory '/<>/src/fslvtkio' Installing tcl scripts make[5]: Leaving directory '/<>/src/fslvtkio' make[5]: Entering directory '/<>/src/fslvtkio' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fslvtkio/ make[5]: Leaving directory '/<>/src/fslvtkio' make[5]: Entering directory '/<>/src/fslvtkio' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fslvtkio/ make[5]: Leaving directory '/<>/src/fslvtkio' make[5]: Entering directory '/<>/src/fslvtkio' make[5]: Leaving directory '/<>/src/fslvtkio' make[4]: Leaving directory '/<>/src/fslvtkio' make[3]: Leaving directory '/<>/src/fslvtkio' make[2]: Leaving directory '/<>/src/fslvtkio' make[1]: Leaving directory '/<>/src/fslvtkio' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_tcl make[1]: Entering directory '/<>/src/misc_tcl' install -p -m 0775 Runtcl /<>/debian/tmp/bin ; \ /bin/cp -r BWidget /<>/debian/tmp/tcl/ ; \ cd /<>/debian/tmp/bin ; \ /bin/rm -f fsl fsl_gui ; \ ln -s Runtcl fsl ; \ ln -s Runtcl fsl_gui make[1]: Leaving directory '/<>/src/misc_tcl' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_tcl install make[1]: Entering directory '/<>/src/misc_tcl' make[2]: Entering directory '/<>/src/misc_tcl' make[3]: Entering directory '/<>/src/misc_tcl' install -p -m 0775 Runtcl /<>/debian/tmp/bin ; \ /bin/cp -r BWidget /<>/debian/tmp/tcl/ ; \ cd /<>/debian/tmp/bin ; \ /bin/rm -f fsl fsl_gui ; \ ln -s Runtcl fsl ; \ ln -s Runtcl fsl_gui make[3]: Leaving directory '/<>/src/misc_tcl' make[3]: Entering directory '/<>/src/misc_tcl' make[4]: Entering directory '/<>/src/misc_tcl' Installing stable binaries make[4]: Leaving directory '/<>/src/misc_tcl' make[4]: Entering directory '/<>/src/misc_tcl' make[5]: Entering directory '/<>/src/misc_tcl' Installing stable header files make[5]: Leaving directory '/<>/src/misc_tcl' make[5]: Entering directory '/<>/src/misc_tcl' Installing stable library archives make[5]: Leaving directory '/<>/src/misc_tcl' make[5]: Entering directory '/<>/src/misc_tcl' Installing tcl scripts install -p -m 0775 TkWidgets.tcl /<>/debian/tmp/tcl/ install -p -m 0775 balloon.tcl /<>/debian/tmp/tcl/ install -p -m 0775 collapsible.tcl /<>/debian/tmp/tcl/ install -p -m 0775 fix_cygwin_filename.tcl /<>/debian/tmp/tcl/ install -p -m 0775 fsl.tcl /<>/debian/tmp/tcl/ install -p -m 0775 fsl_exec.tcl /<>/debian/tmp/tcl/ install -p -m 0775 fsl_file.tcl /<>/debian/tmp/tcl/ install -p -m 0775 fsl_filelv.tcl /<>/debian/tmp/tcl/ install -p -m 0775 fslstart.tcl /<>/debian/tmp/tcl/ install -p -m 0775 misc_func.tcl /<>/debian/tmp/tcl/ install -p -m 0775 new_filename.tcl /<>/debian/tmp/tcl/ install -p -m 0775 webhelp.tcl /<>/debian/tmp/tcl/ install -p -m 0775 arrow.xbm /<>/debian/tmp/tcl/ install -p -m 0775 file.xbm /<>/debian/tmp/tcl/ install -p -m 0775 filltriangled.xbm /<>/debian/tmp/tcl/ install -p -m 0775 fmrib.xbm /<>/debian/tmp/tcl/ install -p -m 0775 triangled.xbm /<>/debian/tmp/tcl/ install -p -m 0775 triangler.xbm /<>/debian/tmp/tcl/ install -p -m 0775 fsl-logo-tiny.ppm /<>/debian/tmp/tcl/ install -p -m 0775 fsl-logo-tiny.ico /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/misc_tcl' make[5]: Entering directory '/<>/src/misc_tcl' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/misc_tcl/ make[5]: Leaving directory '/<>/src/misc_tcl' make[5]: Entering directory '/<>/src/misc_tcl' Installing reference documents /bin/cp -R -f refdoc/FSLFileEntry.html /<>/debian/tmp/refdoc/misc_tcl/ /bin/cp -R -f refdoc/FSLFileEntry.xml /<>/debian/tmp/refdoc/misc_tcl/ /bin/chmod -R ug+w /<>/debian/tmp/refdoc/misc_tcl/ make[5]: Leaving directory '/<>/src/misc_tcl' make[5]: Entering directory '/<>/src/misc_tcl' make[5]: Leaving directory '/<>/src/misc_tcl' make[4]: Leaving directory '/<>/src/misc_tcl' make[3]: Leaving directory '/<>/src/misc_tcl' make[2]: Leaving directory '/<>/src/misc_tcl' make[1]: Leaving directory '/<>/src/misc_tcl' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/basisfield make[1]: Entering directory '/<>/src/basisfield' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o dctfield.o dctfield.cpp dctfield.cpp: In member function ‘virtual boost::shared_ptr BASISFIELD::dctfield::ZoomField(const std::vector&, const std::vector >&, std::vector) const’: dctfield.cpp:359:28: warning: narrowing conversion of ‘((const BASISFIELD::dctfield*)this)->BASISFIELD::dctfield::CoefSz_x()’ from ‘unsigned int’ to ‘int’ inside { } [-Wnarrowing] int oorder[3] = {CoefSz_x(), CoefSz_y(), CoefSz_z()}; ~~~~~~~~^~ dctfield.cpp:359:40: warning: narrowing conversion of ‘((const BASISFIELD::dctfield*)this)->BASISFIELD::dctfield::CoefSz_y()’ from ‘unsigned int’ to ‘int’ inside { } [-Wnarrowing] int oorder[3] = {CoefSz_x(), CoefSz_y(), CoefSz_z()}; ~~~~~~~~^~ dctfield.cpp:359:52: warning: narrowing conversion of ‘((const BASISFIELD::dctfield*)this)->BASISFIELD::dctfield::CoefSz_z()’ from ‘unsigned int’ to ‘int’ inside { } [-Wnarrowing] int oorder[3] = {CoefSz_x(), CoefSz_y(), CoefSz_z()}; ~~~~~~~~^~ dctfield.cpp: In member function ‘void BASISFIELD::dctfield::memen_H(NEWMAT::DiagonalMatrix&) const’: dctfield.cpp:669:26: warning: narrowing conversion of ‘((const BASISFIELD::dctfield*)this)->BASISFIELD::dctfield::CoefSz_x()’ from ‘unsigned int’ to ‘int’ inside { } [-Wnarrowing] int csz[] = {CoefSz_x(), CoefSz_y(), CoefSz_z()}; ~~~~~~~~^~ dctfield.cpp:669:38: warning: narrowing conversion of ‘((const BASISFIELD::dctfield*)this)->BASISFIELD::dctfield::CoefSz_y()’ from ‘unsigned int’ to ‘int’ inside { } [-Wnarrowing] int csz[] = {CoefSz_x(), CoefSz_y(), CoefSz_z()}; ~~~~~~~~^~ dctfield.cpp:669:50: warning: narrowing conversion of ‘((const BASISFIELD::dctfield*)this)->BASISFIELD::dctfield::CoefSz_z()’ from ‘unsigned int’ to ‘int’ inside { } [-Wnarrowing] int csz[] = {CoefSz_x(), CoefSz_y(), CoefSz_z()}; ~~~~~~~~^~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o splinefield.o splinefield.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o basisfield.o basisfield.cpp gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o splines.o splines.c ar -r libbasisfield.a dctfield.o splinefield.o basisfield.o splines.o ar: creating libbasisfield.a ranlib libbasisfield.a make[1]: Leaving directory '/<>/src/basisfield' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/basisfield install make[1]: Entering directory '/<>/src/basisfield' make[2]: Entering directory '/<>/src/basisfield' make[3]: Entering directory '/<>/src/basisfield' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/basisfield' make[3]: Entering directory '/<>/src/basisfield' make[4]: Entering directory '/<>/src/basisfield' Installing stable binaries make[4]: Leaving directory '/<>/src/basisfield' make[4]: Entering directory '/<>/src/basisfield' make[5]: Entering directory '/<>/src/basisfield' Installing stable header files install -p -m 0664 basisfield.h /<>/include/basisfield/ install -p -m 0664 dctfield.h /<>/include/basisfield/ install -p -m 0664 fsl_splines.h /<>/include/basisfield/ install -p -m 0664 splinefield.h /<>/include/basisfield/ install -p -m 0664 splines.h /<>/include/basisfield/ make[5]: Leaving directory '/<>/src/basisfield' make[5]: Entering directory '/<>/src/basisfield' Installing stable library archives install -p -m 0664 libbasisfield.a /<>/lib make[5]: Leaving directory '/<>/src/basisfield' make[5]: Entering directory '/<>/src/basisfield' Installing tcl scripts make[5]: Leaving directory '/<>/src/basisfield' make[5]: Entering directory '/<>/src/basisfield' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/basisfield/ make[5]: Leaving directory '/<>/src/basisfield' make[5]: Entering directory '/<>/src/basisfield' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/basisfield/ make[5]: Leaving directory '/<>/src/basisfield' make[5]: Entering directory '/<>/src/basisfield' make[5]: Leaving directory '/<>/src/basisfield' make[4]: Leaving directory '/<>/src/basisfield' make[3]: Leaving directory '/<>/src/basisfield' make[2]: Leaving directory '/<>/src/basisfield' make[1]: Leaving directory '/<>/src/basisfield' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/warpfns make[1]: Entering directory '/<>/src/warpfns' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o warpfns.o warpfns.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o fnirt_file_reader.o fnirt_file_reader.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o fnirt_file_writer.o fnirt_file_writer.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o point_list.o point_list.cpp ar -r libwarpfns.a warpfns.o fnirt_file_reader.o fnirt_file_writer.o point_list.o ar: creating libwarpfns.a ranlib libwarpfns.a make[1]: Leaving directory '/<>/src/warpfns' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/warpfns install make[1]: Entering directory '/<>/src/warpfns' make[2]: Entering directory '/<>/src/warpfns' make[3]: Entering directory '/<>/src/warpfns' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/warpfns' make[3]: Entering directory '/<>/src/warpfns' make[4]: Entering directory '/<>/src/warpfns' Installing stable binaries make[4]: Leaving directory '/<>/src/warpfns' make[4]: Entering directory '/<>/src/warpfns' make[5]: Entering directory '/<>/src/warpfns' Installing stable header files install -p -m 0664 fnirt_file_reader.h /<>/include/warpfns/ install -p -m 0664 fnirt_file_writer.h /<>/include/warpfns/ install -p -m 0664 point_list.h /<>/include/warpfns/ install -p -m 0664 warpfns.h /<>/include/warpfns/ make[5]: Leaving directory '/<>/src/warpfns' make[5]: Entering directory '/<>/src/warpfns' Installing stable library archives install -p -m 0664 libwarpfns.a /<>/lib make[5]: Leaving directory '/<>/src/warpfns' make[5]: Entering directory '/<>/src/warpfns' Installing tcl scripts make[5]: Leaving directory '/<>/src/warpfns' make[5]: Entering directory '/<>/src/warpfns' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/warpfns/ make[5]: Leaving directory '/<>/src/warpfns' make[5]: Entering directory '/<>/src/warpfns' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/warpfns/ make[5]: Leaving directory '/<>/src/warpfns' make[5]: Entering directory '/<>/src/warpfns' make[5]: Leaving directory '/<>/src/warpfns' make[4]: Leaving directory '/<>/src/warpfns' make[3]: Leaving directory '/<>/src/warpfns' make[2]: Leaving directory '/<>/src/warpfns' make[1]: Leaving directory '/<>/src/warpfns' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/bint make[1]: Entering directory '/<>/src/bint' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o model.o model.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o lsmcmcmanager.o lsmcmcmanager.cc In file included from bintoptions.h:77, from lsmcmcmanager.h:78, from lsmcmcmanager.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o lslaplacemanager.o lslaplacemanager.cc In file included from bintoptions.h:77, from lslaplacemanager.h:79, from lslaplacemanager.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o bintoptions.o bintoptions.cc In file included from bintoptions.h:77, from bintoptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o meanoptions.o meanoptions.cc In file included from meanoptions.h:77, from meanoptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o mean.o mean.cc In file included from meanoptions.h:77, from mean.cc:78: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o mean model.o lsmcmcmanager.o lslaplacemanager.o bintoptions.o meanoptions.o mean.o -lutils -lnewimage -lmiscmaths -lm -lnewmat -lfslio -lniftiio -lznz -lprob -lz ar -r libbint.a model.o lsmcmcmanager.o lslaplacemanager.o bintoptions.o meanoptions.o ar: creating libbint.a make[1]: Leaving directory '/<>/src/bint' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/bint install make[1]: Entering directory '/<>/src/bint' make[2]: Entering directory '/<>/src/bint' make[3]: Entering directory '/<>/src/bint' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/bint' make[3]: Entering directory '/<>/src/bint' make[4]: Entering directory '/<>/src/bint' Installing stable binaries install -p -m 0775 mean /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/bint' make[4]: Entering directory '/<>/src/bint' make[5]: Entering directory '/<>/src/bint' Installing stable header files install -p -m 0664 bintoptions.h /<>/include/bint/ install -p -m 0664 lslaplacemanager.h /<>/include/bint/ install -p -m 0664 lsmcmcmanager.h /<>/include/bint/ install -p -m 0664 meanoptions.h /<>/include/bint/ install -p -m 0664 model.h /<>/include/bint/ make[5]: Leaving directory '/<>/src/bint' make[5]: Entering directory '/<>/src/bint' Installing stable library archives install -p -m 0664 libbint.a /<>/lib make[5]: Leaving directory '/<>/src/bint' make[5]: Entering directory '/<>/src/bint' Installing tcl scripts make[5]: Leaving directory '/<>/src/bint' make[5]: Entering directory '/<>/src/bint' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/bint/ make[5]: Leaving directory '/<>/src/bint' make[5]: Entering directory '/<>/src/bint' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/bint/ make[5]: Leaving directory '/<>/src/bint' make[5]: Entering directory '/<>/src/bint' make[5]: Leaving directory '/<>/src/bint' make[4]: Leaving directory '/<>/src/bint' make[3]: Leaving directory '/<>/src/bint' make[2]: Leaving directory '/<>/src/bint' make[1]: Leaving directory '/<>/src/bint' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/shapeModel make[1]: Entering directory '/<>/src/shapeModel' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -c -o shapeModel.o shapeModel.cc g++ -shared -o libshapeModel.so shapeModel.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lmeshclass -lnewimage -lnewmat -lfirst_lib -lfslvtkio -lmiscmaths make[1]: Leaving directory '/<>/src/shapeModel' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/shapeModel install make[1]: Entering directory '/<>/src/shapeModel' make[2]: Entering directory '/<>/src/shapeModel' make[3]: Entering directory '/<>/src/shapeModel' g++ -shared -o libshapeModel.so shapeModel.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lmeshclass -lnewimage -lnewmat -lfirst_lib -lfslvtkio -lmiscmaths make[3]: Leaving directory '/<>/src/shapeModel' make[3]: Entering directory '/<>/src/shapeModel' make[4]: Entering directory '/<>/src/shapeModel' Installing stable binaries make[4]: Leaving directory '/<>/src/shapeModel' make[4]: Entering directory '/<>/src/shapeModel' make[5]: Entering directory '/<>/src/shapeModel' Installing stable header files install -p -m 0664 shapeModel.h /<>/include/shapeModel/ make[5]: Leaving directory '/<>/src/shapeModel' make[5]: Entering directory '/<>/src/shapeModel' Installing stable library archives install -p -m 0664 libshapeModel.so /<>/lib make[5]: Leaving directory '/<>/src/shapeModel' make[5]: Entering directory '/<>/src/shapeModel' Installing tcl scripts make[5]: Leaving directory '/<>/src/shapeModel' make[5]: Entering directory '/<>/src/shapeModel' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/shapeModel/ make[5]: Leaving directory '/<>/src/shapeModel' make[5]: Entering directory '/<>/src/shapeModel' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/shapeModel/ make[5]: Leaving directory '/<>/src/shapeModel' make[5]: Entering directory '/<>/src/shapeModel' make[5]: Leaving directory '/<>/src/shapeModel' make[4]: Leaving directory '/<>/src/shapeModel' make[3]: Leaving directory '/<>/src/shapeModel' make[2]: Leaving directory '/<>/src/shapeModel' make[1]: Leaving directory '/<>/src/shapeModel' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/MVdisc make[1]: Entering directory '/<>/src/MVdisc' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -c -o MVdisc.o MVdisc.cc ar -r libMVdisc.a MVdisc.o ar: creating libMVdisc.a make[1]: Leaving directory '/<>/src/MVdisc' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/MVdisc install make[1]: Entering directory '/<>/src/MVdisc' make[2]: Entering directory '/<>/src/MVdisc' make[3]: Entering directory '/<>/src/MVdisc' ar -r libMVdisc.a MVdisc.o make[3]: Leaving directory '/<>/src/MVdisc' make[3]: Entering directory '/<>/src/MVdisc' make[4]: Entering directory '/<>/src/MVdisc' Installing stable binaries make[4]: Leaving directory '/<>/src/MVdisc' make[4]: Entering directory '/<>/src/MVdisc' make[5]: Entering directory '/<>/src/MVdisc' Installing stable header files install -p -m 0664 MVdisc.h /<>/include/MVdisc/ make[5]: Leaving directory '/<>/src/MVdisc' make[5]: Entering directory '/<>/src/MVdisc' Installing stable library archives install -p -m 0664 libMVdisc.a /<>/lib make[5]: Leaving directory '/<>/src/MVdisc' make[5]: Entering directory '/<>/src/MVdisc' Installing tcl scripts make[5]: Leaving directory '/<>/src/MVdisc' make[5]: Entering directory '/<>/src/MVdisc' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/MVdisc/ make[5]: Leaving directory '/<>/src/MVdisc' make[5]: Entering directory '/<>/src/MVdisc' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/MVdisc/ make[5]: Leaving directory '/<>/src/MVdisc' make[5]: Entering directory '/<>/src/MVdisc' make[5]: Leaving directory '/<>/src/MVdisc' make[4]: Leaving directory '/<>/src/MVdisc' make[3]: Leaving directory '/<>/src/MVdisc' make[2]: Leaving directory '/<>/src/MVdisc' make[1]: Leaving directory '/<>/src/MVdisc' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslsurface make[1]: Entering directory '/<>/src/fslsurface' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/<>/include/niftiio -I. -I/<>/include -I/<>/include -c -o fslsurfacefns.o fslsurfacefns.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/<>/include/niftiio -I. -I/<>/include -I/<>/include -c -o fslsurfaceio.o fslsurfaceio.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/<>/include/niftiio -I. -I/<>/include -I/<>/include -c -o fslsurface.o fslsurface.cc ar -r libfslsurface.a fslsurfacefns.o fslsurfaceio.o fslsurface.o ar: creating libfslsurface.a g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/<>/include/niftiio -I. -I/<>/include -I/<>/include -c -o fslsurface_first.o fslsurface_first.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/<>/include/niftiio -I. -I/<>/include -I/<>/include -c -o fslsurface_dataconv.o fslsurface_dataconv.cpp ar -r libfslsurface_backcompat.a fslsurface_first.o fslsurface_dataconv.o ar: creating libfslsurface_backcompat.a g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/<>/include/niftiio -I. -I/<>/include -I/<>/include -c -o fslsurfacemaths.o fslsurfacemaths.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/<>/include/niftiio -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslsurfacemaths fslsurfacemaths.o fslsurfaceio.o fslsurfacefns.o fslsurface_first.o fslsurface.o -lgiftiio -lexpat -lfirst_lib -lmeshclass -lshapeModel -lfslvtkio -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lprob -lz -lGL -lGLU make[1]: Leaving directory '/<>/src/fslsurface' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslsurface install make[1]: Entering directory '/<>/src/fslsurface' make[2]: Entering directory '/<>/src/fslsurface' make[3]: Entering directory '/<>/src/fslsurface' ar -r libfslsurface.a fslsurfacefns.o fslsurfaceio.o fslsurface.o ar -r libfslsurface_backcompat.a fslsurface_first.o fslsurface_dataconv.o g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/<>/include/niftiio -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslsurfacemaths fslsurfacemaths.o fslsurfaceio.o fslsurfacefns.o fslsurface_first.o fslsurface.o -lgiftiio -lexpat -lfirst_lib -lmeshclass -lshapeModel -lfslvtkio -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lprob -lz -lGL -lGLU make[3]: Leaving directory '/<>/src/fslsurface' make[3]: Entering directory '/<>/src/fslsurface' make[4]: Entering directory '/<>/src/fslsurface' Installing stable binaries install -p -m 0775 fslsurfacemaths /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/fslsurface' make[4]: Entering directory '/<>/src/fslsurface' make[5]: Entering directory '/<>/src/fslsurface' Installing stable header files install -p -m 0664 fslsurface.h /<>/include/fslsurface/ install -p -m 0664 fslsurface_dataconv.h /<>/include/fslsurface/ install -p -m 0664 fslsurface_first.h /<>/include/fslsurface/ install -p -m 0664 fslsurface_structs.h /<>/include/fslsurface/ install -p -m 0664 fslsurfacefns.h /<>/include/fslsurface/ install -p -m 0664 fslsurfacegl.h /<>/include/fslsurface/ install -p -m 0664 fslsurfaceio.h /<>/include/fslsurface/ make[5]: Leaving directory '/<>/src/fslsurface' make[5]: Entering directory '/<>/src/fslsurface' Installing stable library archives install -p -m 0664 libfslsurface.a /<>/lib install -p -m 0664 libfslsurface_backcompat.a /<>/lib make[5]: Leaving directory '/<>/src/fslsurface' make[5]: Entering directory '/<>/src/fslsurface' Installing tcl scripts make[5]: Leaving directory '/<>/src/fslsurface' make[5]: Entering directory '/<>/src/fslsurface' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fslsurface/ make[5]: Leaving directory '/<>/src/fslsurface' make[5]: Entering directory '/<>/src/fslsurface' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fslsurface/ make[5]: Leaving directory '/<>/src/fslsurface' make[5]: Entering directory '/<>/src/fslsurface' make[5]: Leaving directory '/<>/src/fslsurface' make[4]: Leaving directory '/<>/src/fslsurface' make[3]: Leaving directory '/<>/src/fslsurface' make[2]: Leaving directory '/<>/src/fslsurface' make[1]: Leaving directory '/<>/src/fslsurface' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/libmeshutils make[1]: Entering directory '/<>/src/libmeshutils' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/<>/extras/include/libprob -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o meshUtils.o meshUtils.cc In file included from meshUtils.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ ar -r libmeshUtils.a meshUtils.o ar: creating libmeshUtils.a make[2]: Entering directory '/<>/src/libmeshutils' Installing stable library archives install -p -m 0664 libmeshUtils.a /<>/lib make[2]: Leaving directory '/<>/src/libmeshutils' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/<>/extras/include/libprob -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o run_mesh_utils.o run_mesh_utils.cc In file included from run_mesh_utils.cc:90: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/<>/extras/include/libprob -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o run_mesh_utils meshUtils.o run_mesh_utils.o -lwarpfns -lbasisfield -lfslvtkio -lMVdisc -lfirst_lib -lshapeModel -lmeshclass -lnewimage -lmiscmaths -lprob -lfslio -lniftiio -lznz -lutils -lnewmat -lz make[1]: Leaving directory '/<>/src/libmeshutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/libmeshutils install make[1]: Entering directory '/<>/src/libmeshutils' make[2]: Entering directory '/<>/src/libmeshutils' make[3]: Entering directory '/<>/src/libmeshutils' ar -r libmeshUtils.a meshUtils.o make[4]: Entering directory '/<>/src/libmeshutils' Installing stable library archives install -p -m 0664 libmeshUtils.a /<>/lib make[4]: Leaving directory '/<>/src/libmeshutils' make[3]: Leaving directory '/<>/src/libmeshutils' make[3]: Entering directory '/<>/src/libmeshutils' make[4]: Entering directory '/<>/src/libmeshutils' Installing stable binaries install -p -m 0775 run_mesh_utils /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/libmeshutils' make[4]: Entering directory '/<>/src/libmeshutils' make[5]: Entering directory '/<>/src/libmeshutils' Installing stable header files install -p -m 0664 meshUtils.h /<>/include/meshUtils/ make[5]: Leaving directory '/<>/src/libmeshutils' make[5]: Entering directory '/<>/src/libmeshutils' Installing stable library archives install -p -m 0664 libmeshUtils.a /<>/lib make[5]: Leaving directory '/<>/src/libmeshutils' make[5]: Entering directory '/<>/src/libmeshutils' Installing tcl scripts make[5]: Leaving directory '/<>/src/libmeshutils' make[5]: Entering directory '/<>/src/libmeshutils' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/meshUtils/ make[5]: Leaving directory '/<>/src/libmeshutils' make[5]: Entering directory '/<>/src/libmeshutils' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/meshUtils/ make[5]: Leaving directory '/<>/src/libmeshutils' make[5]: Entering directory '/<>/src/libmeshutils' make[5]: Leaving directory '/<>/src/libmeshutils' make[4]: Leaving directory '/<>/src/libmeshutils' make[3]: Leaving directory '/<>/src/libmeshutils' make[2]: Leaving directory '/<>/src/libmeshutils' make[1]: Leaving directory '/<>/src/libmeshutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/avwutils make[1]: Entering directory '/<>/src/avwutils' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslorient.o fslorient.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslorient fslorient.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslstats.o fslstats.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslstats fslstats.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslmerge.o fslmerge.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslmerge fslmerge.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslpspec.o fslpspec.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslpspec fslpspec.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslroi.o fslroi.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslroi fslroi.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslnvols.o fslnvols.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslnvols fslnvols.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fsl2ascii.o fsl2ascii.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fsl2ascii fsl2ascii.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslascii2img.o fslascii2img.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslascii2img fslascii2img.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslsplit.o fslsplit.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslsplit fslsplit.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslcc.o fslcc.cc In file included from fslcc.cc:68: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslcc fslcc.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslinterleave.o fslinterleave.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslinterleave fslinterleave.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslhd.o fslhd.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslhd fslhd.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslcpgeom.o fslcpgeom.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslcpgeom fslcpgeom.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslcreatehd.o fslcreatehd.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslcreatehd fslcreatehd.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslcorrecthd.o fslcorrecthd.cc fslcorrecthd.cc: In function ‘int main(int, char**)’: fslcorrecthd.cc:147:8: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(("FSLOUTPUTTYPE=NIFTI; ${FSLDIR}/bin/fslmaths " + string(outputName)).c_str()); //To clean up header ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslcorrecthd fslcorrecthd.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslmaths.o fslmaths.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslmaths fslmaths.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslcomplex fslcomplex.cc -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslfft fslfft.cc -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslmeants fslmeants.cc -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz In file included from fslmeants.cc:75: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslslice fslslice.cc -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslswapdim.o fslswapdim.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslswapdim_exe fslswapdim.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslchfiletype.o fslchfiletype.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslchfiletype_exe fslchfiletype.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o calc_grad_perc_dev.o calc_grad_perc_dev.cc In file included from calc_grad_perc_dev.cc:77: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o calc_grad_perc_dev calc_grad_perc_dev.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslsmoothfill.o fslsmoothfill.cc In file included from fslsmoothfill.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslsmoothfill fslsmoothfill.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fslselectvols.o fslselectvols.cc In file included from fslselectvols.cc:71: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslselectvols fslselectvols.o -lnewimage -lmiscmaths -lprob -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz make[1]: Leaving directory '/<>/src/avwutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/avwutils install make[1]: Entering directory '/<>/src/avwutils' make[2]: Entering directory '/<>/src/avwutils' make[3]: Entering directory '/<>/src/avwutils' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/avwutils' make[3]: Entering directory '/<>/src/avwutils' make[4]: Entering directory '/<>/src/avwutils' Installing stable binaries install -p -m 0775 fslorient /<>/debian/tmp/bin/ install -p -m 0775 fslstats /<>/debian/tmp/bin/ install -p -m 0775 fslmerge /<>/debian/tmp/bin/ install -p -m 0775 fslpspec /<>/debian/tmp/bin/ install -p -m 0775 fslroi /<>/debian/tmp/bin/ install -p -m 0775 fslnvols /<>/debian/tmp/bin/ install -p -m 0775 fsl2ascii /<>/debian/tmp/bin/ install -p -m 0775 fslascii2img /<>/debian/tmp/bin/ install -p -m 0775 fslsplit /<>/debian/tmp/bin/ install -p -m 0775 fslcc /<>/debian/tmp/bin/ install -p -m 0775 fslinterleave /<>/debian/tmp/bin/ install -p -m 0775 fslhd /<>/debian/tmp/bin/ install -p -m 0775 fslcpgeom /<>/debian/tmp/bin/ install -p -m 0775 fslcreatehd /<>/debian/tmp/bin/ install -p -m 0775 fslcorrecthd /<>/debian/tmp/bin/ install -p -m 0775 fslmaths /<>/debian/tmp/bin/ install -p -m 0775 fslcomplex /<>/debian/tmp/bin/ install -p -m 0775 fslfft /<>/debian/tmp/bin/ install -p -m 0775 fslmeants /<>/debian/tmp/bin/ install -p -m 0775 fslslice /<>/debian/tmp/bin/ install -p -m 0775 fslswapdim_exe /<>/debian/tmp/bin/ install -p -m 0775 fslchfiletype_exe /<>/debian/tmp/bin/ install -p -m 0775 calc_grad_perc_dev /<>/debian/tmp/bin/ install -p -m 0775 fslsmoothfill /<>/debian/tmp/bin/ install -p -m 0775 fslselectvols /<>/debian/tmp/bin/ install -p -m 0775 fslval /<>/debian/tmp/bin/ install -p -m 0775 fslchpixdim /<>/debian/tmp/bin/ install -p -m 0775 fslanimate /<>/debian/tmp/bin/ install -p -m 0775 fslsize /<>/debian/tmp/bin/ install -p -m 0775 sliceanimate /<>/debian/tmp/bin/ install -p -m 0775 fslinfo /<>/debian/tmp/bin/ install -p -m 0775 fsledithd /<>/debian/tmp/bin/ install -p -m 0775 avw2fsl /<>/debian/tmp/bin/ install -p -m 0775 fslswapdim /<>/debian/tmp/bin/ install -p -m 0775 fslchfiletype /<>/debian/tmp/bin/ install -p -m 0775 fslreorient2std /<>/debian/tmp/bin/ install -p -m 0775 fslmodhd /<>/debian/tmp/bin/ install -p -m 0775 fsladd /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/avwutils' make[4]: Entering directory '/<>/src/avwutils' make[5]: Entering directory '/<>/src/avwutils' Installing stable header files make[5]: Leaving directory '/<>/src/avwutils' make[5]: Entering directory '/<>/src/avwutils' Installing stable library archives make[5]: Leaving directory '/<>/src/avwutils' make[5]: Entering directory '/<>/src/avwutils' Installing tcl scripts make[5]: Leaving directory '/<>/src/avwutils' make[5]: Entering directory '/<>/src/avwutils' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/avwutils/ make[5]: Leaving directory '/<>/src/avwutils' make[5]: Entering directory '/<>/src/avwutils' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/avwutils/ make[5]: Leaving directory '/<>/src/avwutils' make[5]: Entering directory '/<>/src/avwutils' make[5]: Leaving directory '/<>/src/avwutils' make[4]: Leaving directory '/<>/src/avwutils' make[3]: Leaving directory '/<>/src/avwutils' make[2]: Leaving directory '/<>/src/avwutils' make[1]: Leaving directory '/<>/src/avwutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/basil make[1]: Entering directory '/<>/src/basil' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/basil' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/basil install make[1]: Entering directory '/<>/src/basil' make[2]: Entering directory '/<>/src/basil' make[3]: Entering directory '/<>/src/basil' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/basil' make[3]: Entering directory '/<>/src/basil' make[4]: Entering directory '/<>/src/basil' Installing stable binaries install -p -m 0775 basil /<>/debian/tmp/bin/ install -p -m 0775 basil_var /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/basil' make[4]: Entering directory '/<>/src/basil' make[5]: Entering directory '/<>/src/basil' Installing stable header files make[5]: Leaving directory '/<>/src/basil' make[5]: Entering directory '/<>/src/basil' Installing stable library archives make[5]: Leaving directory '/<>/src/basil' make[5]: Entering directory '/<>/src/basil' Installing tcl scripts make[5]: Leaving directory '/<>/src/basil' make[5]: Entering directory '/<>/src/basil' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/basil/ make[5]: Leaving directory '/<>/src/basil' make[5]: Entering directory '/<>/src/basil' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/basil/ make[5]: Leaving directory '/<>/src/basil' make[5]: Entering directory '/<>/src/basil' make[5]: Leaving directory '/<>/src/basil' make[4]: Leaving directory '/<>/src/basil' make[3]: Leaving directory '/<>/src/basil' make[2]: Leaving directory '/<>/src/basil' make[1]: Leaving directory '/<>/src/basil' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/bet2 make[1]: Entering directory '/<>/src/bet2' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o bet2.o bet2.cpp In file included from bet2.cpp:79: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o bet2 bet2.o -lfirst_lib -lfslvtkio -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o betsurf.o betsurf.cpp In file included from betsurf.cpp:79: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o betsurf betsurf.o -lfirst_lib -lfslvtkio -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o robustfov.o robustfov.cc In file included from robustfov.cc:77: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o robustfov robustfov.o -lfirst_lib -lfslvtkio -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz make[1]: Leaving directory '/<>/src/bet2' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/bet2 install make[1]: Entering directory '/<>/src/bet2' make[2]: Entering directory '/<>/src/bet2' make[3]: Entering directory '/<>/src/bet2' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/bet2' make[3]: Entering directory '/<>/src/bet2' make[4]: Entering directory '/<>/src/bet2' Installing stable binaries install -p -m 0775 bet2 /<>/debian/tmp/bin/ install -p -m 0775 betsurf /<>/debian/tmp/bin/ install -p -m 0775 robustfov /<>/debian/tmp/bin/ install -p -m 0775 old_betall /<>/debian/tmp/bin/ install -p -m 0775 bet /<>/debian/tmp/bin/ ln -s Runtcl Bet make[4]: Leaving directory '/<>/src/bet2' make[4]: Entering directory '/<>/src/bet2' make[5]: Entering directory '/<>/src/bet2' Installing stable header files install -p -m 0664 betsurf.h /<>/include/bet2/ make[5]: Leaving directory '/<>/src/bet2' make[5]: Entering directory '/<>/src/bet2' Installing stable library archives make[5]: Leaving directory '/<>/src/bet2' make[5]: Entering directory '/<>/src/bet2' Installing tcl scripts install -p -m 0775 bet.tcl /<>/debian/tmp/tcl/ install -p -m 0775 bet_proc.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/bet2' make[5]: Entering directory '/<>/src/bet2' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/bet2/ make[5]: Leaving directory '/<>/src/bet2' make[5]: Entering directory '/<>/src/bet2' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/bet2/ make[5]: Leaving directory '/<>/src/bet2' make[5]: Entering directory '/<>/src/bet2' make[5]: Leaving directory '/<>/src/bet2' make[4]: Leaving directory '/<>/src/bet2' make[3]: Leaving directory '/<>/src/bet2' make[2]: Leaving directory '/<>/src/bet2' make[1]: Leaving directory '/<>/src/bet2' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/cluster make[1]: Entering directory '/<>/src/cluster' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o smoothest.o smoothest.cc In file included from smoothest.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o smoothest smoothest.o -lutils -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lprob -lfslio -lniftiio -lznz -lnewmat -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o cluster.o cluster.cc In file included from cluster.cc:78: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o infer.o infer.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o cluster cluster.o infer.o -lutils -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o connectedcomp.o connectedcomp.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o connectedcomp connectedcomp.o -lutils -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lprob -lfslio -lniftiio -lznz -lnewmat -lz make[1]: Leaving directory '/<>/src/cluster' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/cluster install make[1]: Entering directory '/<>/src/cluster' make[2]: Entering directory '/<>/src/cluster' make[3]: Entering directory '/<>/src/cluster' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/cluster' make[3]: Entering directory '/<>/src/cluster' make[4]: Entering directory '/<>/src/cluster' Installing stable binaries install -p -m 0775 smoothest /<>/debian/tmp/bin/ install -p -m 0775 cluster /<>/debian/tmp/bin/ install -p -m 0775 connectedcomp /<>/debian/tmp/bin/ install -p -m 0775 cluster2html /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/cluster' make[4]: Entering directory '/<>/src/cluster' make[5]: Entering directory '/<>/src/cluster' Installing stable header files install -p -m 0664 infer.h /<>/include/cluster/ install -p -m 0664 smoothest.h /<>/include/cluster/ make[5]: Leaving directory '/<>/src/cluster' make[5]: Entering directory '/<>/src/cluster' Installing stable library archives make[5]: Leaving directory '/<>/src/cluster' make[5]: Entering directory '/<>/src/cluster' Installing tcl scripts make[5]: Leaving directory '/<>/src/cluster' make[5]: Entering directory '/<>/src/cluster' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/cluster/ make[5]: Leaving directory '/<>/src/cluster' make[5]: Entering directory '/<>/src/cluster' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/cluster/ make[5]: Leaving directory '/<>/src/cluster' make[5]: Entering directory '/<>/src/cluster' make[5]: Leaving directory '/<>/src/cluster' make[4]: Leaving directory '/<>/src/cluster' make[3]: Leaving directory '/<>/src/cluster' make[2]: Leaving directory '/<>/src/cluster' make[1]: Leaving directory '/<>/src/cluster' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fast4 make[1]: Entering directory '/<>/src/fast4' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -c -o fast_two.o fast_two.cc In file included from mriseg_two.h:72, from fast_two.cc:73: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ fast_two.cc: In function ‘int prior_registration(std::__cxx11::string, std::__cxx11::string, NEWIMAGE::volume&, NEWIMAGE::volume&, NEWIMAGE::volume&)’: fast_two.cc:221:8: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(reg); ~~~~~~^~~~~ fast_two.cc:225:15: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(reg); ~~~~~~^~~~~ fast_two.cc:229:8: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(reg); ~~~~~~^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -c -o mriseg_two.o mriseg_two.cc In file included from mriseg_two.h:72, from mriseg_two.cc:70: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -c -o multi_mriseg_two.o multi_mriseg_two.cc In file included from multi_mriseg_two.h:72, from multi_mriseg_two.cc:70: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fast fast_two.o mriseg_two.o multi_mriseg_two.o -lnewimage -lmiscmaths -lfslio -lniftiio -lutils -lnewmat -lznz -lm -lz make[1]: Leaving directory '/<>/src/fast4' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fast4 install make[1]: Entering directory '/<>/src/fast4' make[2]: Entering directory '/<>/src/fast4' make[3]: Entering directory '/<>/src/fast4' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/fast4' make[3]: Entering directory '/<>/src/fast4' make[4]: Entering directory '/<>/src/fast4' Installing stable binaries install -p -m 0775 fast /<>/debian/tmp/bin/ ln -s Runtcl Fast make[4]: Leaving directory '/<>/src/fast4' make[4]: Entering directory '/<>/src/fast4' make[5]: Entering directory '/<>/src/fast4' Installing stable header files install -p -m 0664 mriseg_two.h /<>/include/fast4/ install -p -m 0664 multi_mriseg_two.h /<>/include/fast4/ make[5]: Leaving directory '/<>/src/fast4' make[5]: Entering directory '/<>/src/fast4' Installing stable library archives make[5]: Leaving directory '/<>/src/fast4' make[5]: Entering directory '/<>/src/fast4' Installing tcl scripts install -p -m 0775 fast.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/fast4' make[5]: Entering directory '/<>/src/fast4' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fast4/ make[5]: Leaving directory '/<>/src/fast4' make[5]: Entering directory '/<>/src/fast4' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fast4/ make[5]: Leaving directory '/<>/src/fast4' make[5]: Entering directory '/<>/src/fast4' make[5]: Leaving directory '/<>/src/fast4' make[4]: Leaving directory '/<>/src/fast4' make[3]: Leaving directory '/<>/src/fast4' make[2]: Leaving directory '/<>/src/fast4' make[1]: Leaving directory '/<>/src/fast4' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/feat5 make[1]: Entering directory '/<>/src/feat5' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include -I/usr/include/libpng -I. -I/<>/include -I/<>/include -o cutoffcalc cutoffcalc.cc -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lprob -lnewmat -lutils -lfslio -lniftiio -lznz -lm -lz -lgdc -lgd -lpng In file included from cutoffcalc.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include -I/usr/include/libpng -I. -I/<>/include -I/<>/include -c -o featlib.o featlib.cc featlib.cc: In function ‘std::vector read_model(const string&, int*, int*)’: featlib.cc:220:7: warning: ignoring return value of ‘double atof(const char*)’, declared with attribute warn_unused_result [-Wunused-result] atof(find_key(designFile,control_line,"/Matrix")); ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ featlib.cc:225:11: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] fscanf(designFile,"%lf",&model[i]); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include -I/usr/include/libpng -I. -I/<>/include -I/<>/include -o feat_model featlib.o feat_model.cc -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lprob -lnewmat -lutils -lfslio -lniftiio -lznz -lm -lz -lgdc -lgd -lpng feat_model.cc: In function ‘int main(int, char**)’: feat_model.cc:1495:9: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(filename.c_str()); ~~~~~~^~~~~~~~~~~~~~~~~~ feat_model.cc: In function ‘void writeCovarianceImage(std::__cxx11::string, const Contrasts&, const NEWMAT::Matrix&, int, const NEWMAT::Matrix&, int, NEWMAT::DiagonalMatrix, FONT_DATA*, const NEWMAT::ColumnVector&)’: feat_model.cc:2138:11: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(filename.c_str()); ~~~~~~^~~~~~~~~~~~~~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include -I/usr/include/libpng -I. -I/<>/include -I/<>/include -o tsplot featlib.o tsplot.cc -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lprob -lnewmat -lutils -lfslio -lniftiio -lznz -lm -lz -lgdc -lgd -lpng g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include -I/usr/include/libpng -I. -I/<>/include -I/<>/include -o prewhiten featlib.o prewhiten.cc -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lprob -lnewmat -lutils -lfslio -lniftiio -lznz -lm -lz -lgdc -lgd -lpng prewhiten.cc: In function ‘int main(int, char**)’: prewhiten.cc:181:18: warning: ‘/filtered_func_data’ directive writing 19 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(fmridata,"%s/filtered_func_data",featdir); ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/bits/locale_classes.h:40, from /usr/include/c++/8/bits/ios_base.h:41, from /usr/include/c++/8/ios:42, from /usr/include/c++/8/ostream:38, from /usr/include/c++/8/iostream:39, from /<>/src/newimage/newimage.h:73, from /<>/src/newimage/newimageall.h:72, from featlib.h:73, from prewhiten.cc:150: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 20 and 10019 bytes into a destination of size 10000 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ prewhiten.cc:213:19: warning: ‘/stats/threshac1’ directive writing 16 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(thestring,"%s/stats/threshac1",featdir); ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/bits/locale_classes.h:40, from /usr/include/c++/8/bits/ios_base.h:41, from /usr/include/c++/8/ios:42, from /usr/include/c++/8/ostream:38, from /usr/include/c++/8/iostream:39, from /<>/src/newimage/newimage.h:73, from /<>/src/newimage/newimageall.h:72, from featlib.h:73, from prewhiten.cc:150: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 17 and 10016 bytes into a destination of size 10000 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ prewhiten.cc:226:21: warning: ‘/pw_res’ directive writing 7 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(thestring,"%s/pw_res",outputdir); ^~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/bits/locale_classes.h:40, from /usr/include/c++/8/bits/ios_base.h:41, from /usr/include/c++/8/ios:42, from /usr/include/c++/8/ostream:38, from /usr/include/c++/8/iostream:39, from /<>/src/newimage/newimage.h:73, from /<>/src/newimage/newimageall.h:72, from featlib.h:73, from prewhiten.cc:150: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 8 and 10007 bytes into a destination of size 10000 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include -I/usr/include/libpng -I. -I/<>/include -I/<>/include -o generateConfounds generateConfounds.cc -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lprob -lnewmat -lutils -lfslio -lniftiio -lznz -lm -lz -lgdc -lgd -lpng g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include -I/usr/include/libpng -I. -I/<>/include -I/<>/include -o popp popp.cc -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lprob -lnewmat -lutils -lfslio -lniftiio -lznz -lm -lz -lgdc -lgd -lpng In file included from popp.cc:78: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include -I/usr/include/libpng -I. -I/<>/include -I/<>/include -o pnm_evs pnm_evs.cc -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lprob -lnewmat -lutils -lfslio -lniftiio -lznz -lm -lz -lgdc -lgd -lpng In file included from pnm_evs.cc:74: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ /bin/cp -rf default_flobs.flobs /<>/debian/tmp/etc /bin/cp -f featconf /<>/debian/tmp/etc/fslconf/feat.tcl make[1]: Leaving directory '/<>/src/feat5' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/feat5 install make[1]: Entering directory '/<>/src/feat5' make[2]: Entering directory '/<>/src/feat5' make[3]: Entering directory '/<>/src/feat5' /bin/cp -rf default_flobs.flobs /<>/debian/tmp/etc /bin/cp -f featconf /<>/debian/tmp/etc/fslconf/feat.tcl make[3]: Leaving directory '/<>/src/feat5' make[3]: Entering directory '/<>/src/feat5' make[4]: Entering directory '/<>/src/feat5' Installing stable binaries install -p -m 0775 cutoffcalc /<>/debian/tmp/bin/ install -p -m 0775 feat_model /<>/debian/tmp/bin/ install -p -m 0775 tsplot /<>/debian/tmp/bin/ install -p -m 0775 prewhiten /<>/debian/tmp/bin/ install -p -m 0775 generateConfounds /<>/debian/tmp/bin/ install -p -m 0775 popp /<>/debian/tmp/bin/ install -p -m 0775 pnm_evs /<>/debian/tmp/bin/ install -p -m 0775 easythresh /<>/debian/tmp/bin/ install -p -m 0775 feat /<>/debian/tmp/bin/ install -p -m 0775 mccutup /<>/debian/tmp/bin/ install -p -m 0775 renderhighres /<>/debian/tmp/bin/ install -p -m 0775 featregapply /<>/debian/tmp/bin/ install -p -m 0775 featquery /<>/debian/tmp/bin/ install -p -m 0775 fslerrorreport /<>/debian/tmp/bin/ install -p -m 0775 invfeatreg /<>/debian/tmp/bin/ install -p -m 0775 updatefeatreg /<>/debian/tmp/bin/ install -p -m 0775 estnoise /<>/debian/tmp/bin/ install -p -m 0775 perfusion_subtract /<>/debian/tmp/bin/ install -p -m 0775 match_smoothing /<>/debian/tmp/bin/ install -p -m 0775 fsl_motion_outliers /<>/debian/tmp/bin/ install -p -m 0775 feat_gm_prepare /<>/debian/tmp/bin/ install -p -m 0775 mp_diffpow.sh /<>/debian/tmp/bin/ install -p -m 0775 pnm_stage1 /<>/debian/tmp/bin/ install -p -m 0775 mainfeatreg /<>/debian/tmp/bin/ install -p -m 0775 checkFEAT /<>/debian/tmp/bin/ install -p -m 0775 setFEAT /<>/debian/tmp/bin/ install -p -m 0775 autoaq /<>/debian/tmp/bin/ ln -s Runtcl Feat ln -s Runtcl Renderhighres ln -s Runtcl Featquery ln -s Runtcl Glm ln -s Runtcl Pnm make[4]: Leaving directory '/<>/src/feat5' make[4]: Entering directory '/<>/src/feat5' make[5]: Entering directory '/<>/src/feat5' Installing stable header files install -p -m 0664 featlib.h /<>/include/feat5/ make[5]: Leaving directory '/<>/src/feat5' make[5]: Entering directory '/<>/src/feat5' Installing stable library archives make[5]: Leaving directory '/<>/src/feat5' make[5]: Entering directory '/<>/src/feat5' Installing tcl scripts install -p -m 0775 feat.tcl /<>/debian/tmp/tcl/ install -p -m 0775 featlib.tcl /<>/debian/tmp/tcl/ install -p -m 0775 featquery.tcl /<>/debian/tmp/tcl/ install -p -m 0775 glm.tcl /<>/debian/tmp/tcl/ install -p -m 0775 pnm.tcl /<>/debian/tmp/tcl/ install -p -m 0775 renderhighres.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/feat5' make[5]: Entering directory '/<>/src/feat5' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/feat5/ make[5]: Leaving directory '/<>/src/feat5' make[5]: Entering directory '/<>/src/feat5' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/feat5/ make[5]: Leaving directory '/<>/src/feat5' make[5]: Entering directory '/<>/src/feat5' make[5]: Leaving directory '/<>/src/feat5' make[4]: Leaving directory '/<>/src/feat5' make[3]: Leaving directory '/<>/src/feat5' make[2]: Leaving directory '/<>/src/feat5' make[1]: Leaving directory '/<>/src/feat5' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/film make[1]: Entering directory '/<>/src/film' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o ContrastMgrOptions.o ContrastMgrOptions.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o ContrastMgr.o ContrastMgr.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o gaussComparer.o gaussComparer.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o AutoCorrEstimator.o AutoCorrEstimator.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o glm.o glm.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o paradigm.o paradigm.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o FilmOlsOptions.o FilmOlsOptions.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o FilmGlsOptionsRes.o FilmGlsOptionsRes.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o FilmGlsOptions.o FilmGlsOptions.cc In file included from FilmGlsOptions.h:74, from FilmGlsOptions.cc:72: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o glimGls.o glimGls.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o film_gls.o film_gls.cc In file included from FilmGlsOptions.h:74, from film_gls.cc:78: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o film_gls ContrastMgrOptions.o ContrastMgr.o gaussComparer.o AutoCorrEstimator.o glm.o paradigm.o FilmOlsOptions.o FilmGlsOptionsRes.o FilmGlsOptions.o glimGls.o film_gls.o -lfslsurface -lfslvtkio -lmeshclass -lfirst_lib -lnewimage -lmiscmaths -lutils -lm -lnewmat -lgiftiio -lfslio -lniftiio -lznz -lprob -lz -lexpat -l giftiio g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o contrast_mgr.o contrast_mgr.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o contrast_mgr ContrastMgrOptions.o ContrastMgr.o gaussComparer.o AutoCorrEstimator.o glm.o paradigm.o FilmOlsOptions.o FilmGlsOptionsRes.o FilmGlsOptions.o glimGls.o contrast_mgr.o -lfslsurface -lfslvtkio -lmeshclass -lfirst_lib -lnewimage -lmiscmaths -lutils -lm -lnewmat -lgiftiio -lfslio -lniftiio -lznz -lprob -lz -lexpat g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o ttoz.o ttoz.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o ttoz ContrastMgrOptions.o ContrastMgr.o gaussComparer.o AutoCorrEstimator.o glm.o paradigm.o FilmOlsOptions.o FilmGlsOptionsRes.o FilmGlsOptions.o glimGls.o ttoz.o -lfslsurface -lfslvtkio -lmeshclass -lfirst_lib -lnewimage -lmiscmaths -lutils -lm -lnewmat -lgiftiio -lfslio -lniftiio -lznz -lprob -lz -lexpat g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o ftoz.o ftoz.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o ftoz ContrastMgrOptions.o ContrastMgr.o gaussComparer.o AutoCorrEstimator.o glm.o paradigm.o FilmOlsOptions.o FilmGlsOptionsRes.o FilmGlsOptions.o glimGls.o ftoz.o -lfslsurface -lfslvtkio -lmeshclass -lfirst_lib -lnewimage -lmiscmaths -lutils -lm -lnewmat -lgiftiio -lfslio -lniftiio -lznz -lprob -lz -lexpat g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o ttologp.o ttologp.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o ttologp ContrastMgrOptions.o ContrastMgr.o gaussComparer.o AutoCorrEstimator.o glm.o paradigm.o FilmOlsOptions.o FilmGlsOptionsRes.o FilmGlsOptions.o glimGls.o ttologp.o -lfslsurface -lfslvtkio -lmeshclass -lfirst_lib -lnewimage -lmiscmaths -lutils -lm -lnewmat -lgiftiio -lfslio -lniftiio -lznz -lprob -lz -lexpat make[1]: Leaving directory '/<>/src/film' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/film install make[1]: Entering directory '/<>/src/film' make[2]: Entering directory '/<>/src/film' make[3]: Entering directory '/<>/src/film' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/film' make[3]: Entering directory '/<>/src/film' make[4]: Entering directory '/<>/src/film' Installing stable binaries install -p -m 0775 film_gls /<>/debian/tmp/bin/ install -p -m 0775 contrast_mgr /<>/debian/tmp/bin/ install -p -m 0775 ttoz /<>/debian/tmp/bin/ install -p -m 0775 ftoz /<>/debian/tmp/bin/ install -p -m 0775 ttologp /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/film' make[4]: Entering directory '/<>/src/film' make[5]: Entering directory '/<>/src/film' Installing stable header files install -p -m 0664 AutoCorrEstimator.h /<>/include/film/ install -p -m 0664 ContrastMgr.h /<>/include/film/ install -p -m 0664 ContrastMgrOptions.h /<>/include/film/ install -p -m 0664 FilmGlsOptions.h /<>/include/film/ install -p -m 0664 FilmGlsOptionsRes.h /<>/include/film/ install -p -m 0664 FilmOlsOptions.h /<>/include/film/ install -p -m 0664 gaussComparer.h /<>/include/film/ install -p -m 0664 glimGls.h /<>/include/film/ install -p -m 0664 glm.h /<>/include/film/ install -p -m 0664 histogram.h /<>/include/film/ install -p -m 0664 paradigm.h /<>/include/film/ make[5]: Leaving directory '/<>/src/film' make[5]: Entering directory '/<>/src/film' Installing stable library archives make[5]: Leaving directory '/<>/src/film' make[5]: Entering directory '/<>/src/film' Installing tcl scripts make[5]: Leaving directory '/<>/src/film' make[5]: Entering directory '/<>/src/film' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/film/ make[5]: Leaving directory '/<>/src/film' make[5]: Entering directory '/<>/src/film' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/film/ make[5]: Leaving directory '/<>/src/film' make[5]: Entering directory '/<>/src/film' make[5]: Leaving directory '/<>/src/film' make[4]: Leaving directory '/<>/src/film' make[3]: Leaving directory '/<>/src/film' make[2]: Leaving directory '/<>/src/film' make[1]: Leaving directory '/<>/src/film' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/filmbabe make[1]: Entering directory '/<>/src/filmbabe' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o halfcosbasisoptions.o halfcosbasisoptions.cc In file included from halfcosbasisoptions.h:77, from halfcosbasisoptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o filmbabe_manager.o filmbabe_manager.cc In file included from filmbabeoptions.h:77, from filmbabe_manager.h:78, from filmbabe_manager.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o filmbabeoptions.o filmbabeoptions.cc In file included from filmbabeoptions.h:77, from filmbabeoptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o filmbabe_vb_flobs.o filmbabe_vb_flobs.cc In file included from filmbabeoptions.h:77, from filmbabe_vb_flobs.h:78, from filmbabe_vb_flobs.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o filmbabe.o filmbabe.cc In file included from filmbabeoptions.h:77, from filmbabe.cc:80: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o filmbabe halfcosbasisoptions.o filmbabe_manager.o filmbabeoptions.o filmbabe_vb_flobs.o filmbabe.o -lutils -lmiscplot -lmiscpic -lnewimage -lmiscmaths -lnewmat -lfslio -lniftiio -lprob -lgdc -lgd -lpng -lznz -lz -lm g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o halfcosbasis.o halfcosbasis.cc In file included from halfcosbasisoptions.h:77, from halfcosbasis.cc:80: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o halfcosbasis halfcosbasisoptions.o halfcosbasis.o -lutils -lmiscplot -lmiscpic -lnewimage -lmiscmaths -lnewmat -lfslio -lniftiio -lprob -lgdc -lgd -lpng -lznz -lz -lm make[1]: Leaving directory '/<>/src/filmbabe' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/filmbabe install make[1]: Entering directory '/<>/src/filmbabe' make[2]: Entering directory '/<>/src/filmbabe' make[3]: Entering directory '/<>/src/filmbabe' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/filmbabe' make[3]: Entering directory '/<>/src/filmbabe' make[4]: Entering directory '/<>/src/filmbabe' Installing stable binaries install -p -m 0775 filmbabe /<>/debian/tmp/bin/ install -p -m 0775 halfcosbasis /<>/debian/tmp/bin/ install -p -m 0775 filmbabescript /<>/debian/tmp/bin/ ln -s Runtcl Make_flobs make[4]: Leaving directory '/<>/src/filmbabe' make[4]: Entering directory '/<>/src/filmbabe' make[5]: Entering directory '/<>/src/filmbabe' Installing stable header files install -p -m 0664 connected_offset.h /<>/include/filmbabe/ install -p -m 0664 filmbabe_manager.h /<>/include/filmbabe/ install -p -m 0664 filmbabe_vb_flobs.h /<>/include/filmbabe/ install -p -m 0664 filmbabeoptions.h /<>/include/filmbabe/ install -p -m 0664 halfcosbasisoptions.h /<>/include/filmbabe/ make[5]: Leaving directory '/<>/src/filmbabe' make[5]: Entering directory '/<>/src/filmbabe' Installing stable library archives make[5]: Leaving directory '/<>/src/filmbabe' make[5]: Entering directory '/<>/src/filmbabe' Installing tcl scripts install -p -m 0775 make_flobs.tcl /<>/debian/tmp/tcl/ install -p -m 0775 halfcoshrfparams.ppm /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/filmbabe' make[5]: Entering directory '/<>/src/filmbabe' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/filmbabe/ make[5]: Leaving directory '/<>/src/filmbabe' make[5]: Entering directory '/<>/src/filmbabe' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/filmbabe/ make[5]: Leaving directory '/<>/src/filmbabe' make[5]: Entering directory '/<>/src/filmbabe' make[5]: Leaving directory '/<>/src/filmbabe' make[4]: Leaving directory '/<>/src/filmbabe' make[3]: Leaving directory '/<>/src/filmbabe' make[2]: Leaving directory '/<>/src/filmbabe' make[1]: Leaving directory '/<>/src/filmbabe' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/flirt make[1]: Entering directory '/<>/src/flirt' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o globaloptions.o globaloptions.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o flirt.o flirt.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o flirt globaloptions.o flirt.o -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o convert_xfm.o convert_xfm.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o convert_xfm convert_xfm.o -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o avscale.o avscale.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o avscale avscale.o -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o rmsdiff.o rmsdiff.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o rmsdiff rmsdiff.o -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o std2imgcoord.o std2imgcoord.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o std2imgcoord std2imgcoord.o -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o img2stdcoord.o img2stdcoord.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o img2stdcoord img2stdcoord.o -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o img2imgcoord.o img2imgcoord.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o img2imgcoord img2imgcoord.o -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o applyxfm4D.o applyxfm4D.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o applyxfm4D applyxfm4D.o -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o pointflirt.o pointflirt.cc In file included from pointflirt.cc:72: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o pointflirt pointflirt.o -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o makerot.o makerot.cc In file included from makerot.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o makerot makerot.o -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o midtrans.o midtrans.cc In file included from midtrans.cc:74: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o midtrans midtrans.o -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz /bin/cp -rf flirtsch/* /<>/debian/tmp/etc/flirtsch/. make[1]: Leaving directory '/<>/src/flirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/flirt install make[1]: Entering directory '/<>/src/flirt' make[2]: Entering directory '/<>/src/flirt' make[3]: Entering directory '/<>/src/flirt' /bin/cp -rf flirtsch/* /<>/debian/tmp/etc/flirtsch/. make[3]: Leaving directory '/<>/src/flirt' make[3]: Entering directory '/<>/src/flirt' make[4]: Entering directory '/<>/src/flirt' Installing stable binaries install -p -m 0775 flirt /<>/debian/tmp/bin/ install -p -m 0775 convert_xfm /<>/debian/tmp/bin/ install -p -m 0775 avscale /<>/debian/tmp/bin/ install -p -m 0775 rmsdiff /<>/debian/tmp/bin/ install -p -m 0775 std2imgcoord /<>/debian/tmp/bin/ install -p -m 0775 img2stdcoord /<>/debian/tmp/bin/ install -p -m 0775 img2imgcoord /<>/debian/tmp/bin/ install -p -m 0775 applyxfm4D /<>/debian/tmp/bin/ install -p -m 0775 pointflirt /<>/debian/tmp/bin/ install -p -m 0775 makerot /<>/debian/tmp/bin/ install -p -m 0775 midtrans /<>/debian/tmp/bin/ install -p -m 0775 extracttxt /<>/debian/tmp/bin/ install -p -m 0775 pairreg /<>/debian/tmp/bin/ install -p -m 0775 standard_space_roi /<>/debian/tmp/bin/ install -p -m 0775 flirt_average /<>/debian/tmp/bin/ install -p -m 0775 epi_reg /<>/debian/tmp/bin/ install -p -m 0775 aff2rigid /<>/debian/tmp/bin/ ln -s Runtcl Flirt ln -s Runtcl InvertXFM ln -s Runtcl ApplyXFM ln -s Runtcl ConcatXFM ln -s Runtcl Nudge make[4]: Leaving directory '/<>/src/flirt' make[4]: Entering directory '/<>/src/flirt' make[5]: Entering directory '/<>/src/flirt' Installing stable header files make[5]: Leaving directory '/<>/src/flirt' make[5]: Entering directory '/<>/src/flirt' Installing stable library archives make[5]: Leaving directory '/<>/src/flirt' make[5]: Entering directory '/<>/src/flirt' Installing tcl scripts install -p -m 0775 applyxfm.tcl /<>/debian/tmp/tcl/ install -p -m 0775 concatxfm.tcl /<>/debian/tmp/tcl/ install -p -m 0775 flirt.tcl /<>/debian/tmp/tcl/ install -p -m 0775 flirt_proc.tcl /<>/debian/tmp/tcl/ install -p -m 0775 invertxfm.tcl /<>/debian/tmp/tcl/ install -p -m 0775 nudge.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/flirt' make[5]: Entering directory '/<>/src/flirt' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/flirt/ make[5]: Leaving directory '/<>/src/flirt' make[5]: Entering directory '/<>/src/flirt' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/flirt/ make[5]: Leaving directory '/<>/src/flirt' make[5]: Entering directory '/<>/src/flirt' make[5]: Leaving directory '/<>/src/flirt' make[4]: Leaving directory '/<>/src/flirt' make[3]: Leaving directory '/<>/src/flirt' make[2]: Leaving directory '/<>/src/flirt' make[1]: Leaving directory '/<>/src/flirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fabber make[1]: Entering directory '/<>/src/fabber' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_custom.o fwdmodel_custom.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_flobs.o fwdmodel_flobs.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o tools.o tools.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_q2tips.o fwdmodel_q2tips.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o inference_spatialvb.o inference_spatialvb.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o dataset.o dataset.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o inference_vb.o inference_vb.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o noisemodel.o noisemodel.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o noisemodel_white.o noisemodel_white.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_quipss2.o fwdmodel_quipss2.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_pcASL.o fwdmodel_pcASL.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel.o fwdmodel.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_simple.o fwdmodel_simple.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_linear.o fwdmodel_linear.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o noisemodel_ar.o noisemodel_ar.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o inference.o inference.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o dist_mvn.o dist_mvn.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o easylog.o easylog.cc easylog.cc: In static member function ‘static void EasyLog::StartLog(const string&, bool)’: easylog.cc:128:9: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system( ("uname -a > " + outDir + "/uname.txt").c_str() ); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ easylog.cc:134:9: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(("ln -sfn '" + outDir + "' '" + basename + "_latest'").c_str()); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o easyoptions.o easyoptions.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_asl_grase.o fwdmodel_asl_grase.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_asl_buxton.o fwdmodel_asl_buxton.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o inference_nlls.o inference_nlls.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_asl_pvc.o fwdmodel_asl_pvc.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_asl_satrecov.o fwdmodel_asl_satrecov.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_asl_quasar.o fwdmodel_asl_quasar.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fwdmodel_cest.o fwdmodel_cest.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o fabber.o fabber.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L. -L/<>/lib -L/<>/lib -o fabber fwdmodel_custom.o fwdmodel_flobs.o tools.o fwdmodel_q2tips.o inference_spatialvb.o dataset.o inference_vb.o noisemodel.o noisemodel_white.o fwdmodel_quipss2.o fwdmodel_pcASL.o fwdmodel.o fwdmodel_simple.o fwdmodel_linear.o noisemodel_ar.o inference.o dist_mvn.o easylog.o easyoptions.o fwdmodel_asl_grase.o fwdmodel_asl_buxton.o inference_nlls.o fwdmodel_asl_pvc.o fwdmodel_asl_satrecov.o fwdmodel_asl_quasar.o fwdmodel_cest.o fabber.o -lutils -lnewimage -lmiscmaths -lprob -lnewmat -lfslio -lniftiio -lznz -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -c -o mvntool.o mvntool.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L. -L/<>/lib -L/<>/lib -o mvntool fwdmodel_custom.o fwdmodel_flobs.o tools.o fwdmodel_q2tips.o inference_spatialvb.o dataset.o inference_vb.o noisemodel.o noisemodel_white.o fwdmodel_quipss2.o fwdmodel_pcASL.o fwdmodel.o fwdmodel_simple.o fwdmodel_linear.o noisemodel_ar.o inference.o dist_mvn.o easylog.o easyoptions.o fwdmodel_asl_grase.o fwdmodel_asl_buxton.o inference_nlls.o fwdmodel_asl_pvc.o fwdmodel_asl_satrecov.o fwdmodel_asl_quasar.o fwdmodel_cest.o mvntool.o -lutils -lnewimage -lmiscmaths -lprob -lnewmat -lfslio -lniftiio -lznz -lz #g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L. -L/<>/lib -L/<>/lib -D__FABBER_LIBRARYONLY -o mvntool fwdmodel_custom.o fwdmodel_flobs.o tools.o fwdmodel_q2tips.o inference_spatialvb.o dataset.o inference_vb.o noisemodel.o noisemodel_white.o fwdmodel_quipss2.o fwdmodel_pcASL.o fwdmodel.o fwdmodel_simple.o fwdmodel_linear.o noisemodel_ar.o inference.o dist_mvn.o easylog.o easyoptions.o fwdmodel_asl_grase.o fwdmodel_asl_buxton.o inference_nlls.o fwdmodel_asl_pvc.o fwdmodel_asl_satrecov.o fwdmodel_asl_quasar.o fwdmodel_cest.o fabber.o -lutils -lnewimage -lmiscmaths -lprob -lnewmat -lfslio -lniftiio -lznz -lz #g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include/boost -D__OXASL -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L. -L/<>/lib -L/<>/lib -D__FABBER_LIBRARYONLY -o mvntool fwdmodel_custom.o fwdmodel_flobs.o tools.o fwdmodel_q2tips.o inference_spatialvb.o dataset.o inference_vb.o noisemodel.o noisemodel_white.o fwdmodel_quipss2.o fwdmodel_pcASL.o fwdmodel.o fwdmodel_simple.o fwdmodel_linear.o noisemodel_ar.o inference.o dist_mvn.o easylog.o easyoptions.o fwdmodel_asl_grase.o fwdmodel_asl_buxton.o inference_nlls.o fwdmodel_asl_pvc.o fwdmodel_asl_satrecov.o fwdmodel_asl_quasar.o fwdmodel_cest.o mvntool.o -lutils -lnewimage -lmiscmaths -lprob -lnewmat -lfslio -lniftiio -lznz -lz make[1]: Leaving directory '/<>/src/fabber' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fabber install make[1]: Entering directory '/<>/src/fabber' make[2]: Entering directory '/<>/src/fabber' make[3]: Entering directory '/<>/src/fabber' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/fabber' make[3]: Entering directory '/<>/src/fabber' make[4]: Entering directory '/<>/src/fabber' Installing stable binaries install -p -m 0775 fabber /<>/debian/tmp/bin/ install -p -m 0775 mvntool /<>/debian/tmp/bin/ install -p -m 0775 fabber_var /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/fabber' make[4]: Entering directory '/<>/src/fabber' make[5]: Entering directory '/<>/src/fabber' Installing stable header files install -p -m 0664 asl_models.h /<>/include/fabber/ install -p -m 0664 convergence.h /<>/include/fabber/ install -p -m 0664 dataset.h /<>/include/fabber/ install -p -m 0664 dist_gamma.h /<>/include/fabber/ install -p -m 0664 dist_mvn.h /<>/include/fabber/ install -p -m 0664 easylog.h /<>/include/fabber/ install -p -m 0664 easyoptions.h /<>/include/fabber/ install -p -m 0664 fwdmodel.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_buxton.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_devel.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_dynangio.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_grase.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_pvc.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_quasar.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_satrecov.h /<>/include/fabber/ install -p -m 0664 fwdmodel_cest.h /<>/include/fabber/ install -p -m 0664 fwdmodel_cest_devel.h /<>/include/fabber/ install -p -m 0664 fwdmodel_custom.h /<>/include/fabber/ install -p -m 0664 fwdmodel_dsc.h /<>/include/fabber/ install -p -m 0664 fwdmodel_fasl.h /<>/include/fabber/ install -p -m 0664 fwdmodel_flex.h /<>/include/fabber/ install -p -m 0664 fwdmodel_flobs.h /<>/include/fabber/ install -p -m 0664 fwdmodel_linear.h /<>/include/fabber/ install -p -m 0664 fwdmodel_pcASL.h /<>/include/fabber/ install -p -m 0664 fwdmodel_q2tips.h /<>/include/fabber/ install -p -m 0664 fwdmodel_quipss2.h /<>/include/fabber/ install -p -m 0664 fwdmodel_simple.h /<>/include/fabber/ install -p -m 0664 inference.h /<>/include/fabber/ install -p -m 0664 inference_nlls.h /<>/include/fabber/ install -p -m 0664 inference_spatialvb.h /<>/include/fabber/ install -p -m 0664 inference_vb.h /<>/include/fabber/ install -p -m 0664 noisemodel.h /<>/include/fabber/ install -p -m 0664 noisemodel_ar.h /<>/include/fabber/ install -p -m 0664 noisemodel_white.h /<>/include/fabber/ install -p -m 0664 tools.h /<>/include/fabber/ make[5]: Leaving directory '/<>/src/fabber' make[5]: Entering directory '/<>/src/fabber' Installing stable library archives make[5]: Leaving directory '/<>/src/fabber' make[5]: Entering directory '/<>/src/fabber' Installing tcl scripts make[5]: Leaving directory '/<>/src/fabber' make[5]: Entering directory '/<>/src/fabber' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fabber/ make[5]: Leaving directory '/<>/src/fabber' make[5]: Entering directory '/<>/src/fabber' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fabber/ make[5]: Leaving directory '/<>/src/fabber' make[5]: Entering directory '/<>/src/fabber' make[5]: Leaving directory '/<>/src/fabber' make[4]: Leaving directory '/<>/src/fabber' make[3]: Leaving directory '/<>/src/fabber' make[2]: Leaving directory '/<>/src/fabber' make[1]: Leaving directory '/<>/src/fabber' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/baycest make[1]: Entering directory '/<>/src/baycest' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/baycest' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/baycest install make[1]: Entering directory '/<>/src/baycest' make[2]: Entering directory '/<>/src/baycest' make[3]: Entering directory '/<>/src/baycest' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/baycest' make[3]: Entering directory '/<>/src/baycest' make[4]: Entering directory '/<>/src/baycest' Installing stable binaries install -p -m 0775 baycest /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/baycest' make[4]: Entering directory '/<>/src/baycest' make[5]: Entering directory '/<>/src/baycest' Installing stable header files make[5]: Leaving directory '/<>/src/baycest' make[5]: Entering directory '/<>/src/baycest' Installing stable library archives make[5]: Leaving directory '/<>/src/baycest' make[5]: Entering directory '/<>/src/baycest' Installing tcl scripts make[5]: Leaving directory '/<>/src/baycest' make[5]: Entering directory '/<>/src/baycest' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/baycest/ make[5]: Leaving directory '/<>/src/baycest' make[5]: Entering directory '/<>/src/baycest' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/baycest/ make[5]: Leaving directory '/<>/src/baycest' make[5]: Entering directory '/<>/src/baycest' make[5]: Leaving directory '/<>/src/baycest' make[4]: Leaving directory '/<>/src/baycest' make[3]: Leaving directory '/<>/src/baycest' make[2]: Leaving directory '/<>/src/baycest' make[1]: Leaving directory '/<>/src/baycest' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslvbm make[1]: Entering directory '/<>/src/fslvbm' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/fslvbm' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslvbm install make[1]: Entering directory '/<>/src/fslvbm' make[2]: Entering directory '/<>/src/fslvbm' make[3]: Entering directory '/<>/src/fslvbm' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/fslvbm' make[3]: Entering directory '/<>/src/fslvbm' make[4]: Entering directory '/<>/src/fslvbm' Installing stable binaries install -p -m 0775 fslvbm_1_bet /<>/debian/tmp/bin/ install -p -m 0775 fslvbm_2_template /<>/debian/tmp/bin/ install -p -m 0775 fslvbm_3_proc /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/fslvbm' make[4]: Entering directory '/<>/src/fslvbm' make[5]: Entering directory '/<>/src/fslvbm' Installing stable header files make[5]: Leaving directory '/<>/src/fslvbm' make[5]: Entering directory '/<>/src/fslvbm' Installing stable library archives make[5]: Leaving directory '/<>/src/fslvbm' make[5]: Entering directory '/<>/src/fslvbm' Installing tcl scripts make[5]: Leaving directory '/<>/src/fslvbm' make[5]: Entering directory '/<>/src/fslvbm' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fslvbm/ make[5]: Leaving directory '/<>/src/fslvbm' make[5]: Entering directory '/<>/src/fslvbm' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fslvbm/ make[5]: Leaving directory '/<>/src/fslvbm' make[5]: Entering directory '/<>/src/fslvbm' make[5]: Leaving directory '/<>/src/fslvbm' make[4]: Leaving directory '/<>/src/fslvbm' make[3]: Leaving directory '/<>/src/fslvbm' make[2]: Leaving directory '/<>/src/fslvbm' make[1]: Leaving directory '/<>/src/fslvbm' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/mcflirt make[1]: Entering directory '/<>/src/mcflirt' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o mcflirt.o mcflirt.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o Globaloptions.o Globaloptions.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o Log.o Log.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o mcflirt mcflirt.o Globaloptions.o Log.o -lnewimage -lmiscmaths -lutils -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lz make[1]: Leaving directory '/<>/src/mcflirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/mcflirt install make[1]: Entering directory '/<>/src/mcflirt' make[2]: Entering directory '/<>/src/mcflirt' make[3]: Entering directory '/<>/src/mcflirt' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/mcflirt' make[3]: Entering directory '/<>/src/mcflirt' make[4]: Entering directory '/<>/src/mcflirt' Installing stable binaries install -p -m 0775 mcflirt /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/mcflirt' make[4]: Entering directory '/<>/src/mcflirt' make[5]: Entering directory '/<>/src/mcflirt' Installing stable header files install -p -m 0664 Globaloptions.h /<>/include/mcflirt/ install -p -m 0664 Log.h /<>/include/mcflirt/ make[5]: Leaving directory '/<>/src/mcflirt' make[5]: Entering directory '/<>/src/mcflirt' Installing stable library archives make[5]: Leaving directory '/<>/src/mcflirt' make[5]: Entering directory '/<>/src/mcflirt' Installing tcl scripts make[5]: Leaving directory '/<>/src/mcflirt' make[5]: Entering directory '/<>/src/mcflirt' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/mcflirt/ make[5]: Leaving directory '/<>/src/mcflirt' make[5]: Entering directory '/<>/src/mcflirt' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/mcflirt/ make[5]: Leaving directory '/<>/src/mcflirt' make[5]: Entering directory '/<>/src/mcflirt' make[5]: Leaving directory '/<>/src/mcflirt' make[4]: Leaving directory '/<>/src/mcflirt' make[3]: Leaving directory '/<>/src/mcflirt' make[2]: Leaving directory '/<>/src/mcflirt' make[1]: Leaving directory '/<>/src/mcflirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/melodic make[1]: Entering directory '/<>/src/melodic' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o ggmix.o ggmix.cc g++ -shared -o libggmix.so ggmix.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lnewmat -lmiscmaths -lnewimage g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o melhlprfns.o melhlprfns.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o fsl_regfilt.o fsl_regfilt.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fsl_regfilt melhlprfns.o fsl_regfilt.o -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o fsl_glm.o fsl_glm.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fsl_glm melhlprfns.o fsl_glm.o -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o meloptions.o meloptions.cc meloptions.cc: In member function ‘void Melodic::MelodicOptions::parse_command_line(int, char**, Utilities::Log&, const string&)’: meloptions.cc:255:13: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(("mkdir "+ logdir.value() + " 2>/dev/null").c_str()); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o melgmix.o melgmix.cc In file included from melgmix.cc:74: melgmix.h:220:47: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) MelodicOptions &opts; ^~~~ melgmix.h:221:36: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) Log &logger; //global log file ^~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o meldata.o meldata.cc meldata.cc: In member function ‘void Melodic::MelodicData::est_smoothness()’: meldata.cc:989:13: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(callSMOOTHESTstr); ~~~~~~^~~~~~~~~~~~~~~~~~ meldata.cc: In member function ‘void Melodic::MelodicData::create_mask(NEWIMAGE::volume&)’: meldata.cc:1133:13: warning: ignoring return value of ‘char* tmpnam(char*)’, declared with attribute warn_unused_result [-Wunused-result] tmpnam(Mean_fname); // generate a tmp name ~~~~~~^~~~~~~~~~~~ meldata.cc:1156:11: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(tmpstr.c_str()); ~~~~~~^~~~~~~~~~~~~~~~ meldata.cc:1165:13: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(callRMstr); ~~~~~~^~~~~~~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o melpca.o melpca.cc In file included from melpca.cc:79: melpca.h:109:46: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) MelodicReport &report; ^~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o melica.o melica.cc In file included from melica.h:76, from melica.cc:80: melpca.h:109:46: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) MelodicReport &report; ^~~~~~ In file included from melreport.h:80, from melica.h:82, from melica.cc:80: melgmix.h:220:47: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) MelodicOptions &opts; ^~~~ melgmix.h:221:36: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) Log &logger; //global log file ^~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o melreport.o melreport.cc In file included from melreport.h:77, from melreport.cc:74: melpca.h:109:46: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) MelodicReport &report; ^~~~~~ In file included from melreport.h:80, from melreport.cc:74: melgmix.h:220:47: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) MelodicOptions &opts; ^~~~ melgmix.h:221:36: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) Log &logger; //global log file ^~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o melodic.o melodic.cc In file included from melodic.cc:85: melpca.h:109:46: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) MelodicReport &report; ^~~~~~ In file included from melreport.h:80, from melica.h:82, from melodic.cc:86: melgmix.h:220:47: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) MelodicOptions &opts; ^~~~ melgmix.h:221:36: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) Log &logger; //global log file ^~~~~~ In file included from melica.h:82, from melodic.cc:86: melreport.h: In constructor ‘Melodic::MelodicReport::MelodicReport(Melodic::MelodicData&, Melodic::MelodicOptions&, Utilities::Log&)’: melreport.h:105:15: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(("mkdir "+ logger.appendDir("report") + " 2>/dev/null").c_str()); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o melodic meloptions.o melhlprfns.o melgmix.o meldata.o melpca.o melica.o melreport.o melodic.o -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz /usr/bin/ld: meldata.o: in function `Melodic::MelodicData::create_mask(NEWIMAGE::volume&)': ./src/melodic/meldata.cc:1133: warning: the use of `tmpnam' is dangerous, better use `mkstemp' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o fsl_sbca.o fsl_sbca.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fsl_sbca melhlprfns.o fsl_sbca.o -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o fsl_mvlm.o fsl_mvlm.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fsl_mvlm melhlprfns.o fsl_mvlm.o -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o fsl_schurprod.o fsl_schurprod.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -O3 -Wno-deprecated -ggdb -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fsl_schurprod melhlprfns.o fsl_schurprod.o -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz make[1]: Leaving directory '/<>/src/melodic' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/melodic install make[1]: Entering directory '/<>/src/melodic' make[2]: Entering directory '/<>/src/melodic' make[3]: Entering directory '/<>/src/melodic' g++ -shared -o libggmix.so ggmix.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lnewmat -lmiscmaths -lnewimage make[3]: Leaving directory '/<>/src/melodic' make[3]: Entering directory '/<>/src/melodic' make[4]: Entering directory '/<>/src/melodic' Installing stable binaries install -p -m 0775 fsl_glm /<>/debian/tmp/bin/ install -p -m 0775 fsl_sbca /<>/debian/tmp/bin/ install -p -m 0775 fsl_mvlm /<>/debian/tmp/bin/ install -p -m 0775 fsl_regfilt /<>/debian/tmp/bin/ install -p -m 0775 fsl_schurprod /<>/debian/tmp/bin/ install -p -m 0775 melodic /<>/debian/tmp/bin/ install -p -m 0775 fsl_sbca /<>/debian/tmp/bin/ install -p -m 0775 fsl_mvlm /<>/debian/tmp/bin/ install -p -m 0775 fsl_schurprod /<>/debian/tmp/bin/ install -p -m 0775 dual_regression /<>/debian/tmp/bin/ ln -s Runtcl Melodic make[4]: Leaving directory '/<>/src/melodic' make[4]: Entering directory '/<>/src/melodic' make[5]: Entering directory '/<>/src/melodic' Installing stable header files install -p -m 0664 ggmix.h /<>/include/melodic/ install -p -m 0664 meldata.h /<>/include/melodic/ install -p -m 0664 melgmix.h /<>/include/melodic/ install -p -m 0664 melhlprfns.h /<>/include/melodic/ install -p -m 0664 melica.h /<>/include/melodic/ install -p -m 0664 melodic.h /<>/include/melodic/ install -p -m 0664 meloptions.h /<>/include/melodic/ install -p -m 0664 melpca.h /<>/include/melodic/ install -p -m 0664 melreport.h /<>/include/melodic/ make[5]: Leaving directory '/<>/src/melodic' make[5]: Entering directory '/<>/src/melodic' Installing stable library archives install -p -m 0664 libggmix.so /<>/lib make[5]: Leaving directory '/<>/src/melodic' make[5]: Entering directory '/<>/src/melodic' Installing tcl scripts install -p -m 0775 melodic.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/melodic' make[5]: Entering directory '/<>/src/melodic' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/melodic/ make[5]: Leaving directory '/<>/src/melodic' make[5]: Entering directory '/<>/src/melodic' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/melodic/ make[5]: Leaving directory '/<>/src/melodic' make[5]: Entering directory '/<>/src/melodic' make[5]: Leaving directory '/<>/src/melodic' make[4]: Leaving directory '/<>/src/melodic' make[3]: Leaving directory '/<>/src/melodic' make[2]: Leaving directory '/<>/src/melodic' make[1]: Leaving directory '/<>/src/melodic' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_c make[1]: Entering directory '/<>/src/misc_c' gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -o whirlgif whirlgif.c gifdecod.c gifencod.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -o hist2prob hist2prob.c -L/usr/lib -lm -lz hist2prob.c: In function ‘main’: hist2prob.c:116:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] fread(hist_data,sizeof(float),image_size,ifp); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -o morph_kernel morph_kernel.c g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -o ptoz ptoz.cc -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lprob -lm -lz gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -o tmpnam tmpnam.c tmpnam.c: In function ‘main’: tmpnam.c:86:3: warning: ignoring return value of ‘mkstemp’, declared with attribute warn_unused_result [-Wunused-result] mkstemp(theprefix); ^~~~~~~~~~~~~~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -o ztop ztop.cc -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lprob -lm -lz make[1]: Leaving directory '/<>/src/misc_c' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_c install make[1]: Entering directory '/<>/src/misc_c' make[2]: Entering directory '/<>/src/misc_c' make[3]: Entering directory '/<>/src/misc_c' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/misc_c' make[3]: Entering directory '/<>/src/misc_c' make[4]: Entering directory '/<>/src/misc_c' Installing stable binaries install -p -m 0775 whirlgif /<>/debian/tmp/bin/ install -p -m 0775 hist2prob /<>/debian/tmp/bin/ install -p -m 0775 morph_kernel /<>/debian/tmp/bin/ install -p -m 0775 ptoz /<>/debian/tmp/bin/ install -p -m 0775 tmpnam /<>/debian/tmp/bin/ install -p -m 0775 ztop /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/misc_c' make[4]: Entering directory '/<>/src/misc_c' make[5]: Entering directory '/<>/src/misc_c' Installing stable header files install -p -m 0664 whirlgif.h /<>/include/misc_c/ make[5]: Leaving directory '/<>/src/misc_c' make[5]: Entering directory '/<>/src/misc_c' Installing stable library archives make[5]: Leaving directory '/<>/src/misc_c' make[5]: Entering directory '/<>/src/misc_c' Installing tcl scripts make[5]: Leaving directory '/<>/src/misc_c' make[5]: Entering directory '/<>/src/misc_c' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/misc_c/ make[5]: Leaving directory '/<>/src/misc_c' make[5]: Entering directory '/<>/src/misc_c' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/misc_c/ make[5]: Leaving directory '/<>/src/misc_c' make[5]: Entering directory '/<>/src/misc_c' make[5]: Leaving directory '/<>/src/misc_c' make[4]: Leaving directory '/<>/src/misc_c' make[3]: Leaving directory '/<>/src/misc_c' make[2]: Leaving directory '/<>/src/misc_c' make[1]: Leaving directory '/<>/src/misc_c' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/miscvis make[1]: Entering directory '/<>/src/miscvis' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o slicer.o slicer.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o slicer slicer.o -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o overlay.o overlay.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o overlay overlay.o -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o fsl_tsplot.o fsl_tsplot.cc In file included from fsl_tsplot.cc:77: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fsl_tsplot fsl_tsplot.o -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o fsl_boxplot.o fsl_boxplot.cc In file included from fsl_boxplot.cc:77: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fsl_boxplot fsl_boxplot.o -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o fsl_histogram.o fsl_histogram.cc In file included from fsl_histogram.cc:78: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fsl_histogram fsl_histogram.o -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -o create_lut create_lut.c /bin/cp luts+pics/*.gif luts+pics/*.lut /<>/debian/tmp/etc/luts ./create_lut /<>/debian/tmp/etc/luts/render gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o writepng.o writepng.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o wpng.o wpng.c wpng.c: In function ‘main’: wpng.c:304:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result] fgets(pnmline, 256, wpng_info.infile); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ wpng.c:317:17: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result] fgets(pnmline, 256, wpng_info.infile); /* lose any comments */ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ wpng.c:321:17: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result] fgets(pnmline, 256, wpng_info.infile); /* more comment lines */ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o wpng writepng.o wpng.o -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o pngappend pngappend.cc -lutils -lnewimage -lmiscplot -lmiscpic -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lgdc -lgd -lpng -lz make[1]: Leaving directory '/<>/src/miscvis' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/miscvis install make[1]: Entering directory '/<>/src/miscvis' make[2]: Entering directory '/<>/src/miscvis' make[3]: Entering directory '/<>/src/miscvis' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/miscvis' make[3]: Entering directory '/<>/src/miscvis' make[4]: Entering directory '/<>/src/miscvis' Installing stable binaries install -p -m 0775 slicer /<>/debian/tmp/bin/ install -p -m 0775 overlay /<>/debian/tmp/bin/ install -p -m 0775 fsl_tsplot /<>/debian/tmp/bin/ install -p -m 0775 fsl_boxplot /<>/debian/tmp/bin/ install -p -m 0775 fsl_histogram /<>/debian/tmp/bin/ install -p -m 0775 create_lut /<>/debian/tmp/bin/ install -p -m 0775 wpng /<>/debian/tmp/bin/ install -p -m 0775 pngappend /<>/debian/tmp/bin/ install -p -m 0775 slices /<>/debian/tmp/bin/ install -p -m 0775 slicesdir /<>/debian/tmp/bin/ install -p -m 0775 slicesmask /<>/debian/tmp/bin/ install -p -m 0775 slices_summary /<>/debian/tmp/bin/ ln -s Runtcl Renderstats make[4]: Leaving directory '/<>/src/miscvis' make[4]: Entering directory '/<>/src/miscvis' make[5]: Entering directory '/<>/src/miscvis' Installing stable header files install -p -m 0664 readpng.h /<>/include/miscvis/ install -p -m 0664 writepng.h /<>/include/miscvis/ make[5]: Leaving directory '/<>/src/miscvis' make[5]: Entering directory '/<>/src/miscvis' Installing stable library archives make[5]: Leaving directory '/<>/src/miscvis' make[5]: Entering directory '/<>/src/miscvis' Installing tcl scripts install -p -m 0775 display.tcl /<>/debian/tmp/tcl/ install -p -m 0775 ppm2gif.tcl /<>/debian/tmp/tcl/ install -p -m 0775 renderstats.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/miscvis' make[5]: Entering directory '/<>/src/miscvis' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/miscvis/ make[5]: Leaving directory '/<>/src/miscvis' make[5]: Entering directory '/<>/src/miscvis' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/miscvis/ make[5]: Leaving directory '/<>/src/miscvis' make[5]: Entering directory '/<>/src/miscvis' make[5]: Leaving directory '/<>/src/miscvis' make[4]: Leaving directory '/<>/src/miscvis' make[3]: Leaving directory '/<>/src/miscvis' make[2]: Leaving directory '/<>/src/miscvis' make[1]: Leaving directory '/<>/src/miscvis' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/mm make[1]: Entering directory '/<>/src/mm' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o mmoptions.o mmoptions.cc In file included from mmoptions.h:77, from mmoptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o mixture_model.o mixture_model.cc In file included from mmoptions.h:77, from mixture_model.h:78, from mixture_model.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -c -o mm.o mm.cc In file included from mmoptions.h:77, from mm.cc:75: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/usr/include -I/usr/include/libpng -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o mm mmoptions.o mixture_model.o mm.o -lnewimage -lmiscmaths -lutils -lmiscplot -lmiscpic -lfslio -lniftiio -lznz -lm -lnewmat -lprob -lgdc -lgd -lpng -lz g++ -shared -o libmm.so mmoptions.o mixture_model.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lmiscpic -lnewmat -lnewimage -lmiscmaths -lfslio -lutils -lprob -lmiscplot -lgd make[1]: Leaving directory '/<>/src/mm' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/mm install make[1]: Entering directory '/<>/src/mm' make[2]: Entering directory '/<>/src/mm' make[3]: Entering directory '/<>/src/mm' g++ -shared -o libmm.so mmoptions.o mixture_model.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lmiscpic -lnewmat -lnewimage -lmiscmaths -lfslio -lutils -lprob -lmiscplot -lgd make[3]: Leaving directory '/<>/src/mm' make[3]: Entering directory '/<>/src/mm' make[4]: Entering directory '/<>/src/mm' Installing stable binaries install -p -m 0775 mm /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/mm' make[4]: Entering directory '/<>/src/mm' make[5]: Entering directory '/<>/src/mm' Installing stable header files install -p -m 0664 connected_offset.h /<>/include/mm/ install -p -m 0664 mixture_model.h /<>/include/mm/ install -p -m 0664 mmoptions.h /<>/include/mm/ make[5]: Leaving directory '/<>/src/mm' make[5]: Entering directory '/<>/src/mm' Installing stable library archives install -p -m 0664 libmm.so /<>/lib make[5]: Leaving directory '/<>/src/mm' make[5]: Entering directory '/<>/src/mm' Installing tcl scripts make[5]: Leaving directory '/<>/src/mm' make[5]: Entering directory '/<>/src/mm' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/mm/ make[5]: Leaving directory '/<>/src/mm' make[5]: Entering directory '/<>/src/mm' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/mm/ make[5]: Leaving directory '/<>/src/mm' make[5]: Entering directory '/<>/src/mm' make[5]: Leaving directory '/<>/src/mm' make[4]: Leaving directory '/<>/src/mm' make[3]: Leaving directory '/<>/src/mm' make[2]: Leaving directory '/<>/src/mm' make[1]: Leaving directory '/<>/src/mm' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/gps make[1]: Entering directory '/<>/src/gps' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o gps.o gps.cpp In file included from gps.h:20, from gps.cpp:20: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o gps gps.o -lmiscmaths -lniftiio -lznz -lutils -lnewmat -lm -lz make[1]: Leaving directory '/<>/src/gps' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/gps install make[1]: Entering directory '/<>/src/gps' make[2]: Entering directory '/<>/src/gps' make[3]: Entering directory '/<>/src/gps' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/gps' make[3]: Entering directory '/<>/src/gps' make[4]: Entering directory '/<>/src/gps' Installing stable binaries install -p -m 0775 gps /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/gps' make[4]: Entering directory '/<>/src/gps' make[5]: Entering directory '/<>/src/gps' Installing stable header files install -p -m 0664 gps.h /<>/include/gps/ make[5]: Leaving directory '/<>/src/gps' make[5]: Entering directory '/<>/src/gps' Installing stable library archives make[5]: Leaving directory '/<>/src/gps' make[5]: Entering directory '/<>/src/gps' Installing tcl scripts make[5]: Leaving directory '/<>/src/gps' make[5]: Entering directory '/<>/src/gps' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/gps/ make[5]: Leaving directory '/<>/src/gps' make[5]: Entering directory '/<>/src/gps' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/gps/ make[5]: Leaving directory '/<>/src/gps' make[5]: Entering directory '/<>/src/gps' make[5]: Leaving directory '/<>/src/gps' make[4]: Leaving directory '/<>/src/gps' make[3]: Leaving directory '/<>/src/gps' make[2]: Leaving directory '/<>/src/gps' make[1]: Leaving directory '/<>/src/gps' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/randomise make[1]: Entering directory '/<>/src/randomise' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o randomise.o randomise.cc In file included from ranopts.h:75, from randomise.cc:74: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o ranopts.o ranopts.cc In file included from ranopts.h:75, from ranopts.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o randomise randomise.o ranopts.o -lnewimage -lmiscmaths -lutils -lm -lnewmat -lfslio -lniftiio -lznz -lprob -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o fdr.o fdr.cc In file included from fdr.cc:78: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fdr fdr.o -lnewimage -lmiscmaths -lutils -lm -lnewmat -lfslio -lniftiio -lznz -lprob -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o unconfound.o unconfound.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o unconfound unconfound.o -lnewimage -lmiscmaths -lutils -lm -lnewmat -lfslio -lniftiio -lznz -lprob -lz make[1]: Leaving directory '/<>/src/randomise' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/randomise install make[1]: Entering directory '/<>/src/randomise' make[2]: Entering directory '/<>/src/randomise' make[3]: Entering directory '/<>/src/randomise' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/randomise' make[3]: Entering directory '/<>/src/randomise' make[4]: Entering directory '/<>/src/randomise' Installing stable binaries install -p -m 0775 randomise /<>/debian/tmp/bin/ install -p -m 0775 fdr /<>/debian/tmp/bin/ install -p -m 0775 unconfound /<>/debian/tmp/bin/ install -p -m 0775 design_ttest2 /<>/debian/tmp/bin/ install -p -m 0775 randomise_parallel /<>/debian/tmp/bin/ install -p -m 0775 setup_masks /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/randomise' make[4]: Entering directory '/<>/src/randomise' make[5]: Entering directory '/<>/src/randomise' Installing stable header files install -p -m 0664 ranopts.h /<>/include/randomise/ make[5]: Leaving directory '/<>/src/randomise' make[5]: Entering directory '/<>/src/randomise' Installing stable library archives make[5]: Leaving directory '/<>/src/randomise' make[5]: Entering directory '/<>/src/randomise' Installing tcl scripts make[5]: Leaving directory '/<>/src/randomise' make[5]: Entering directory '/<>/src/randomise' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/randomise/ make[5]: Leaving directory '/<>/src/randomise' make[5]: Entering directory '/<>/src/randomise' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/randomise/ make[5]: Leaving directory '/<>/src/randomise' make[5]: Entering directory '/<>/src/randomise' make[5]: Leaving directory '/<>/src/randomise' make[4]: Leaving directory '/<>/src/randomise' make[3]: Leaving directory '/<>/src/randomise' make[2]: Leaving directory '/<>/src/randomise' make[1]: Leaving directory '/<>/src/randomise' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/siena make[1]: Entering directory '/<>/src/siena' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -O0 -o siena_diff siena_diff.cc -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz siena_diff.cc: In function ‘int main(int, char**)’: siena_diff.cc:212:19: warning: ‘/bin/flirt -o ’ directive writing 14 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(thestring,"%s/bin/flirt -o %s_halfwayto_%s -applyisoxfm 1 -paddingsize 0 -init %s_halfwayto_%s.mat -ref %s -in %s", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ siena_diff.cc:212:8: note: ‘sprintf’ output 89 or more bytes (assuming 10088) into a destination of size 10000 sprintf(thestring,"%s/bin/flirt -o %s_halfwayto_%s -applyisoxfm 1 -paddingsize 0 -init %s_halfwayto_%s.mat -ref %s -in %s", ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fsldir,argv[1],argv[2],argv[1],argv[2],argv[1],argv[1]); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ siena_diff.cc:216:19: warning: ‘/bin/flirt -o ’ directive writing 14 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(thestring,"%s/bin/flirt -o %s_halfwayto_%s -applyisoxfm 1 -paddingsize 0 -init %s_halfwayto_%s.mat -ref %s -in %s", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ siena_diff.cc:216:8: note: ‘sprintf’ output 89 or more bytes (assuming 10088) into a destination of size 10000 sprintf(thestring,"%s/bin/flirt -o %s_halfwayto_%s -applyisoxfm 1 -paddingsize 0 -init %s_halfwayto_%s.mat -ref %s -in %s", ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fsldir,argv[2],argv[1],argv[2],argv[1],argv[1],argv[2]); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ siena_diff.cc:220:19: warning: ‘/bin/flirt -o ’ directive writing 14 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(thestring,"%s/bin/flirt -o %s_halfwayto_%s_mask -applyisoxfm 1 -paddingsize 0 -init %s_halfwayto_%s.mat -ref %s -in %s_brain_mask", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ siena_diff.cc:220:8: note: ‘sprintf’ output 105 or more bytes (assuming 10104) into a destination of size 10000 sprintf(thestring,"%s/bin/flirt -o %s_halfwayto_%s_mask -applyisoxfm 1 -paddingsize 0 -init %s_halfwayto_%s.mat -ref %s -in %s_brain_mask", ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fsldir,argv[1],argv[2],argv[1],argv[2],argv[1],argv[1]); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ siena_diff.cc:224:19: warning: ‘/bin/flirt -o ’ directive writing 14 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(thestring,"%s/bin/flirt -o %s_halfwayto_%s_mask -applyisoxfm 1 -paddingsize 0 -init %s_halfwayto_%s.mat -ref %s -in %s_brain_mask", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ siena_diff.cc:224:8: note: ‘sprintf’ output 105 or more bytes (assuming 10104) into a destination of size 10000 sprintf(thestring,"%s/bin/flirt -o %s_halfwayto_%s_mask -applyisoxfm 1 -paddingsize 0 -init %s_halfwayto_%s.mat -ref %s -in %s_brain_mask", ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fsldir,argv[2],argv[1],argv[2],argv[1],argv[1],argv[2]); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ siena_diff.cc:230:21: warning: ‘/bin/flirt -o ’ directive writing 14 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(thestring,"%s/bin/flirt -o %s_halfwayto_%s_valid_mask -applyisoxfm 1 -paddingsize 0 -init %s_halfwayto_%s.mat -ref %s -in %s_valid_mask_with_%s", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ siena_diff.cc:230:10: note: ‘sprintf’ output 117 or more bytes (assuming 10116) into a destination of size 10000 sprintf(thestring,"%s/bin/flirt -o %s_halfwayto_%s_valid_mask -applyisoxfm 1 -paddingsize 0 -init %s_halfwayto_%s.mat -ref %s -in %s_valid_mask_with_%s", ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fsldir,argv[1],argv[2],argv[1],argv[2],argv[1],argv[1],argv[2]); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ siena_diff.cc:290:23: warning: ‘/bin/fast ’ directive writing 10 bytes into a region of size between 1 and 10000 [-Wformat-overflow=] sprintf(thestring,"%s/bin/fast %s %s %s_halfwayto_%s_brain > %s_halfwayto_%s_brain.vol 2>&1", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ siena_diff.cc:290:12: note: ‘sprintf’ output 59 or more bytes (assuming 20156) into a destination of size 10000 sprintf(thestring,"%s/bin/fast %s %s %s_halfwayto_%s_brain > %s_halfwayto_%s_brain.vol 2>&1", ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fsldir,segtype,segoptions,argv[1],argv[2],argv[1],argv[2]); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/<>/src/siena' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/siena install make[1]: Entering directory '/<>/src/siena' make[2]: Entering directory '/<>/src/siena' make[3]: Entering directory '/<>/src/siena' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/siena' make[3]: Entering directory '/<>/src/siena' make[4]: Entering directory '/<>/src/siena' Installing stable binaries install -p -m 0775 siena_diff /<>/debian/tmp/bin/ install -p -m 0775 siena /<>/debian/tmp/bin/ install -p -m 0775 siena_flirt /<>/debian/tmp/bin/ install -p -m 0775 siena_cal /<>/debian/tmp/bin/ install -p -m 0775 sienax /<>/debian/tmp/bin/ install -p -m 0775 siena_flow2std /<>/debian/tmp/bin/ install -p -m 0775 viena_quant /<>/debian/tmp/bin/ install -p -m 0775 viena_createpng /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/siena' make[4]: Entering directory '/<>/src/siena' make[5]: Entering directory '/<>/src/siena' Installing stable header files make[5]: Leaving directory '/<>/src/siena' make[5]: Entering directory '/<>/src/siena' Installing stable library archives make[5]: Leaving directory '/<>/src/siena' make[5]: Entering directory '/<>/src/siena' Installing tcl scripts make[5]: Leaving directory '/<>/src/siena' make[5]: Entering directory '/<>/src/siena' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/siena/ make[5]: Leaving directory '/<>/src/siena' make[5]: Entering directory '/<>/src/siena' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/siena/ make[5]: Leaving directory '/<>/src/siena' make[5]: Entering directory '/<>/src/siena' make[5]: Leaving directory '/<>/src/siena' make[4]: Leaving directory '/<>/src/siena' make[3]: Leaving directory '/<>/src/siena' make[2]: Leaving directory '/<>/src/siena' make[1]: Leaving directory '/<>/src/siena' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/slicetimer make[1]: Entering directory '/<>/src/slicetimer' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o slicetimer.o slicetimer.cc In file included from slicetimer.cc:83: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o slicetimer slicetimer.o -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lprob -lm -lutils -lz make[1]: Leaving directory '/<>/src/slicetimer' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/slicetimer install make[1]: Entering directory '/<>/src/slicetimer' make[2]: Entering directory '/<>/src/slicetimer' make[3]: Entering directory '/<>/src/slicetimer' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/slicetimer' make[3]: Entering directory '/<>/src/slicetimer' make[4]: Entering directory '/<>/src/slicetimer' Installing stable binaries install -p -m 0775 slicetimer /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/slicetimer' make[4]: Entering directory '/<>/src/slicetimer' make[5]: Entering directory '/<>/src/slicetimer' Installing stable header files make[5]: Leaving directory '/<>/src/slicetimer' make[5]: Entering directory '/<>/src/slicetimer' Installing stable library archives make[5]: Leaving directory '/<>/src/slicetimer' make[5]: Entering directory '/<>/src/slicetimer' Installing tcl scripts make[5]: Leaving directory '/<>/src/slicetimer' make[5]: Entering directory '/<>/src/slicetimer' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/slicetimer/ make[5]: Leaving directory '/<>/src/slicetimer' make[5]: Entering directory '/<>/src/slicetimer' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/slicetimer/ make[5]: Leaving directory '/<>/src/slicetimer' make[5]: Entering directory '/<>/src/slicetimer' make[5]: Leaving directory '/<>/src/slicetimer' make[4]: Leaving directory '/<>/src/slicetimer' make[3]: Leaving directory '/<>/src/slicetimer' make[2]: Leaving directory '/<>/src/slicetimer' make[1]: Leaving directory '/<>/src/slicetimer' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/susan make[1]: Entering directory '/<>/src/susan' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -c -o susan.o susan.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o susan susan.o -lnewimage -lmiscmaths -lfslio -lnewmat -lutils -lniftiio -lznz -lm -lz make[1]: Leaving directory '/<>/src/susan' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/susan install make[1]: Entering directory '/<>/src/susan' make[2]: Entering directory '/<>/src/susan' make[3]: Entering directory '/<>/src/susan' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/susan' make[3]: Entering directory '/<>/src/susan' make[4]: Entering directory '/<>/src/susan' Installing stable binaries install -p -m 0775 susan /<>/debian/tmp/bin/ ln -s Runtcl Susan make[4]: Leaving directory '/<>/src/susan' make[4]: Entering directory '/<>/src/susan' make[5]: Entering directory '/<>/src/susan' Installing stable header files make[5]: Leaving directory '/<>/src/susan' make[5]: Entering directory '/<>/src/susan' Installing stable library archives make[5]: Leaving directory '/<>/src/susan' make[5]: Entering directory '/<>/src/susan' Installing tcl scripts install -p -m 0775 susan.tcl /<>/debian/tmp/tcl/ install -p -m 0775 susan_proc.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/susan' make[5]: Entering directory '/<>/src/susan' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/susan/ make[5]: Leaving directory '/<>/src/susan' make[5]: Entering directory '/<>/src/susan' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/susan/ make[5]: Leaving directory '/<>/src/susan' make[5]: Entering directory '/<>/src/susan' make[5]: Leaving directory '/<>/src/susan' make[4]: Leaving directory '/<>/src/susan' make[3]: Leaving directory '/<>/src/susan' make[2]: Leaving directory '/<>/src/susan' make[1]: Leaving directory '/<>/src/susan' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/tbss make[1]: Entering directory '/<>/src/tbss' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o distancemap distancemap.cc -lnewimage -lmiscmaths -lprob -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz In file included from distancemap.cc:70: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o tbss_skeleton tbss_skeleton.cc -lnewimage -lmiscmaths -lprob -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz In file included from tbss_skeleton.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o swap_voxelwise swap_voxelwise.cc -lnewimage -lmiscmaths -lprob -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz In file included from swap_voxelwise.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o swap_subjectwise swap_subjectwise.cc -lnewimage -lmiscmaths -lprob -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz In file included from swap_subjectwise.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ make[1]: Leaving directory '/<>/src/tbss' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/tbss install make[1]: Entering directory '/<>/src/tbss' make[2]: Entering directory '/<>/src/tbss' make[3]: Entering directory '/<>/src/tbss' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/tbss' make[3]: Entering directory '/<>/src/tbss' make[4]: Entering directory '/<>/src/tbss' Installing stable binaries install -p -m 0775 distancemap /<>/debian/tmp/bin/ install -p -m 0775 tbss_skeleton /<>/debian/tmp/bin/ install -p -m 0775 swap_voxelwise /<>/debian/tmp/bin/ install -p -m 0775 swap_subjectwise /<>/debian/tmp/bin/ install -p -m 0775 tbss_1_preproc /<>/debian/tmp/bin/ install -p -m 0775 tbss_2_reg /<>/debian/tmp/bin/ install -p -m 0775 tbss_3_postreg /<>/debian/tmp/bin/ install -p -m 0775 tbss_4_prestats /<>/debian/tmp/bin/ install -p -m 0775 fsl_reg /<>/debian/tmp/bin/ install -p -m 0775 tbss_non_FA /<>/debian/tmp/bin/ install -p -m 0775 tbss_fill /<>/debian/tmp/bin/ install -p -m 0775 tbss_deproject /<>/debian/tmp/bin/ install -p -m 0775 tbss_sym /<>/debian/tmp/bin/ install -p -m 0775 tbss_x /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/tbss' make[4]: Entering directory '/<>/src/tbss' make[5]: Entering directory '/<>/src/tbss' Installing stable header files make[5]: Leaving directory '/<>/src/tbss' make[5]: Entering directory '/<>/src/tbss' Installing stable library archives make[5]: Leaving directory '/<>/src/tbss' make[5]: Entering directory '/<>/src/tbss' Installing tcl scripts make[5]: Leaving directory '/<>/src/tbss' make[5]: Entering directory '/<>/src/tbss' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/tbss/ make[5]: Leaving directory '/<>/src/tbss' make[5]: Entering directory '/<>/src/tbss' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/tbss/ make[5]: Leaving directory '/<>/src/tbss' make[5]: Entering directory '/<>/src/tbss' make[5]: Leaving directory '/<>/src/tbss' make[4]: Leaving directory '/<>/src/tbss' make[3]: Leaving directory '/<>/src/tbss' make[2]: Leaving directory '/<>/src/tbss' make[1]: Leaving directory '/<>/src/tbss' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fnirt make[1]: Entering directory '/<>/src/fnirt' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o fnirt_costfunctions.o fnirt_costfunctions.cpp In file included from fnirtfns.h:83, from fnirt_costfunctions.cpp:93: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o intensity_mappers.o intensity_mappers.cpp In file included from fnirtfns.h:83, from intensity_mappers.cpp:84: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o matching_points.o matching_points.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o fnirtfns.o fnirtfns.cpp In file included from fnirtfns.cpp:83: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o fnirt.o fnirt.cpp In file included from fnirtfns.h:83, from fnirt.cpp:93: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fnirt fnirt_costfunctions.o intensity_mappers.o matching_points.o fnirtfns.o fnirt.o -lwarpfns -lmeshclass -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lutils -lnewmat -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o new_invwarp.o new_invwarp.cc In file included from new_invwarp.cc:70: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ In file included from new_invwarp.cc:75: tetrahedron.h: In member function ‘void Tetrahedron::get_point(double, double, double, double&, double&, double&)’: tetrahedron.h:477:15: warning: narrowing conversion of ‘((Tetrahedron*)this)->Tetrahedron::_i1’ from ‘int’ to ‘RBD_COMMON::Real’ {aka ‘double’} inside { } [-Wnarrowing] Real b[] = {_i1,_j1,_k1,_i2,_j2,_k2,_i3,_j3,_k3,_i4,_j4,_k4}; ^~~ tetrahedron.h:477:19: warning: narrowing conversion of ‘((Tetrahedron*)this)->Tetrahedron::_j1’ from ‘int’ to ‘RBD_COMMON::Real’ {aka ‘double’} inside { } [-Wnarrowing] Real b[] = {_i1,_j1,_k1,_i2,_j2,_k2,_i3,_j3,_k3,_i4,_j4,_k4}; ^~~ tetrahedron.h:477:23: warning: narrowing conversion of ‘((Tetrahedron*)this)->Tetrahedron::_k1’ from ‘int’ to ‘RBD_COMMON::Real’ {aka ‘double’} inside { } [-Wnarrowing] Real b[] = {_i1,_j1,_k1,_i2,_j2,_k2,_i3,_j3,_k3,_i4,_j4,_k4}; ^~~ tetrahedron.h:477:27: warning: narrowing conversion of ‘((Tetrahedron*)this)->Tetrahedron::_i2’ from ‘int’ to ‘RBD_COMMON::Real’ {aka ‘double’} inside { } [-Wnarrowing] Real b[] = {_i1,_j1,_k1,_i2,_j2,_k2,_i3,_j3,_k3,_i4,_j4,_k4}; ^~~ tetrahedron.h:477:31: warning: narrowing conversion of ‘((Tetrahedron*)this)->Tetrahedron::_j2’ from ‘int’ to ‘RBD_COMMON::Real’ {aka ‘double’} inside { } [-Wnarrowing] Real b[] = {_i1,_j1,_k1,_i2,_j2,_k2,_i3,_j3,_k3,_i4,_j4,_k4}; ^~~ tetrahedron.h:477:35: warning: narrowing conversion of ‘((Tetrahedron*)this)->Tetrahedron::_k2’ from ‘int’ to ‘RBD_COMMON::Real’ {aka ‘double’} inside { } [-Wnarrowing] Real b[] = {_i1,_j1,_k1,_i2,_j2,_k2,_i3,_j3,_k3,_i4,_j4,_k4}; ^~~ tetrahedron.h:477:39: warning: narrowing conversion of ‘((Tetrahedron*)this)->Tetrahedron::_i3’ from ‘int’ to ‘RBD_COMMON::Real’ {aka ‘double’} inside { } [-Wnarrowing] Real b[] = {_i1,_j1,_k1,_i2,_j2,_k2,_i3,_j3,_k3,_i4,_j4,_k4}; ^~~ tetrahedron.h:477:43: warning: narrowing conversion of ‘((Tetrahedron*)this)->Tetrahedron::_j3’ from ‘int’ to ‘RBD_COMMON::Real’ {aka ‘double’} inside { } [-Wnarrowing] Real b[] = {_i1,_j1,_k1,_i2,_j2,_k2,_i3,_j3,_k3,_i4,_j4,_k4}; ^~~ tetrahedron.h:477:47: warning: narrowing conversion of ‘((Tetrahedron*)this)->Tetrahedron::_k3’ from ‘int’ to ‘RBD_COMMON::Real’ {aka ‘double’} inside { } [-Wnarrowing] Real b[] = {_i1,_j1,_k1,_i2,_j2,_k2,_i3,_j3,_k3,_i4,_j4,_k4}; ^~~ tetrahedron.h:477:51: warning: narrowing conversion of ‘((Tetrahedron*)this)->Tetrahedron::_i4’ from ‘int’ to ‘RBD_COMMON::Real’ {aka ‘double’} inside { } [-Wnarrowing] Real b[] = {_i1,_j1,_k1,_i2,_j2,_k2,_i3,_j3,_k3,_i4,_j4,_k4}; ^~~ tetrahedron.h:477:55: warning: narrowing conversion of ‘((Tetrahedron*)this)->Tetrahedron::_j4’ from ‘int’ to ‘RBD_COMMON::Real’ {aka ‘double’} inside { } [-Wnarrowing] Real b[] = {_i1,_j1,_k1,_i2,_j2,_k2,_i3,_j3,_k3,_i4,_j4,_k4}; ^~~ tetrahedron.h:477:59: warning: narrowing conversion of ‘((Tetrahedron*)this)->Tetrahedron::_k4’ from ‘int’ to ‘RBD_COMMON::Real’ {aka ‘double’} inside { } [-Wnarrowing] Real b[] = {_i1,_j1,_k1,_i2,_j2,_k2,_i3,_j3,_k3,_i4,_j4,_k4}; ^~~ g++ -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o new_invwarp new_invwarp.o -lwarpfns -lmeshclass -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lutils -lnewmat -lm -lz /bin/cp -rf fnirtcnf/* /<>/debian/tmp/etc/flirtsch/. make[1]: Leaving directory '/<>/src/fnirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fnirt install make[1]: Entering directory '/<>/src/fnirt' make[2]: Entering directory '/<>/src/fnirt' make[3]: Entering directory '/<>/src/fnirt' /bin/cp -rf fnirtcnf/* /<>/debian/tmp/etc/flirtsch/. make[3]: Leaving directory '/<>/src/fnirt' make[3]: Entering directory '/<>/src/fnirt' make[4]: Entering directory '/<>/src/fnirt' Installing stable binaries install -p -m 0775 fnirt /<>/debian/tmp/bin/ install -p -m 0775 new_invwarp /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/fnirt' make[4]: Entering directory '/<>/src/fnirt' make[5]: Entering directory '/<>/src/fnirt' Installing stable header files install -p -m 0664 dilator.h /<>/include/fnirt/ install -p -m 0664 fnirt_costfunctions.h /<>/include/fnirt/ install -p -m 0664 fnirtfns.h /<>/include/fnirt/ install -p -m 0664 intensity_mappers.h /<>/include/fnirt/ install -p -m 0664 matching_points.h /<>/include/fnirt/ install -p -m 0664 phase.h /<>/include/fnirt/ install -p -m 0664 tetrahedron.h /<>/include/fnirt/ make[5]: Leaving directory '/<>/src/fnirt' make[5]: Entering directory '/<>/src/fnirt' Installing stable library archives make[5]: Leaving directory '/<>/src/fnirt' make[5]: Entering directory '/<>/src/fnirt' Installing tcl scripts make[5]: Leaving directory '/<>/src/fnirt' make[5]: Entering directory '/<>/src/fnirt' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fnirt/ make[5]: Leaving directory '/<>/src/fnirt' make[5]: Entering directory '/<>/src/fnirt' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fnirt/ make[5]: Leaving directory '/<>/src/fnirt' make[5]: Entering directory '/<>/src/fnirt' make[5]: Leaving directory '/<>/src/fnirt' make[4]: Leaving directory '/<>/src/fnirt' make[3]: Leaving directory '/<>/src/fnirt' make[2]: Leaving directory '/<>/src/fnirt' make[1]: Leaving directory '/<>/src/fnirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fugue make[1]: Entering directory '/<>/src/fugue' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o prelude.o prelude.cc In file included from prelude.cc:70: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o unwarpfns.o unwarpfns.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o prelude prelude.o unwarpfns.o -lwarpfns -lbasisfield -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o fugue.o fugue.cc In file included from fugue.cc:74: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fugue fugue.o unwarpfns.o -lwarpfns -lbasisfield -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o applywarp.o applywarp.cc In file included from applywarp.cc:70: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o applywarp applywarp.o -lwarpfns -lbasisfield -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o convertwarp.o convertwarp.cc In file included from convertwarp.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o convertwarp convertwarp.o -lwarpfns -lbasisfield -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o sigloss.o sigloss.cc In file included from sigloss.cc:77: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o sigloss sigloss.o -lwarpfns -lbasisfield -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o invwarp.o invwarp.cc In file included from invwarp.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o invwarp_exe invwarp.o unwarpfns.o -lwarpfns -lbasisfield -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o fnirtfileutils.o fnirtfileutils.cpp In file included from fnirtfileutils.cpp:75: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fnirtfileutils fnirtfileutils.o -lwarpfns -lbasisfield -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz make[1]: Leaving directory '/<>/src/fugue' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fugue install make[1]: Entering directory '/<>/src/fugue' make[2]: Entering directory '/<>/src/fugue' make[3]: Entering directory '/<>/src/fugue' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/fugue' make[3]: Entering directory '/<>/src/fugue' make[4]: Entering directory '/<>/src/fugue' Installing stable binaries install -p -m 0775 prelude /<>/debian/tmp/bin/ install -p -m 0775 fugue /<>/debian/tmp/bin/ install -p -m 0775 applywarp /<>/debian/tmp/bin/ install -p -m 0775 convertwarp /<>/debian/tmp/bin/ install -p -m 0775 sigloss /<>/debian/tmp/bin/ install -p -m 0775 invwarp_exe /<>/debian/tmp/bin/ install -p -m 0775 fnirtfileutils /<>/debian/tmp/bin/ install -p -m 0775 fsl_prepare_fieldmap /<>/debian/tmp/bin/ install -p -m 0775 extractfidparams /<>/debian/tmp/bin/ install -p -m 0775 invwarp /<>/debian/tmp/bin/ ln -s Runtcl Fsl_prepare_fieldmap make[4]: Leaving directory '/<>/src/fugue' make[4]: Entering directory '/<>/src/fugue' make[5]: Entering directory '/<>/src/fugue' Installing stable header files install -p -m 0664 unwarpfns.h /<>/include/fugue/ make[5]: Leaving directory '/<>/src/fugue' make[5]: Entering directory '/<>/src/fugue' Installing stable library archives make[5]: Leaving directory '/<>/src/fugue' make[5]: Entering directory '/<>/src/fugue' Installing tcl scripts install -p -m 0775 fsl_prepare_fieldmap.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/fugue' make[5]: Entering directory '/<>/src/fugue' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fugue/ make[5]: Leaving directory '/<>/src/fugue' make[5]: Entering directory '/<>/src/fugue' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fugue/ make[5]: Leaving directory '/<>/src/fugue' make[5]: Entering directory '/<>/src/fugue' make[5]: Leaving directory '/<>/src/fugue' make[4]: Leaving directory '/<>/src/fugue' make[3]: Leaving directory '/<>/src/fugue' make[2]: Leaving directory '/<>/src/fugue' make[1]: Leaving directory '/<>/src/fugue' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/asl_mfree make[1]: Entering directory '/<>/src/asl_mfree' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -c -o readoptions.o readoptions.cc In file included from readoptions.h:77, from readoptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -c -o asl_mfree_functions.o asl_mfree_functions.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -c -o asl_mfree.o asl_mfree.cc In file included from readoptions.h:77, from asl_mfree.cc:79: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o asl_mfree readoptions.o asl_mfree_functions.o asl_mfree.o -lutils -lnewimage -lmiscmaths -lm -lnewmat -lfslio -lniftiio -lprob -lznz -lz make[1]: Leaving directory '/<>/src/asl_mfree' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/asl_mfree install make[1]: Entering directory '/<>/src/asl_mfree' make[2]: Entering directory '/<>/src/asl_mfree' make[3]: Entering directory '/<>/src/asl_mfree' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/asl_mfree' make[3]: Entering directory '/<>/src/asl_mfree' make[4]: Entering directory '/<>/src/asl_mfree' Installing stable binaries install -p -m 0775 asl_mfree /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/asl_mfree' make[4]: Entering directory '/<>/src/asl_mfree' make[5]: Entering directory '/<>/src/asl_mfree' Installing stable header files install -p -m 0664 asl_mfree_functions.h /<>/include/asl_mfree/ install -p -m 0664 readoptions.h /<>/include/asl_mfree/ make[5]: Leaving directory '/<>/src/asl_mfree' make[5]: Entering directory '/<>/src/asl_mfree' Installing stable library archives make[5]: Leaving directory '/<>/src/asl_mfree' make[5]: Entering directory '/<>/src/asl_mfree' Installing tcl scripts make[5]: Leaving directory '/<>/src/asl_mfree' make[5]: Entering directory '/<>/src/asl_mfree' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/asl_mfree/ make[5]: Leaving directory '/<>/src/asl_mfree' make[5]: Entering directory '/<>/src/asl_mfree' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/asl_mfree/ make[5]: Leaving directory '/<>/src/asl_mfree' make[5]: Entering directory '/<>/src/asl_mfree' make[5]: Leaving directory '/<>/src/asl_mfree' make[4]: Leaving directory '/<>/src/asl_mfree' make[3]: Leaving directory '/<>/src/asl_mfree' make[2]: Leaving directory '/<>/src/asl_mfree' make[1]: Leaving directory '/<>/src/asl_mfree' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_scripts make[1]: Entering directory '/<>/src/misc_scripts' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/misc_scripts' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_scripts install make[1]: Entering directory '/<>/src/misc_scripts' make[2]: Entering directory '/<>/src/misc_scripts' make[3]: Entering directory '/<>/src/misc_scripts' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/misc_scripts' make[3]: Entering directory '/<>/src/misc_scripts' make[4]: Entering directory '/<>/src/misc_scripts' Installing stable binaries install -p -m 0775 fslecho /<>/debian/tmp/bin/ install -p -m 0775 Text2Vest /<>/debian/tmp/bin/ install -p -m 0775 Vest2Text /<>/debian/tmp/bin/ install -p -m 0775 AnatomicalAverage /<>/debian/tmp/bin/ install -p -m 0775 fsl_abspath /<>/debian/tmp/bin/ install -p -m 0775 fsl_anat /<>/debian/tmp/bin/ install -p -m 0775 fslFixText /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/misc_scripts' make[4]: Entering directory '/<>/src/misc_scripts' make[5]: Entering directory '/<>/src/misc_scripts' Installing stable header files make[5]: Leaving directory '/<>/src/misc_scripts' make[5]: Entering directory '/<>/src/misc_scripts' Installing stable library archives make[5]: Leaving directory '/<>/src/misc_scripts' make[5]: Entering directory '/<>/src/misc_scripts' Installing tcl scripts make[5]: Leaving directory '/<>/src/misc_scripts' make[5]: Entering directory '/<>/src/misc_scripts' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/misc_scripts/ make[5]: Leaving directory '/<>/src/misc_scripts' make[5]: Entering directory '/<>/src/misc_scripts' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/misc_scripts/ make[5]: Leaving directory '/<>/src/misc_scripts' make[5]: Entering directory '/<>/src/misc_scripts' make[5]: Leaving directory '/<>/src/misc_scripts' make[4]: Leaving directory '/<>/src/misc_scripts' make[3]: Leaving directory '/<>/src/misc_scripts' make[2]: Leaving directory '/<>/src/misc_scripts' make[1]: Leaving directory '/<>/src/misc_scripts' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fdt make[1]: Entering directory '/<>/src/fdt' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o dtifit.o dtifit.cc In file included from dtifitOptions.h:77, from dtifit.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o dtifitOptions.o dtifitOptions.cc In file included from dtifitOptions.h:77, from dtifitOptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o diffmodels.o diffmodels.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o Bingham_Watson_approx.o Bingham_Watson_approx.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o dtifit dtifit.o dtifitOptions.o diffmodels.o Bingham_Watson_approx.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o ccops.o ccops.cc In file included from ccopsOptions.h:77, from ccops.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o ccopsOptions.o ccopsOptions.cc In file included from ccopsOptions.h:77, from ccopsOptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o ccops ccops.o ccopsOptions.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o medianfilter.o medianfilter.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o medianfilter medianfilter.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o make_dyadic_vectors.o make_dyadic_vectors.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o make_dyadic_vectors make_dyadic_vectors.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o vecreg.o vecreg.cc In file included from vecreg.cc:70: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o vecreg vecreg.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o xfibres.o xfibres.cc In file included from xfibresoptions.h:77, from xfibres.cc:84: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o xfibresoptions.o xfibresoptions.cc In file included from xfibresoptions.h:77, from xfibresoptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o xfibres xfibres.o xfibresoptions.o diffmodels.o Bingham_Watson_approx.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o probtrackx.o probtrackx.cc In file included from probtrackxOptions.h:77, from probtrackx.h:65, from probtrackx.cc:70: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o probtrackxOptions.o probtrackxOptions.cc In file included from probtrackxOptions.h:77, from probtrackxOptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o streamlines.o streamlines.cc In file included from probtrackxOptions.h:77, from streamlines.h:71, from streamlines.cc:65: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o ptx_simple.o ptx_simple.cc In file included from probtrackxOptions.h:77, from ptx_simple.h:69, from ptx_simple.cc:65: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o ptx_seedmask.o ptx_seedmask.cc In file included from probtrackxOptions.h:77, from ptx_seedmask.h:69, from ptx_seedmask.cc:65: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o ptx_twomasks.o ptx_twomasks.cc In file included from probtrackxOptions.h:77, from ptx_twomasks.h:69, from ptx_twomasks.cc:65: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o ptx_nmasks.o ptx_nmasks.cc In file included from probtrackxOptions.h:77, from ptx_nmasks.h:69, from ptx_nmasks.cc:65: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o ptx_meshmask.o ptx_meshmask.cc In file included from probtrackxOptions.h:77, from ptx_meshmask.h:69, from ptx_meshmask.cc:66: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o probtrackx probtrackx.o probtrackxOptions.o streamlines.o ptx_simple.o ptx_seedmask.o ptx_twomasks.o ptx_nmasks.o ptx_meshmask.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o pvmfit.o pvmfit.cc In file included from pvmfitOptions.h:77, from pvmfit.cc:72: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o pvmfitOptions.o pvmfitOptions.cc In file included from pvmfitOptions.h:77, from pvmfitOptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o pvmfit pvmfit.o pvmfitOptions.o diffmodels.o Bingham_Watson_approx.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o dtigen.o dtigen.cc In file included from dtigen.cc:67: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o dtigen dtigen.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o eddy_combine.o eddy_combine.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o eddy_combine eddy_combine.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o reord_OM.o reord_OM.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o reord_OM reord_OM.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o sausages.o sausages.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o sausages sausages.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o replacevols.o replacevols.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o replacevols replacevols.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o fdt_matrix_ops.o fdt_matrix_ops.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fdt_matrix_ops fdt_matrix_ops.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o indexer.o indexer.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o indexer indexer.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o rearrange.o rearrange.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o rearrange rearrange.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o xfibres_pred.o xfibres_pred.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o xfibres_pred xfibres_pred.o -lwarpfns -lbasisfield -lmeshclass -lbint -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lprob -lm -lz make[1]: Leaving directory '/<>/src/fdt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fdt install make[1]: Entering directory '/<>/src/fdt' make[2]: Entering directory '/<>/src/fdt' make[3]: Entering directory '/<>/src/fdt' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/fdt' make[3]: Entering directory '/<>/src/fdt' make[4]: Entering directory '/<>/src/fdt' Installing stable binaries install -p -m 0775 dtifit /<>/debian/tmp/bin/ install -p -m 0775 ccops /<>/debian/tmp/bin/ install -p -m 0775 medianfilter /<>/debian/tmp/bin/ install -p -m 0775 make_dyadic_vectors /<>/debian/tmp/bin/ install -p -m 0775 vecreg /<>/debian/tmp/bin/ install -p -m 0775 xfibres /<>/debian/tmp/bin/ install -p -m 0775 probtrackx /<>/debian/tmp/bin/ install -p -m 0775 pvmfit /<>/debian/tmp/bin/ install -p -m 0775 dtigen /<>/debian/tmp/bin/ install -p -m 0775 eddy_combine /<>/debian/tmp/bin/ install -p -m 0775 eddy_correct /<>/debian/tmp/bin/ install -p -m 0775 zeropad /<>/debian/tmp/bin/ install -p -m 0775 maskdyads /<>/debian/tmp/bin/ install -p -m 0775 probtrack /<>/debian/tmp/bin/ install -p -m 0775 fdt_rotate_bvecs /<>/debian/tmp/bin/ install -p -m 0775 bedpost /<>/debian/tmp/bin/ install -p -m 0775 bedpostx /<>/debian/tmp/bin/ install -p -m 0775 bedpostx_postproc.sh /<>/debian/tmp/bin/ install -p -m 0775 bedpostx_preproc.sh /<>/debian/tmp/bin/ install -p -m 0775 bedpostx_single_slice.sh /<>/debian/tmp/bin/ install -p -m 0775 bedpostx_datacheck /<>/debian/tmp/bin/ ln -s Runtcl Fdt make[4]: Leaving directory '/<>/src/fdt' make[4]: Entering directory '/<>/src/fdt' make[5]: Entering directory '/<>/src/fdt' Installing stable header files install -p -m 0664 Bingham_Watson_approx.h /<>/include/fdt/ install -p -m 0664 ccopsOptions.h /<>/include/fdt/ install -p -m 0664 commonopts.h /<>/include/fdt/ install -p -m 0664 diff_pvmoptions.h /<>/include/fdt/ install -p -m 0664 diffmodels.h /<>/include/fdt/ install -p -m 0664 dtifitOptions.h /<>/include/fdt/ install -p -m 0664 fibre.h /<>/include/fdt/ install -p -m 0664 particle.h /<>/include/fdt/ install -p -m 0664 probtrackx.h /<>/include/fdt/ install -p -m 0664 probtrackxOptions.h /<>/include/fdt/ install -p -m 0664 ptx_meshmask.h /<>/include/fdt/ install -p -m 0664 ptx_nmasks.h /<>/include/fdt/ install -p -m 0664 ptx_seedmask.h /<>/include/fdt/ install -p -m 0664 ptx_simple.h /<>/include/fdt/ install -p -m 0664 ptx_twomasks.h /<>/include/fdt/ install -p -m 0664 pvmfitOptions.h /<>/include/fdt/ install -p -m 0664 streamlines.h /<>/include/fdt/ install -p -m 0664 tractOptions.h /<>/include/fdt/ install -p -m 0664 tractOpts.h /<>/include/fdt/ install -p -m 0664 tractvols.h /<>/include/fdt/ install -p -m 0664 tractvolsx.h /<>/include/fdt/ install -p -m 0664 vecreg.h /<>/include/fdt/ install -p -m 0664 xfibresoptions.h /<>/include/fdt/ make[5]: Leaving directory '/<>/src/fdt' make[5]: Entering directory '/<>/src/fdt' Installing stable library archives make[5]: Leaving directory '/<>/src/fdt' make[5]: Entering directory '/<>/src/fdt' Installing tcl scripts install -p -m 0775 fdt.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/fdt' make[5]: Entering directory '/<>/src/fdt' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fdt/ make[5]: Leaving directory '/<>/src/fdt' make[5]: Entering directory '/<>/src/fdt' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fdt/ make[5]: Leaving directory '/<>/src/fdt' make[5]: Entering directory '/<>/src/fdt' make[5]: Leaving directory '/<>/src/fdt' make[4]: Leaving directory '/<>/src/fdt' make[3]: Leaving directory '/<>/src/fdt' make[2]: Leaving directory '/<>/src/fdt' make[1]: Leaving directory '/<>/src/fdt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/first make[1]: Entering directory '/<>/src/first' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -c -o first.o first.cc In file included from first.cc:77: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o first first.o -lshapeModel -lfirst_lib -lfslvtkio -lmeshclass -lnewimage -lprob -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -c -o first_utils.o first_utils.cc In file included from first_utils.cc:70: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o first_utils first_utils.o -lshapeModel -lfirst_lib -lfslvtkio -lmeshclass -lnewimage -lprob -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -c -o first_mult_bcorr.o first_mult_bcorr.cc In file included from first_mult_bcorr.cc:77: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o first_mult_bcorr first_mult_bcorr.o -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz make[1]: Leaving directory '/<>/src/first' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/first install make[1]: Entering directory '/<>/src/first' make[2]: Entering directory '/<>/src/first' make[3]: Entering directory '/<>/src/first' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/first' make[3]: Entering directory '/<>/src/first' make[4]: Entering directory '/<>/src/first' Installing stable binaries install -p -m 0775 first /<>/debian/tmp/bin/ install -p -m 0775 first_utils /<>/debian/tmp/bin/ install -p -m 0775 first_mult_bcorr /<>/debian/tmp/bin/ install -p -m 0775 run_first /<>/debian/tmp/bin/ install -p -m 0775 run_first_all /<>/debian/tmp/bin/ install -p -m 0775 first_flirt /<>/debian/tmp/bin/ install -p -m 0775 concat_bvars /<>/debian/tmp/bin/ install -p -m 0775 first_roi_slicesdir /<>/debian/tmp/bin/ install -p -m 0775 first_boundary_corr /<>/debian/tmp/bin/ install -p -m 0775 surface_fdr /<>/debian/tmp/bin/ install -p -m 0775 first3Dview /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/first' make[4]: Entering directory '/<>/src/first' make[5]: Entering directory '/<>/src/first' Installing stable header files make[5]: Leaving directory '/<>/src/first' make[5]: Entering directory '/<>/src/first' Installing stable library archives make[5]: Leaving directory '/<>/src/first' make[5]: Entering directory '/<>/src/first' Installing tcl scripts make[5]: Leaving directory '/<>/src/first' make[5]: Entering directory '/<>/src/first' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/first/ make[5]: Leaving directory '/<>/src/first' make[5]: Entering directory '/<>/src/first' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/first/ make[5]: Leaving directory '/<>/src/first' make[5]: Entering directory '/<>/src/first' make[5]: Leaving directory '/<>/src/first' make[4]: Leaving directory '/<>/src/first' make[3]: Leaving directory '/<>/src/first' make[2]: Leaving directory '/<>/src/first' make[1]: Leaving directory '/<>/src/first' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/possum make[1]: Entering directory '/<>/src/possum' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o possum.o possum.cc In file included from possum.cc:85: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o possumfns.o possumfns.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o possum possum.o possumfns.o -lnewimage -lmiscmaths -lfslio -lnewmat -lutils -lprob -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o spharm_rm.o spharm_rm.cc In file included from spharm_rm.cc:72: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o spharm_rm spharm_rm.o -lnewimage -lmiscmaths -lfslio -lnewmat -lutils -lprob -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o signal2image.o signal2image.cc In file included from signal2image.cc:74: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o signal2image signal2image.o -lnewimage -lmiscmaths -lfslio -lnewmat -lutils -lprob -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o pulse.o pulse.cc In file included from pulse.cc:78: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o pulse pulse.o possumfns.o -lnewimage -lmiscmaths -lfslio -lnewmat -lutils -lprob -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o systemnoise.o systemnoise.cc In file included from systemnoise.cc:74: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o systemnoise systemnoise.o -lnewimage -lmiscmaths -lfslio -lnewmat -lutils -lprob -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o possum_sum.o possum_sum.cc In file included from possum_sum.cc:74: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o possum_sum possum_sum.o -lnewimage -lmiscmaths -lfslio -lnewmat -lutils -lprob -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o b0calc.o b0calc.cc In file included from b0calc.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o b0calc b0calc.o -lnewimage -lmiscmaths -lfslio -lnewmat -lutils -lprob -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o possum_matrix.o possum_matrix.cc In file included from possum_matrix.cc:85: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o possum_matrix possum_matrix.o possumfns.o -lnewimage -lmiscmaths -lfslio -lnewmat -lutils -lprob -lniftiio -lznz -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o tcalc.o tcalc.cc In file included from tcalc.cc:12: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ tcalc.cc: In function ‘int do_work(int, char**)’: tcalc.cc:217:18: warning: use of an operand of type ‘bool’ in ‘operator++’ is deprecated [-Wdeprecated] thereIsAnError++; ^~ tcalc.cc:223:18: warning: use of an operand of type ‘bool’ in ‘operator++’ is deprecated [-Wdeprecated] thereIsAnError++; ^~ tcalc.cc:230:18: warning: use of an operand of type ‘bool’ in ‘operator++’ is deprecated [-Wdeprecated] thereIsAnError++; ^~ tcalc.cc:370:33: warning: use of an operand of type ‘bool’ in ‘operator++’ is deprecated [-Wdeprecated] if(size_diff(i) > 0) isSmaller++; ^~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -DNDEBUG -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o tcalc tcalc.o -lnewimage -lmiscmaths -lfslio -lnewmat -lutils -lprob -lniftiio -lznz -lm -lz /bin/cp read_pulse.m write_pulse.m /<>/debian/tmp/etc/matlab make[1]: Leaving directory '/<>/src/possum' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/possum install make[1]: Entering directory '/<>/src/possum' make[2]: Entering directory '/<>/src/possum' make[3]: Entering directory '/<>/src/possum' /bin/cp read_pulse.m write_pulse.m /<>/debian/tmp/etc/matlab make[3]: Leaving directory '/<>/src/possum' make[3]: Entering directory '/<>/src/possum' make[4]: Entering directory '/<>/src/possum' Installing stable binaries install -p -m 0775 possum /<>/debian/tmp/bin/ install -p -m 0775 spharm_rm /<>/debian/tmp/bin/ install -p -m 0775 signal2image /<>/debian/tmp/bin/ install -p -m 0775 pulse /<>/debian/tmp/bin/ install -p -m 0775 systemnoise /<>/debian/tmp/bin/ install -p -m 0775 possum_sum /<>/debian/tmp/bin/ install -p -m 0775 b0calc /<>/debian/tmp/bin/ install -p -m 0775 possum_matrix /<>/debian/tmp/bin/ install -p -m 0775 tcalc /<>/debian/tmp/bin/ install -p -m 0775 possumX /<>/debian/tmp/bin/ install -p -m 0775 possumX_postproc.sh /<>/debian/tmp/bin/ install -p -m 0775 generate_b0 /<>/debian/tmp/bin/ install -p -m 0775 generate_brain /<>/debian/tmp/bin/ install -p -m 0775 generate_b0calc /<>/debian/tmp/bin/ ln -s Runtcl Possum make[4]: Leaving directory '/<>/src/possum' make[4]: Entering directory '/<>/src/possum' make[5]: Entering directory '/<>/src/possum' Installing stable header files install -p -m 0664 possumfns.h /<>/include/possum/ make[5]: Leaving directory '/<>/src/possum' make[5]: Entering directory '/<>/src/possum' Installing stable library archives make[5]: Leaving directory '/<>/src/possum' make[5]: Entering directory '/<>/src/possum' Installing tcl scripts install -p -m 0775 possum.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/possum' make[5]: Entering directory '/<>/src/possum' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/possum/ make[5]: Leaving directory '/<>/src/possum' make[5]: Entering directory '/<>/src/possum' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/possum/ make[5]: Leaving directory '/<>/src/possum' make[5]: Entering directory '/<>/src/possum' make[5]: Leaving directory '/<>/src/possum' make[4]: Leaving directory '/<>/src/possum' make[3]: Leaving directory '/<>/src/possum' make[2]: Leaving directory '/<>/src/possum' make[1]: Leaving directory '/<>/src/possum' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/sgeutils make[1]: Entering directory '/<>/src/sgeutils' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/sgeutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/sgeutils install make[1]: Entering directory '/<>/src/sgeutils' make[2]: Entering directory '/<>/src/sgeutils' make[3]: Entering directory '/<>/src/sgeutils' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/sgeutils' make[3]: Entering directory '/<>/src/sgeutils' make[4]: Entering directory '/<>/src/sgeutils' Installing stable binaries install -p -c -m 0775 fsl_sub /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/sgeutils' make[4]: Entering directory '/<>/src/sgeutils' make[5]: Entering directory '/<>/src/sgeutils' Installing stable header files make[5]: Leaving directory '/<>/src/sgeutils' make[5]: Entering directory '/<>/src/sgeutils' Installing stable library archives make[5]: Leaving directory '/<>/src/sgeutils' make[5]: Entering directory '/<>/src/sgeutils' Installing tcl scripts make[5]: Leaving directory '/<>/src/sgeutils' make[5]: Entering directory '/<>/src/sgeutils' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/sgeutils/ make[5]: Leaving directory '/<>/src/sgeutils' make[5]: Entering directory '/<>/src/sgeutils' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/sgeutils/ make[5]: Leaving directory '/<>/src/sgeutils' make[5]: Entering directory '/<>/src/sgeutils' make[5]: Leaving directory '/<>/src/sgeutils' make[4]: Leaving directory '/<>/src/sgeutils' make[3]: Leaving directory '/<>/src/sgeutils' make[2]: Leaving directory '/<>/src/sgeutils' make[1]: Leaving directory '/<>/src/sgeutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/flameo make[1]: Entering directory '/<>/src/flameo' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o design.o design.cc In file included from gsoptions.h:77, from design.cc:74: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o mcmc_mh.o mcmc_mh.cc In file included from gsoptions.h:77, from mcmc_mh.h:77, from mcmc_mh.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o gsoptions.o gsoptions.cc In file included from gsoptions.h:77, from gsoptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o gsmanager.o gsmanager.cc In file included from gsoptions.h:77, from gsmanager.h:77, from gsmanager.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -c -o flameo.o flameo.cc In file included from gsoptions.h:77, from gsmanager.h:77, from flameo.cc:80: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o flameo design.o mcmc_mh.o gsoptions.o gsmanager.o flameo.o -lutils -lnewimage -lmiscmaths -lm -lnewmat -lfslio -lniftiio -lznz -lprob -lz make[1]: Leaving directory '/<>/src/flameo' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/flameo install make[1]: Entering directory '/<>/src/flameo' make[2]: Entering directory '/<>/src/flameo' make[3]: Entering directory '/<>/src/flameo' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/flameo' make[3]: Entering directory '/<>/src/flameo' make[4]: Entering directory '/<>/src/flameo' Installing stable binaries install -p -m 0775 flameo /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/flameo' make[4]: Entering directory '/<>/src/flameo' make[5]: Entering directory '/<>/src/flameo' Installing stable header files install -p -m 0664 design.h /<>/include/flame/ install -p -m 0664 gam.h /<>/include/flame/ install -p -m 0664 gsmanager.h /<>/include/flame/ install -p -m 0664 gsoptions.h /<>/include/flame/ install -p -m 0664 mcmc.h /<>/include/flame/ install -p -m 0664 mcmc_mh.h /<>/include/flame/ make[5]: Leaving directory '/<>/src/flameo' make[5]: Entering directory '/<>/src/flameo' Installing stable library archives make[5]: Leaving directory '/<>/src/flameo' make[5]: Entering directory '/<>/src/flameo' Installing tcl scripts make[5]: Leaving directory '/<>/src/flameo' make[5]: Entering directory '/<>/src/flameo' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/flame/ make[5]: Leaving directory '/<>/src/flameo' make[5]: Entering directory '/<>/src/flameo' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/flame/ make[5]: Leaving directory '/<>/src/flameo' make[5]: Entering directory '/<>/src/flameo' make[5]: Leaving directory '/<>/src/flameo' make[4]: Leaving directory '/<>/src/flameo' make[3]: Leaving directory '/<>/src/flameo' make[2]: Leaving directory '/<>/src/flameo' make[1]: Leaving directory '/<>/src/flameo' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/oxford_asl make[1]: Entering directory '/<>/src/oxford_asl' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -c -o readoptions.o readoptions.cc In file included from readoptions.h:77, from readoptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -c -o asl_functions.o asl_functions.cc asl_functions.cc: In function ‘void OXASL::splitout(std::vector&, NEWIMAGE::volume&, std::__cxx11::string)’: asl_functions.cc:281:34: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 5 [-Wformat-overflow=] else if (n<1000) sprintf(cstr,"%d",n); ^~~~ asl_functions.cc:281:34: note: directive argument in the range [0, 2147483647] In file included from /usr/include/stdio.h:867, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from asl_functions.h:72, from asl_functions.cc:69: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 11 bytes into a destination of size 5 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ asl_functions.cc:280:33: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 4 [-Wformat-overflow=] else if (n<100) sprintf(cstr,"0%d",n); ^~~~~ asl_functions.cc:280:33: note: directive argument in the range [0, 2147483647] In file included from /usr/include/stdio.h:867, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from asl_functions.h:72, from asl_functions.cc:69: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 3 and 12 bytes into a destination of size 5 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ asl_functions.cc:279:27: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 3 [-Wformat-overflow=] if (n<10) sprintf(cstr,"00%d",n); ^~~~~~ asl_functions.cc:279:27: note: directive argument in the range [0, 2147483647] In file included from /usr/include/stdio.h:867, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from asl_functions.h:72, from asl_functions.cc:69: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 4 and 13 bytes into a destination of size 5 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ asl_functions.cc: In function ‘void OXASL::epochout(std::vector&, NEWIMAGE::volume&, std::__cxx11::string, int, int, bool, bool)’: asl_functions.cc:400:34: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 5 [-Wformat-overflow=] else if (e<1000) sprintf(cstr,"%d",e); ^~~~ asl_functions.cc:400:34: note: directive argument in the range [0, 2147483647] In file included from /usr/include/stdio.h:867, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from asl_functions.h:72, from asl_functions.cc:69: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 11 bytes into a destination of size 5 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ asl_functions.cc:399:33: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 4 [-Wformat-overflow=] else if (e<100) sprintf(cstr,"0%d",e); ^~~~~ asl_functions.cc:399:33: note: directive argument in the range [0, 2147483647] In file included from /usr/include/stdio.h:867, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from asl_functions.h:72, from asl_functions.cc:69: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 3 and 12 bytes into a destination of size 5 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ asl_functions.cc:398:27: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 3 [-Wformat-overflow=] if (e<10) sprintf(cstr,"00%d",e); ^~~~~~ asl_functions.cc:398:27: note: directive argument in the range [0, 2147483647] In file included from /usr/include/stdio.h:867, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from asl_functions.h:72, from asl_functions.cc:69: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 4 and 13 bytes into a destination of size 5 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -c -o asl_file.o asl_file.cc In file included from readoptions.h:77, from asl_file.cc:79: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o asl_file readoptions.o asl_functions.o asl_file.o -lutils -lnewimage -lmiscmaths -lm -lnewmat -lfslio -lniftiio -lznz -lz make[1]: Leaving directory '/<>/src/oxford_asl' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/oxford_asl install make[1]: Entering directory '/<>/src/oxford_asl' make[2]: Entering directory '/<>/src/oxford_asl' make[3]: Entering directory '/<>/src/oxford_asl' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/oxford_asl' make[3]: Entering directory '/<>/src/oxford_asl' make[4]: Entering directory '/<>/src/oxford_asl' Installing stable binaries install -p -m 0775 asl_file /<>/debian/tmp/bin/ install -p -m 0775 oxford_asl /<>/debian/tmp/bin/ install -p -m 0775 asl_calib /<>/debian/tmp/bin/ install -p -m 0775 asl_reg /<>/debian/tmp/bin/ install -p -m 0775 quasil /<>/debian/tmp/bin/ ln -s Runtcl Asl make[4]: Leaving directory '/<>/src/oxford_asl' make[4]: Entering directory '/<>/src/oxford_asl' make[5]: Entering directory '/<>/src/oxford_asl' Installing stable header files install -p -m 0664 asl_functions.h /<>/include/oxford_asl/ install -p -m 0664 readoptions.h /<>/include/oxford_asl/ make[5]: Leaving directory '/<>/src/oxford_asl' make[5]: Entering directory '/<>/src/oxford_asl' Installing stable library archives make[5]: Leaving directory '/<>/src/oxford_asl' make[5]: Entering directory '/<>/src/oxford_asl' Installing tcl scripts install -p -m 0775 asl.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/oxford_asl' make[5]: Entering directory '/<>/src/oxford_asl' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/oxford_asl/ make[5]: Leaving directory '/<>/src/oxford_asl' make[5]: Entering directory '/<>/src/oxford_asl' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/oxford_asl/ make[5]: Leaving directory '/<>/src/oxford_asl' make[5]: Entering directory '/<>/src/oxford_asl' make[5]: Leaving directory '/<>/src/oxford_asl' make[4]: Leaving directory '/<>/src/oxford_asl' make[3]: Leaving directory '/<>/src/oxford_asl' make[2]: Leaving directory '/<>/src/oxford_asl' make[1]: Leaving directory '/<>/src/oxford_asl' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/qboot make[1]: Entering directory '/<>/src/qboot' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o qboot.o qboot.cc In file included from qbootOptions.h:77, from qboot.h:78, from qboot.cc:75: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ In file included from qboot.cc:75: qboot.h:111:41: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) const int& m_SH_order; //maximum SH order (must be even) ^~~~~~~~~~ In file included from qboot.cc:75: qboot.h:268:40: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) const int& m_SH_order; //maximum SH order (must be even) ^~~~~~~~~~ qboot.h:269:40: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) const int& Num_of_coeff; //Number of coefficients that will be estimated. ^~~~~~~~~~~~ qboot.h:492:40: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) const int& lmax; //maximum SH order employed ^~~~ qboot.h:494:40: warning: ‘unused’ attribute ignored [-Wattributes] __attribute__((unused)) const int& nsamples; //number of bootstrap samples ^~~~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o qbootOptions.o qbootOptions.cc In file included from qbootOptions.h:77, from qbootOptions.cc:73: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o qboot qboot.o qbootOptions.o -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lniftiio -lznz -lcprob -lprob -lm -lz make[1]: Leaving directory '/<>/src/qboot' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/qboot install make[1]: Entering directory '/<>/src/qboot' make[2]: Entering directory '/<>/src/qboot' make[3]: Entering directory '/<>/src/qboot' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/qboot' make[3]: Entering directory '/<>/src/qboot' make[4]: Entering directory '/<>/src/qboot' Installing stable binaries install -p -m 0775 qboot /<>/debian/tmp/bin/ install -p -m 0775 qboot_parallel /<>/debian/tmp/bin/ install -p -m 0775 qboot_postproc.sh /<>/debian/tmp/bin/ install -p -m 0775 qboot_preproc.sh /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/qboot' make[4]: Entering directory '/<>/src/qboot' make[5]: Entering directory '/<>/src/qboot' Installing stable header files install -p -m 0664 peakfinder.h /<>/include/qboot/ install -p -m 0664 qboot.h /<>/include/qboot/ install -p -m 0664 qbootOptions.h /<>/include/qboot/ install -p -m 0664 sphere_tessellation.h /<>/include/qboot/ make[5]: Leaving directory '/<>/src/qboot' make[5]: Entering directory '/<>/src/qboot' Installing stable library archives make[5]: Leaving directory '/<>/src/qboot' make[5]: Entering directory '/<>/src/qboot' Installing tcl scripts make[5]: Leaving directory '/<>/src/qboot' make[5]: Entering directory '/<>/src/qboot' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/qboot/ make[5]: Leaving directory '/<>/src/qboot' make[5]: Entering directory '/<>/src/qboot' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/qboot/ make[5]: Leaving directory '/<>/src/qboot' make[5]: Entering directory '/<>/src/qboot' make[5]: Leaving directory '/<>/src/qboot' make[4]: Leaving directory '/<>/src/qboot' make[3]: Leaving directory '/<>/src/qboot' make[2]: Leaving directory '/<>/src/qboot' make[1]: Leaving directory '/<>/src/qboot' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/topup make[1]: Entering directory '/<>/src/topup' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o topup_file_io.o topup_file_io.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o topup_costfunctions.o topup_costfunctions.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o topupfns.o topupfns.cpp In file included from topupfns.cpp:81: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o topup.o topup.cpp In file included from topupfns.h:81, from topup.cpp:94: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o topup topup_file_io.o topup_costfunctions.o topupfns.o topup.o -lwarpfns -lmeshclass -lbasisfield -lnewimage -lmiscmaths -lprob -lfslio -lniftiio -lznz -lutils -lnewmat -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o displacement_vector.o displacement_vector.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o applytopup.o applytopup.cpp In file included from applytopup.cpp:73: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o applytopup topup_file_io.o displacement_vector.o applytopup.o -lwarpfns -lmeshclass -lbasisfield -lnewimage -lmiscmaths -lprob -lfslio -lniftiio -lznz -lutils -lnewmat -lm -lz /bin/cp -rf flirtsch/* /<>/debian/tmp/etc/flirtsch/. make[1]: Leaving directory '/<>/src/topup' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/topup install make[1]: Entering directory '/<>/src/topup' make[2]: Entering directory '/<>/src/topup' make[3]: Entering directory '/<>/src/topup' /bin/cp -rf flirtsch/* /<>/debian/tmp/etc/flirtsch/. make[3]: Leaving directory '/<>/src/topup' make[3]: Entering directory '/<>/src/topup' make[4]: Entering directory '/<>/src/topup' Installing stable binaries install -p -m 0775 topup /<>/debian/tmp/bin/ install -p -m 0775 applytopup /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/topup' make[4]: Entering directory '/<>/src/topup' make[5]: Entering directory '/<>/src/topup' Installing stable header files install -p -m 0664 applytopup.h /<>/include/topup/ install -p -m 0664 displacement_vector.h /<>/include/topup/ install -p -m 0664 topup_costfunctions.h /<>/include/topup/ install -p -m 0664 topup_file_io.h /<>/include/topup/ install -p -m 0664 topupfns.h /<>/include/topup/ make[5]: Leaving directory '/<>/src/topup' make[5]: Entering directory '/<>/src/topup' Installing stable library archives make[5]: Leaving directory '/<>/src/topup' make[5]: Entering directory '/<>/src/topup' Installing tcl scripts make[5]: Leaving directory '/<>/src/topup' make[5]: Entering directory '/<>/src/topup' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/topup/ make[5]: Leaving directory '/<>/src/topup' make[5]: Entering directory '/<>/src/topup' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/topup/ make[5]: Leaving directory '/<>/src/topup' make[5]: Entering directory '/<>/src/topup' make[5]: Leaving directory '/<>/src/topup' make[4]: Leaving directory '/<>/src/topup' make[3]: Leaving directory '/<>/src/topup' make[2]: Leaving directory '/<>/src/topup' make[1]: Leaving directory '/<>/src/topup' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/ptx2 make[1]: Entering directory '/<>/src/ptx2' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o probtrackx.o probtrackx.cc In file included from probtrackxOptions.h:77, from probtrackx.h:65, from probtrackx.cc:69: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o probtrackxOptions.o probtrackxOptions.cc In file included from probtrackxOptions.h:77, from probtrackxOptions.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o streamlines.o streamlines.cc In file included from probtrackxOptions.h:77, from streamlines.h:71, from streamlines.cc:65: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ streamlines.cc: In member function ‘int TRACT::Streamliner::streamline(const float&, const float&, const float&, const NEWMAT::ColumnVector&, const int&)’: streamlines.cc:813:36: warning: narrowing conversion of ‘(&((TRACT::Streamliner*)this)->TRACT::Streamliner::m_path.std::vector::operator[](((std::vector::size_type)(cnt - 1))))->NEWMAT::ColumnVector::operator()(1)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] float line[2][3]={{m_path[cnt-1](1),m_path[cnt-1](2),m_path[cnt-1](3)}, ~~~~~~~~~~~~~^~~ streamlines.cc:813:53: warning: narrowing conversion of ‘(&((TRACT::Streamliner*)this)->TRACT::Streamliner::m_path.std::vector::operator[](((std::vector::size_type)(cnt - 1))))->NEWMAT::ColumnVector::operator()(2)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] float line[2][3]={{m_path[cnt-1](1),m_path[cnt-1](2),m_path[cnt-1](3)}, ~~~~~~~~~~~~~^~~ streamlines.cc:813:70: warning: narrowing conversion of ‘(&((TRACT::Streamliner*)this)->TRACT::Streamliner::m_path.std::vector::operator[](((std::vector::size_type)(cnt - 1))))->NEWMAT::ColumnVector::operator()(3)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] float line[2][3]={{m_path[cnt-1](1),m_path[cnt-1](2),m_path[cnt-1](3)}, ~~~~~~~~~~~~~^~~ streamlines.cc:814:20: warning: narrowing conversion of ‘(&((TRACT::Streamliner*)this)->TRACT::Streamliner::m_path.std::vector::operator[](((std::vector::size_type)cnt)))->NEWMAT::ColumnVector::operator()(1)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] {m_path[cnt](1),m_path[cnt](2),m_path[cnt](3)}}; ~~~~~~~~~~~^~~ streamlines.cc:814:35: warning: narrowing conversion of ‘(&((TRACT::Streamliner*)this)->TRACT::Streamliner::m_path.std::vector::operator[](((std::vector::size_type)cnt)))->NEWMAT::ColumnVector::operator()(2)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] {m_path[cnt](1),m_path[cnt](2),m_path[cnt](3)}}; ~~~~~~~~~~~^~~ streamlines.cc:814:50: warning: narrowing conversion of ‘(&((TRACT::Streamliner*)this)->TRACT::Streamliner::m_path.std::vector::operator[](((std::vector::size_type)cnt)))->NEWMAT::ColumnVector::operator()(3)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] {m_path[cnt](1),m_path[cnt](2),m_path[cnt](3)}}; ~~~~~~~~~~~^~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o ptx_simple.o ptx_simple.cc In file included from probtrackxOptions.h:77, from ptx_simple.h:69, from ptx_simple.cc:65: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o ptx_seedmask.o ptx_seedmask.cc In file included from probtrackxOptions.h:77, from ptx_seedmask.h:69, from ptx_seedmask.cc:65: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o ptx_nmasks.o ptx_nmasks.cc In file included from probtrackxOptions.h:77, from ptx_nmasks.h:69, from ptx_nmasks.cc:65: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o csv.o csv.cc csv.cc: In member function ‘int CSV::coord_sign(const int&, const NEWMAT::ColumnVector&) const’: csv.cc:381:24: warning: narrowing conversion of ‘x1.NEWMAT::ColumnVector::operator()(1)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] float line[2][3]={{x1(1),x1(2),x1(3)},{x2(1),x2(2),x2(3)}}; ~~^~~ csv.cc:381:30: warning: narrowing conversion of ‘x1.NEWMAT::ColumnVector::operator()(2)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] float line[2][3]={{x1(1),x1(2),x1(3)},{x2(1),x2(2),x2(3)}}; ~~^~~ csv.cc:381:36: warning: narrowing conversion of ‘x1.NEWMAT::ColumnVector::operator()(3)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] float line[2][3]={{x1(1),x1(2),x1(3)},{x2(1),x2(2),x2(3)}}; ~~^~~ csv.cc:381:44: warning: narrowing conversion of ‘(& x2)->NEWMAT::ColumnVector::operator()(1)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] float line[2][3]={{x1(1),x1(2),x1(3)},{x2(1),x2(2),x2(3)}}; ~~^~~ csv.cc:381:50: warning: narrowing conversion of ‘(& x2)->NEWMAT::ColumnVector::operator()(2)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] float line[2][3]={{x1(1),x1(2),x1(3)},{x2(1),x2(2),x2(3)}}; ~~^~~ csv.cc:381:56: warning: narrowing conversion of ‘(& x2)->NEWMAT::ColumnVector::operator()(3)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] float line[2][3]={{x1(1),x1(2),x1(3)},{x2(1),x2(2),x2(3)}}; ~~^~~ csv.cc: In member function ‘void CSV::init_surfvol()’: csv.cc:463:28: warning: narrowing conversion of ‘xx1.NEWMAT::ColumnVector::operator()(1)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] float tri[3][3]={{xx1(1),xx1(2),xx1(3)}, ~~~^~~ csv.cc:463:35: warning: narrowing conversion of ‘xx1.NEWMAT::ColumnVector::operator()(2)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] float tri[3][3]={{xx1(1),xx1(2),xx1(3)}, ~~~^~~ csv.cc:463:42: warning: narrowing conversion of ‘xx1.NEWMAT::ColumnVector::operator()(3)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] float tri[3][3]={{xx1(1),xx1(2),xx1(3)}, ~~~^~~ csv.cc:464:14: warning: narrowing conversion of ‘xx2.NEWMAT::ColumnVector::operator()(1)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] {xx2(1),xx2(2),xx2(3)}, ~~~^~~ csv.cc:464:21: warning: narrowing conversion of ‘xx2.NEWMAT::ColumnVector::operator()(2)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] {xx2(1),xx2(2),xx2(3)}, ~~~^~~ csv.cc:464:28: warning: narrowing conversion of ‘xx2.NEWMAT::ColumnVector::operator()(3)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] {xx2(1),xx2(2),xx2(3)}, ~~~^~~ csv.cc:465:14: warning: narrowing conversion of ‘xx3.NEWMAT::ColumnVector::operator()(1)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] {xx3(1),xx3(2),xx3(3)}}; ~~~^~~ csv.cc:465:21: warning: narrowing conversion of ‘xx3.NEWMAT::ColumnVector::operator()(2)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] {xx3(1),xx3(2),xx3(3)}}; ~~~^~~ csv.cc:465:28: warning: narrowing conversion of ‘xx3.NEWMAT::ColumnVector::operator()(3)’ from ‘RBD_COMMON::Real’ {aka ‘double’} to ‘float’ inside { } [-Wnarrowing] {xx3(1),xx3(2),xx3(3)}}; ~~~^~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o csv_mesh.o csv_mesh.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o probtrackx2 probtrackx.o probtrackxOptions.o streamlines.o ptx_simple.o ptx_seedmask.o ptx_nmasks.o csv.o csv_mesh.o -lwarpfns -lbasisfield -lfslsurface -lfslvtkio -lmeshclass -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lgiftiio -lexpat -lfirst_lib -lniftiio -lznz -lcprob -lutils -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o surf2surf.o surf2surf.cc In file included from surf2surf.cc:64: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o surf2surf surf2surf.o csv.o csv_mesh.o -lwarpfns -lbasisfield -lfslsurface -lfslvtkio -lmeshclass -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lgiftiio -lexpat -lfirst_lib -lniftiio -lznz -lcprob -lutils -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o surf2volume.o surf2volume.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o surf2volume surf2volume.o csv.o csv_mesh.o -lwarpfns -lbasisfield -lfslsurface -lfslvtkio -lmeshclass -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lgiftiio -lexpat -lfirst_lib -lniftiio -lznz -lcprob -lutils -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o surf_proj.o surf_proj.cc In file included from surf_proj.cc:68: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o surf_proj surf_proj.o csv.o csv_mesh.o -lwarpfns -lbasisfield -lfslsurface -lfslvtkio -lmeshclass -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lgiftiio -lexpat -lfirst_lib -lniftiio -lznz -lcprob -lutils -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o label2surf.o label2surf.cc In file included from label2surf.cc:72: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ label2surf.cc: In function ‘void read_label(std::vector&, const string&)’: label2surf.cc:127:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] fscanf(fp, "%[^\n]", str); ~~~~~~^~~~~~~~~~~~~~~~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o label2surf label2surf.o csv_mesh.o -lwarpfns -lbasisfield -lfslsurface -lfslvtkio -lmeshclass -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lgiftiio -lexpat -lfirst_lib -lniftiio -lznz -lcprob -lutils -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o find_the_biggest.o find_the_biggest.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o find_the_biggest find_the_biggest.o csv_mesh.o -lwarpfns -lbasisfield -lfslsurface -lfslvtkio -lmeshclass -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lgiftiio -lexpat -lfirst_lib -lniftiio -lznz -lcprob -lutils -lprob -lm -lz g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -c -o proj_thresh.o proj_thresh.cc g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I -I/<>/extras/include/libcprob -I/<>/extras/include/libprob -I/usr/include/boost -I/usr/include -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L -L/<>/extras/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o proj_thresh proj_thresh.o csv_mesh.o -lwarpfns -lbasisfield -lfslsurface -lfslvtkio -lmeshclass -lnewimage -lutils -lmiscmaths -lnewmat -lfslio -lgiftiio -lexpat -lfirst_lib -lniftiio -lznz -lcprob -lutils -lprob -lm -lz make[1]: Leaving directory '/<>/src/ptx2' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/ptx2 install make[1]: Entering directory '/<>/src/ptx2' make[2]: Entering directory '/<>/src/ptx2' make[3]: Entering directory '/<>/src/ptx2' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/ptx2' make[3]: Entering directory '/<>/src/ptx2' make[4]: Entering directory '/<>/src/ptx2' Installing stable binaries install -p -m 0775 probtrackx2 /<>/debian/tmp/bin/ install -p -m 0775 surf2surf /<>/debian/tmp/bin/ install -p -m 0775 surf2volume /<>/debian/tmp/bin/ install -p -m 0775 surf_proj /<>/debian/tmp/bin/ install -p -m 0775 label2surf /<>/debian/tmp/bin/ install -p -m 0775 find_the_biggest /<>/debian/tmp/bin/ install -p -m 0775 proj_thresh /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/ptx2' make[4]: Entering directory '/<>/src/ptx2' make[5]: Entering directory '/<>/src/ptx2' Installing stable header files install -p -m 0664 ccops.h /<>/include/fdt/ install -p -m 0664 ccopsOptions.h /<>/include/fdt/ install -p -m 0664 commonopts.h /<>/include/fdt/ install -p -m 0664 csv.h /<>/include/fdt/ install -p -m 0664 csv_mesh.h /<>/include/fdt/ install -p -m 0664 particle.h /<>/include/fdt/ install -p -m 0664 probtrackx.h /<>/include/fdt/ install -p -m 0664 probtrackxOptions.h /<>/include/fdt/ install -p -m 0664 ptx_meshmask.h /<>/include/fdt/ install -p -m 0664 ptx_nmasks.h /<>/include/fdt/ install -p -m 0664 ptx_seedmask.h /<>/include/fdt/ install -p -m 0664 ptx_simple.h /<>/include/fdt/ install -p -m 0664 streamlines.h /<>/include/fdt/ install -p -m 0664 tractvolsx.h /<>/include/fdt/ make[5]: Leaving directory '/<>/src/ptx2' make[5]: Entering directory '/<>/src/ptx2' Installing stable library archives make[5]: Leaving directory '/<>/src/ptx2' make[5]: Entering directory '/<>/src/ptx2' Installing tcl scripts make[5]: Leaving directory '/<>/src/ptx2' make[5]: Entering directory '/<>/src/ptx2' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fdt/ make[5]: Leaving directory '/<>/src/ptx2' make[5]: Entering directory '/<>/src/ptx2' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fdt/ make[5]: Leaving directory '/<>/src/ptx2' make[5]: Entering directory '/<>/src/ptx2' make[5]: Leaving directory '/<>/src/ptx2' make[4]: Leaving directory '/<>/src/ptx2' make[3]: Leaving directory '/<>/src/ptx2' make[2]: Leaving directory '/<>/src/ptx2' make[1]: Leaving directory '/<>/src/ptx2' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/lesions make[1]: Entering directory '/<>/src/lesions' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o lesion_filling.o lesion_filling.cc In file included from lesion_filling.cc:76: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/usr/include -I/usr/include/boost -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o lesion_filling lesion_filling.o -lwarpfns -lbasisfield -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lm -lz make[1]: Leaving directory '/<>/src/lesions' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/lesions install make[1]: Entering directory '/<>/src/lesions' make[2]: Entering directory '/<>/src/lesions' make[3]: Entering directory '/<>/src/lesions' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/lesions' make[3]: Entering directory '/<>/src/lesions' make[4]: Entering directory '/<>/src/lesions' Installing stable binaries install -p -m 0775 lesion_filling /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/lesions' make[4]: Entering directory '/<>/src/lesions' make[5]: Entering directory '/<>/src/lesions' Installing stable header files make[5]: Leaving directory '/<>/src/lesions' make[5]: Entering directory '/<>/src/lesions' Installing stable library archives make[5]: Leaving directory '/<>/src/lesions' make[5]: Entering directory '/<>/src/lesions' Installing tcl scripts make[5]: Leaving directory '/<>/src/lesions' make[5]: Entering directory '/<>/src/lesions' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/lesions/ make[5]: Leaving directory '/<>/src/lesions' make[5]: Entering directory '/<>/src/lesions' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/lesions/ make[5]: Leaving directory '/<>/src/lesions' make[5]: Entering directory '/<>/src/lesions' make[5]: Leaving directory '/<>/src/lesions' make[4]: Leaving directory '/<>/src/lesions' make[3]: Leaving directory '/<>/src/lesions' make[2]: Leaving directory '/<>/src/lesions' make[1]: Leaving directory '/<>/src/lesions' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/eddy make[1]: Entering directory '/<>/src/eddy' g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -fopenmp -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o eddy.o eddy.cpp In file included from EddyCommandLineOptions.h:5, from eddy.cpp:22: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -fopenmp -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o EddyCommandLineOptions.o EddyCommandLineOptions.cpp In file included from EddyCommandLineOptions.cpp:75: /<>/src/utils/options.h:580:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(X_OptionError); ^~~~~ g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -fopenmp -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o ECModels.o ECModels.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -fopenmp -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o ECScanClasses.o ECScanClasses.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -fopenmp -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o EddyUtils.o EddyUtils.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -fopenmp -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o EddyHelperClasses.o EddyHelperClasses.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -fopenmp -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o DiffusionGP.o DiffusionGP.cpp g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -fopenmp -I/usr/include/newmat -I/usr/include/boost -I. -I/<>/include -I/<>/include -c -o b0Predictor.o b0Predictor.cpp g++ -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -rdynamic -fopenmp -L. -L/<>/lib -L/<>/lib -o eddy eddy.o EddyCommandLineOptions.o ECModels.o ECScanClasses.o EddyUtils.o EddyHelperClasses.o DiffusionGP.o b0Predictor.o ../topup/topup_file_io.o ../topup/displacement_vector.o -lwarpfns -lmeshclass -lbasisfield -lnewimage -lmiscmaths -lprob -lfslio -lniftiio -lznz -lutils -lnewmat -lm -lz make[1]: Leaving directory '/<>/src/eddy' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/eddy install make[1]: Entering directory '/<>/src/eddy' make[2]: Entering directory '/<>/src/eddy' make[3]: Entering directory '/<>/src/eddy' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/eddy' make[3]: Entering directory '/<>/src/eddy' make[4]: Entering directory '/<>/src/eddy' Installing stable binaries install -p -m 0775 eddy /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/eddy' make[4]: Entering directory '/<>/src/eddy' make[5]: Entering directory '/<>/src/eddy' Installing stable header files install -p -m 0664 DWIPredictionMaker.h /<>/include/eddy/ install -p -m 0664 DiffusionGP.h /<>/include/eddy/ install -p -m 0664 ECModels.h /<>/include/eddy/ install -p -m 0664 ECScanClasses.h /<>/include/eddy/ install -p -m 0664 EddyCommandLineOptions.h /<>/include/eddy/ install -p -m 0664 EddyHelperClasses.h /<>/include/eddy/ install -p -m 0664 EddyUtils.h /<>/include/eddy/ install -p -m 0664 b0Predictor.h /<>/include/eddy/ make[5]: Leaving directory '/<>/src/eddy' make[5]: Entering directory '/<>/src/eddy' Installing stable library archives make[5]: Leaving directory '/<>/src/eddy' make[5]: Entering directory '/<>/src/eddy' Installing tcl scripts make[5]: Leaving directory '/<>/src/eddy' make[5]: Entering directory '/<>/src/eddy' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/eddy/ make[5]: Leaving directory '/<>/src/eddy' make[5]: Entering directory '/<>/src/eddy' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/eddy/ make[5]: Leaving directory '/<>/src/eddy' make[5]: Entering directory '/<>/src/eddy' make[5]: Leaving directory '/<>/src/eddy' make[4]: Leaving directory '/<>/src/eddy' make[3]: Leaving directory '/<>/src/eddy' make[2]: Leaving directory '/<>/src/eddy' make[1]: Leaving directory '/<>/src/eddy' dh_testdir # fix permissions find debian/tmp/tcl/BWidget -type f -exec chmod -x {} \; chmod 644 debian/tmp/tcl/*.{tcl,xbm,ppm,ico} chmod -x debian/tmp/etc/flirtsch/* # cleanup TCL stuff rm -r debian/tmp/tcl/BWidget/BWMan/ find debian/tmp/tcl/BWidget/ -name '*.txt' -delete # generate debhelper file to create /usr/bin symlinks and manpage links # for all relevant binaries installed by the versioned FSL package for f in $(find debian/tmp/bin \! -type d \! -name Runtcl | sort); do \ bname=$(basename $f); \ [[ "$bname" = *gpu* ]] && ptype="gpu" || ptype="core" ; \ echo "/usr/lib/fsl/5.0/fsl_app_wrapper /usr/bin/fsl5.0-$bname" >> debian/fsl-5.0-$ptype.links ; \ echo "/usr/share/man/man1/fsl-5.0.1.gz /usr/share/man/man1/fsl5.0-${bname}.1.gz" >> debian/fsl-5.0-$ptype.links ; \ done touch build-stamp fakeroot debian/rules binary-arch if [ ! -d /<>/debian/tmp ]; then mkdir -p /<>/debian/tmp; fi dh_installdirs LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/libprob make[1]: Entering directory '/<>/extras/src/libprob' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/extras/src/libprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/libprob install make[1]: Entering directory '/<>/extras/src/libprob' make[2]: Entering directory '/<>/extras/src/libprob' make[3]: Entering directory '/<>/extras/src/libprob' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/extras/src/libprob' make[3]: Entering directory '/<>/extras/src/libprob' make[4]: Entering directory '/<>/extras/src/libprob' Installing stable binaries make[4]: Leaving directory '/<>/extras/src/libprob' make[4]: Entering directory '/<>/extras/src/libprob' make[5]: Entering directory '/<>/extras/src/libprob' Installing stable header files install -p -m 0664 libprob.h /<>/include/libprob/ make[5]: Leaving directory '/<>/extras/src/libprob' make[5]: Entering directory '/<>/extras/src/libprob' Installing stable library archives make[5]: Leaving directory '/<>/extras/src/libprob' make[5]: Entering directory '/<>/extras/src/libprob' Installing tcl scripts make[5]: Leaving directory '/<>/extras/src/libprob' make[5]: Entering directory '/<>/extras/src/libprob' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/libprob/ make[5]: Leaving directory '/<>/extras/src/libprob' make[5]: Entering directory '/<>/extras/src/libprob' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/libprob/ make[5]: Leaving directory '/<>/extras/src/libprob' make[5]: Entering directory '/<>/extras/src/libprob' make[5]: Leaving directory '/<>/extras/src/libprob' make[4]: Leaving directory '/<>/extras/src/libprob' make[3]: Leaving directory '/<>/extras/src/libprob' make[2]: Leaving directory '/<>/extras/src/libprob' make[1]: Leaving directory '/<>/extras/src/libprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/libcprob make[1]: Entering directory '/<>/extras/src/libcprob' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/extras/src/libcprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/libcprob install make[1]: Entering directory '/<>/extras/src/libcprob' make[2]: Entering directory '/<>/extras/src/libcprob' make[3]: Entering directory '/<>/extras/src/libcprob' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/extras/src/libcprob' make[3]: Entering directory '/<>/extras/src/libcprob' make[4]: Entering directory '/<>/extras/src/libcprob' Installing stable binaries make[4]: Leaving directory '/<>/extras/src/libcprob' make[4]: Entering directory '/<>/extras/src/libcprob' make[5]: Entering directory '/<>/extras/src/libcprob' Installing stable header files install -p -m 0664 libcprob.h /<>/include/libcprob/ make[5]: Leaving directory '/<>/extras/src/libcprob' make[5]: Entering directory '/<>/extras/src/libcprob' Installing stable library archives make[5]: Leaving directory '/<>/extras/src/libcprob' make[5]: Entering directory '/<>/extras/src/libcprob' Installing tcl scripts make[5]: Leaving directory '/<>/extras/src/libcprob' make[5]: Entering directory '/<>/extras/src/libcprob' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/libcprob/ make[5]: Leaving directory '/<>/extras/src/libcprob' make[5]: Entering directory '/<>/extras/src/libcprob' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/libcprob/ make[5]: Leaving directory '/<>/extras/src/libcprob' make[5]: Entering directory '/<>/extras/src/libcprob' make[5]: Leaving directory '/<>/extras/src/libcprob' make[4]: Leaving directory '/<>/extras/src/libcprob' make[3]: Leaving directory '/<>/extras/src/libcprob' make[2]: Leaving directory '/<>/extras/src/libcprob' make[1]: Leaving directory '/<>/extras/src/libcprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/cprob make[1]: Entering directory '/<>/extras/src/cprob' g++ -shared -o libprob.so bdtr.o btdtr.o chdtr.o drand.o expx2.o fdtr.o gamma.o gdtr.o igam.o igami.o incbet.o incbi.o mtherr.o nbdtr.o ndtr.o ndtri.o pdtr.o stdtr.o unity.o polevl.o const.o xmath.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L. -L/<>/lib -L/<>/lib rm -f libcprob.so ln -s libprob.so libcprob.so make[1]: Leaving directory '/<>/extras/src/cprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C extras/src/cprob install make[1]: Entering directory '/<>/extras/src/cprob' make[2]: Entering directory '/<>/extras/src/cprob' make[3]: Entering directory '/<>/extras/src/cprob' g++ -shared -o libprob.so bdtr.o btdtr.o chdtr.o drand.o expx2.o fdtr.o gamma.o gdtr.o igam.o igami.o incbet.o incbi.o mtherr.o nbdtr.o ndtr.o ndtri.o pdtr.o stdtr.o unity.o polevl.o const.o xmath.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L. -L/<>/lib -L/<>/lib rm -f libcprob.so ln -s libprob.so libcprob.so make[3]: Leaving directory '/<>/extras/src/cprob' make[3]: Entering directory '/<>/extras/src/cprob' make[4]: Entering directory '/<>/extras/src/cprob' Installing stable binaries make[4]: Leaving directory '/<>/extras/src/cprob' make[4]: Entering directory '/<>/extras/src/cprob' make[5]: Entering directory '/<>/extras/src/cprob' Installing stable header files install -p -m 0664 cprob.h /<>/include/cprob/ install -p -m 0664 mconf.h /<>/include/cprob/ install -p -m 0664 xmath.h /<>/include/cprob/ make[5]: Leaving directory '/<>/extras/src/cprob' make[5]: Entering directory '/<>/extras/src/cprob' Installing stable library archives install -p -m 0664 libcprob.so /<>/lib install -p -m 0664 libprob.so /<>/lib make[5]: Leaving directory '/<>/extras/src/cprob' make[5]: Entering directory '/<>/extras/src/cprob' Installing tcl scripts make[5]: Leaving directory '/<>/extras/src/cprob' make[5]: Entering directory '/<>/extras/src/cprob' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/cprob/ make[5]: Leaving directory '/<>/extras/src/cprob' make[5]: Entering directory '/<>/extras/src/cprob' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/cprob/ make[5]: Leaving directory '/<>/extras/src/cprob' make[5]: Entering directory '/<>/extras/src/cprob' make[5]: Leaving directory '/<>/extras/src/cprob' make[4]: Leaving directory '/<>/extras/src/cprob' make[3]: Leaving directory '/<>/extras/src/cprob' make[2]: Leaving directory '/<>/extras/src/cprob' make[1]: Leaving directory '/<>/extras/src/cprob' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/utils make[1]: Entering directory '/<>/src/utils' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/utils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/utils install make[1]: Entering directory '/<>/src/utils' make[2]: Entering directory '/<>/src/utils' make[3]: Entering directory '/<>/src/utils' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/utils' make[3]: Entering directory '/<>/src/utils' make[4]: Entering directory '/<>/src/utils' Installing stable binaries make[4]: Leaving directory '/<>/src/utils' make[4]: Entering directory '/<>/src/utils' make[5]: Entering directory '/<>/src/utils' Installing stable header files install -p -m 0664 buildno.h /<>/include/utils/ install -p -m 0664 fsl_isfinite.h /<>/include/utils/ install -p -m 0664 log.h /<>/include/utils/ install -p -m 0664 options.h /<>/include/utils/ install -p -m 0664 stack_dump.h /<>/include/utils/ install -p -m 0664 time_tracer.h /<>/include/utils/ install -p -m 0664 tracer_plus.h /<>/include/utils/ make[5]: Leaving directory '/<>/src/utils' make[5]: Entering directory '/<>/src/utils' Installing stable library archives install -p -m 0664 libutils.so /<>/lib make[5]: Leaving directory '/<>/src/utils' make[5]: Entering directory '/<>/src/utils' Installing tcl scripts make[5]: Leaving directory '/<>/src/utils' make[5]: Entering directory '/<>/src/utils' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/utils/ make[5]: Leaving directory '/<>/src/utils' make[5]: Entering directory '/<>/src/utils' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/utils/ make[5]: Leaving directory '/<>/src/utils' make[5]: Entering directory '/<>/src/utils' make[5]: Leaving directory '/<>/src/utils' make[4]: Leaving directory '/<>/src/utils' make[3]: Leaving directory '/<>/src/utils' make[2]: Leaving directory '/<>/src/utils' make[1]: Leaving directory '/<>/src/utils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslio make[1]: Entering directory '/<>/src/fslio' g++ -shared -o libfslio.so fslio.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L. -L/<>/lib -L/<>/lib -lniftiio -lznz -lz make[1]: Leaving directory '/<>/src/fslio' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslio install make[1]: Entering directory '/<>/src/fslio' make[2]: Entering directory '/<>/src/fslio' make[3]: Entering directory '/<>/src/fslio' g++ -shared -o libfslio.so fslio.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L. -L/<>/lib -L/<>/lib -lniftiio -lznz -lz make[3]: Leaving directory '/<>/src/fslio' make[3]: Entering directory '/<>/src/fslio' make[4]: Entering directory '/<>/src/fslio' Installing stable binaries install -p -m 0775 remove_ext /<>/debian/tmp/bin/ install -p -m 0775 imtest /<>/debian/tmp/bin/ install -p -m 0775 imglob /<>/debian/tmp/bin/ install -p -m 0775 imcp /<>/debian/tmp/bin/ install -p -m 0775 imln /<>/debian/tmp/bin/ install -p -m 0775 imrm /<>/debian/tmp/bin/ install -p -m 0775 immv /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/fslio' make[4]: Entering directory '/<>/src/fslio' make[5]: Entering directory '/<>/src/fslio' Installing stable header files install -p -m 0664 dbh.h /<>/include/fslio/ install -p -m 0664 fslio.h /<>/include/fslio/ make[5]: Leaving directory '/<>/src/fslio' make[5]: Entering directory '/<>/src/fslio' Installing stable library archives install -p -m 0664 libfslio.so /<>/lib make[5]: Leaving directory '/<>/src/fslio' make[5]: Entering directory '/<>/src/fslio' Installing tcl scripts install -p -m 0775 fslio.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/fslio' make[5]: Entering directory '/<>/src/fslio' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fslio/ make[5]: Leaving directory '/<>/src/fslio' make[5]: Entering directory '/<>/src/fslio' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fslio/ make[5]: Leaving directory '/<>/src/fslio' make[5]: Entering directory '/<>/src/fslio' make[5]: Leaving directory '/<>/src/fslio' make[4]: Leaving directory '/<>/src/fslio' make[3]: Leaving directory '/<>/src/fslio' make[2]: Leaving directory '/<>/src/fslio' make[1]: Leaving directory '/<>/src/fslio' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/miscmaths make[1]: Entering directory '/<>/src/miscmaths' g++ -shared -o libmiscmaths.so miscmaths.o optimise.o miscprob.o kernel.o histogram.o base2z.o t2z.o f2z.o minimize.o cspline.o sparse_matrix.o sparsefn.o rungekutta.o nonlin.o bfmatrix.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L. -L/<>/lib -L/<>/lib -lnewmat -lutils -lfslio -lniftiio -lprob make[1]: Leaving directory '/<>/src/miscmaths' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/miscmaths install make[1]: Entering directory '/<>/src/miscmaths' make[2]: Entering directory '/<>/src/miscmaths' make[3]: Entering directory '/<>/src/miscmaths' g++ -shared -o libmiscmaths.so miscmaths.o optimise.o miscprob.o kernel.o histogram.o base2z.o t2z.o f2z.o minimize.o cspline.o sparse_matrix.o sparsefn.o rungekutta.o nonlin.o bfmatrix.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L. -L/<>/lib -L/<>/lib -lnewmat -lutils -lfslio -lniftiio -lprob make[3]: Leaving directory '/<>/src/miscmaths' make[3]: Entering directory '/<>/src/miscmaths' make[4]: Entering directory '/<>/src/miscmaths' Installing stable binaries make[4]: Leaving directory '/<>/src/miscmaths' make[4]: Entering directory '/<>/src/miscmaths' make[5]: Entering directory '/<>/src/miscmaths' Installing stable header files install -p -m 0664 SpMat.h /<>/include/miscmaths/ install -p -m 0664 base2z.h /<>/include/miscmaths/ install -p -m 0664 bfmatrix.h /<>/include/miscmaths/ install -p -m 0664 bicg.h /<>/include/miscmaths/ install -p -m 0664 bicgstab.h /<>/include/miscmaths/ install -p -m 0664 cg.h /<>/include/miscmaths/ install -p -m 0664 cgs.h /<>/include/miscmaths/ install -p -m 0664 cheby.h /<>/include/miscmaths/ install -p -m 0664 cspline.h /<>/include/miscmaths/ install -p -m 0664 f2z.h /<>/include/miscmaths/ install -p -m 0664 histogram.h /<>/include/miscmaths/ install -p -m 0664 ir.h /<>/include/miscmaths/ install -p -m 0664 kernel.h /<>/include/miscmaths/ install -p -m 0664 minimize.h /<>/include/miscmaths/ install -p -m 0664 miscmaths.h /<>/include/miscmaths/ install -p -m 0664 miscprob.h /<>/include/miscmaths/ install -p -m 0664 nonlin.h /<>/include/miscmaths/ install -p -m 0664 optimise.h /<>/include/miscmaths/ install -p -m 0664 qmr.h /<>/include/miscmaths/ install -p -m 0664 rungekutta.h /<>/include/miscmaths/ install -p -m 0664 sparse_matrix.h /<>/include/miscmaths/ install -p -m 0664 sparsefn.h /<>/include/miscmaths/ install -p -m 0664 splinterpolator.h /<>/include/miscmaths/ install -p -m 0664 t2z.h /<>/include/miscmaths/ make[5]: Leaving directory '/<>/src/miscmaths' make[5]: Entering directory '/<>/src/miscmaths' Installing stable library archives install -p -m 0664 libmiscmaths.so /<>/lib make[5]: Leaving directory '/<>/src/miscmaths' make[5]: Entering directory '/<>/src/miscmaths' Installing tcl scripts make[5]: Leaving directory '/<>/src/miscmaths' make[5]: Entering directory '/<>/src/miscmaths' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/miscmaths/ make[5]: Leaving directory '/<>/src/miscmaths' make[5]: Entering directory '/<>/src/miscmaths' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/miscmaths/ make[5]: Leaving directory '/<>/src/miscmaths' make[5]: Entering directory '/<>/src/miscmaths' make[5]: Leaving directory '/<>/src/miscmaths' make[4]: Leaving directory '/<>/src/miscmaths' make[3]: Leaving directory '/<>/src/miscmaths' make[2]: Leaving directory '/<>/src/miscmaths' make[1]: Leaving directory '/<>/src/miscmaths' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/newimage make[1]: Entering directory '/<>/src/newimage' g++ -shared -o libnewimage.so lazy.o newimage.o generalio.o newimagefns.o complexvolume.o imfft.o costfns.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lnewmat -lfslio -lmiscmaths -lniftiio make[1]: Leaving directory '/<>/src/newimage' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/newimage install make[1]: Entering directory '/<>/src/newimage' make[2]: Entering directory '/<>/src/newimage' make[3]: Entering directory '/<>/src/newimage' g++ -shared -o libnewimage.so lazy.o newimage.o generalio.o newimagefns.o complexvolume.o imfft.o costfns.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lnewmat -lfslio -lmiscmaths -lniftiio make[3]: Leaving directory '/<>/src/newimage' make[3]: Entering directory '/<>/src/newimage' make[4]: Entering directory '/<>/src/newimage' Installing stable binaries make[4]: Leaving directory '/<>/src/newimage' make[4]: Entering directory '/<>/src/newimage' make[5]: Entering directory '/<>/src/newimage' Installing stable header files install -p -m 0664 complexvolume.h /<>/include/newimage/ install -p -m 0664 costfns.h /<>/include/newimage/ install -p -m 0664 fmribmain.h /<>/include/newimage/ install -p -m 0664 fmribmain2.h /<>/include/newimage/ install -p -m 0664 imfft.h /<>/include/newimage/ install -p -m 0664 lazy.h /<>/include/newimage/ install -p -m 0664 lazyiterators.h /<>/include/newimage/ install -p -m 0664 newimage.h /<>/include/newimage/ install -p -m 0664 newimageall.h /<>/include/newimage/ install -p -m 0664 newimagefns.h /<>/include/newimage/ install -p -m 0664 newimageio.h /<>/include/newimage/ install -p -m 0664 positerators.h /<>/include/newimage/ make[5]: Leaving directory '/<>/src/newimage' make[5]: Entering directory '/<>/src/newimage' Installing stable library archives install -p -m 0664 libnewimage.so /<>/lib make[5]: Leaving directory '/<>/src/newimage' make[5]: Entering directory '/<>/src/newimage' Installing tcl scripts make[5]: Leaving directory '/<>/src/newimage' make[5]: Entering directory '/<>/src/newimage' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/newimage/ make[5]: Leaving directory '/<>/src/newimage' make[5]: Entering directory '/<>/src/newimage' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/newimage/ make[5]: Leaving directory '/<>/src/newimage' make[5]: Entering directory '/<>/src/newimage' make[5]: Leaving directory '/<>/src/newimage' make[4]: Leaving directory '/<>/src/newimage' make[3]: Leaving directory '/<>/src/newimage' make[2]: Leaving directory '/<>/src/newimage' make[1]: Leaving directory '/<>/src/newimage' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/libvis make[1]: Entering directory '/<>/src/libvis' g++ -shared -o libmiscplot.so miscplot.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewmat -lgd -lgdc -lmiscmaths -lfslio -lprob -lniftiio g++ -shared -o libmiscpic.so miscpic.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewimage -lgd -lfslio -lmiscmaths -lnewmat -lniftiio make[1]: Leaving directory '/<>/src/libvis' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/libvis install make[1]: Entering directory '/<>/src/libvis' make[2]: Entering directory '/<>/src/libvis' make[3]: Entering directory '/<>/src/libvis' g++ -shared -o libmiscplot.so miscplot.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewmat -lgd -lgdc -lmiscmaths -lfslio -lprob -lniftiio g++ -shared -o libmiscpic.so miscpic.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lnewimage -lgd -lfslio -lmiscmaths -lnewmat -lniftiio make[3]: Leaving directory '/<>/src/libvis' make[3]: Entering directory '/<>/src/libvis' make[4]: Entering directory '/<>/src/libvis' Installing stable binaries make[4]: Leaving directory '/<>/src/libvis' make[4]: Entering directory '/<>/src/libvis' make[5]: Entering directory '/<>/src/libvis' Installing stable header files install -p -m 0664 miscpic.h /<>/include/libvis/ install -p -m 0664 miscplot.h /<>/include/libvis/ make[5]: Leaving directory '/<>/src/libvis' make[5]: Entering directory '/<>/src/libvis' Installing stable library archives install -p -m 0664 libmiscpic.so /<>/lib install -p -m 0664 libmiscplot.so /<>/lib make[5]: Leaving directory '/<>/src/libvis' make[5]: Entering directory '/<>/src/libvis' Installing tcl scripts make[5]: Leaving directory '/<>/src/libvis' make[5]: Entering directory '/<>/src/libvis' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/libvis/ make[5]: Leaving directory '/<>/src/libvis' make[5]: Entering directory '/<>/src/libvis' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/libvis/ make[5]: Leaving directory '/<>/src/libvis' make[5]: Entering directory '/<>/src/libvis' make[5]: Leaving directory '/<>/src/libvis' make[4]: Leaving directory '/<>/src/libvis' make[3]: Leaving directory '/<>/src/libvis' make[2]: Leaving directory '/<>/src/libvis' make[1]: Leaving directory '/<>/src/libvis' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/first_lib make[1]: Entering directory '/<>/src/first_lib' ar -r libfirst_lib.a first_mesh.o first_newmat_vec.o make[1]: Leaving directory '/<>/src/first_lib' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/first_lib install make[1]: Entering directory '/<>/src/first_lib' make[2]: Entering directory '/<>/src/first_lib' make[3]: Entering directory '/<>/src/first_lib' ar -r libfirst_lib.a first_mesh.o first_newmat_vec.o make[3]: Leaving directory '/<>/src/first_lib' make[3]: Entering directory '/<>/src/first_lib' make[4]: Entering directory '/<>/src/first_lib' Installing stable binaries make[4]: Leaving directory '/<>/src/first_lib' make[4]: Entering directory '/<>/src/first_lib' make[5]: Entering directory '/<>/src/first_lib' Installing stable header files install -p -m 0664 first_mesh.h /<>/include/first_lib/ install -p -m 0664 first_newmat_vec.h /<>/include/first_lib/ make[5]: Leaving directory '/<>/src/first_lib' make[5]: Entering directory '/<>/src/first_lib' Installing stable library archives install -p -m 0664 libfirst_lib.a /<>/lib make[5]: Leaving directory '/<>/src/first_lib' make[5]: Entering directory '/<>/src/first_lib' Installing tcl scripts make[5]: Leaving directory '/<>/src/first_lib' make[5]: Entering directory '/<>/src/first_lib' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/first_lib/ make[5]: Leaving directory '/<>/src/first_lib' make[5]: Entering directory '/<>/src/first_lib' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/first_lib/ make[5]: Leaving directory '/<>/src/first_lib' make[5]: Entering directory '/<>/src/first_lib' make[5]: Leaving directory '/<>/src/first_lib' make[4]: Leaving directory '/<>/src/first_lib' make[3]: Leaving directory '/<>/src/first_lib' make[2]: Leaving directory '/<>/src/first_lib' make[1]: Leaving directory '/<>/src/first_lib' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/meshclass make[1]: Entering directory '/<>/src/meshclass' g++ -shared -o libmeshclass.so point.o mpoint.o triangle.o mesh.o pt_special.o profile.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC make[1]: Leaving directory '/<>/src/meshclass' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/meshclass install make[1]: Entering directory '/<>/src/meshclass' make[2]: Entering directory '/<>/src/meshclass' make[3]: Entering directory '/<>/src/meshclass' g++ -shared -o libmeshclass.so point.o mpoint.o triangle.o mesh.o pt_special.o profile.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC make[3]: Leaving directory '/<>/src/meshclass' make[3]: Entering directory '/<>/src/meshclass' make[4]: Entering directory '/<>/src/meshclass' Installing stable binaries install -p -m 0775 drawmesh /<>/debian/tmp/bin/ install -p -m 0775 selfintersection /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/meshclass' make[4]: Entering directory '/<>/src/meshclass' make[5]: Entering directory '/<>/src/meshclass' Installing stable header files install -p -m 0664 mesh.h /<>/include/meshclass/ install -p -m 0664 meshclass.h /<>/include/meshclass/ install -p -m 0664 mpoint.h /<>/include/meshclass/ install -p -m 0664 point.h /<>/include/meshclass/ install -p -m 0664 profile.h /<>/include/meshclass/ install -p -m 0664 pt_special.h /<>/include/meshclass/ install -p -m 0664 triangle.h /<>/include/meshclass/ make[5]: Leaving directory '/<>/src/meshclass' make[5]: Entering directory '/<>/src/meshclass' Installing stable library archives install -p -m 0664 libmeshclass.so /<>/lib make[5]: Leaving directory '/<>/src/meshclass' make[5]: Entering directory '/<>/src/meshclass' Installing tcl scripts make[5]: Leaving directory '/<>/src/meshclass' make[5]: Entering directory '/<>/src/meshclass' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/meshclass/ make[5]: Leaving directory '/<>/src/meshclass' make[5]: Entering directory '/<>/src/meshclass' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/meshclass/ make[5]: Leaving directory '/<>/src/meshclass' make[5]: Entering directory '/<>/src/meshclass' make[5]: Leaving directory '/<>/src/meshclass' make[4]: Leaving directory '/<>/src/meshclass' make[3]: Leaving directory '/<>/src/meshclass' make[2]: Leaving directory '/<>/src/meshclass' make[1]: Leaving directory '/<>/src/meshclass' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslvtkio make[1]: Entering directory '/<>/src/fslvtkio' g++ -shared -o libfslvtkio.so fslvtkio.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz make[1]: Leaving directory '/<>/src/fslvtkio' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslvtkio install make[1]: Entering directory '/<>/src/fslvtkio' make[2]: Entering directory '/<>/src/fslvtkio' make[3]: Entering directory '/<>/src/fslvtkio' g++ -shared -o libfslvtkio.so fslvtkio.o -fPIC -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lz make[3]: Leaving directory '/<>/src/fslvtkio' make[3]: Entering directory '/<>/src/fslvtkio' make[4]: Entering directory '/<>/src/fslvtkio' Installing stable binaries make[4]: Leaving directory '/<>/src/fslvtkio' make[4]: Entering directory '/<>/src/fslvtkio' make[5]: Entering directory '/<>/src/fslvtkio' Installing stable header files install -p -m 0664 fslvtkio.h /<>/include/fslvtkio/ make[5]: Leaving directory '/<>/src/fslvtkio' make[5]: Entering directory '/<>/src/fslvtkio' Installing stable library archives install -p -m 0664 libfslvtkio.so /<>/lib make[5]: Leaving directory '/<>/src/fslvtkio' make[5]: Entering directory '/<>/src/fslvtkio' Installing tcl scripts make[5]: Leaving directory '/<>/src/fslvtkio' make[5]: Entering directory '/<>/src/fslvtkio' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fslvtkio/ make[5]: Leaving directory '/<>/src/fslvtkio' make[5]: Entering directory '/<>/src/fslvtkio' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fslvtkio/ make[5]: Leaving directory '/<>/src/fslvtkio' make[5]: Entering directory '/<>/src/fslvtkio' make[5]: Leaving directory '/<>/src/fslvtkio' make[4]: Leaving directory '/<>/src/fslvtkio' make[3]: Leaving directory '/<>/src/fslvtkio' make[2]: Leaving directory '/<>/src/fslvtkio' make[1]: Leaving directory '/<>/src/fslvtkio' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_tcl make[1]: Entering directory '/<>/src/misc_tcl' install -p -m 0775 Runtcl /<>/debian/tmp/bin ; \ /bin/cp -r BWidget /<>/debian/tmp/tcl/ ; \ cd /<>/debian/tmp/bin ; \ /bin/rm -f fsl fsl_gui ; \ ln -s Runtcl fsl ; \ ln -s Runtcl fsl_gui make[1]: Leaving directory '/<>/src/misc_tcl' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_tcl install make[1]: Entering directory '/<>/src/misc_tcl' make[2]: Entering directory '/<>/src/misc_tcl' make[3]: Entering directory '/<>/src/misc_tcl' install -p -m 0775 Runtcl /<>/debian/tmp/bin ; \ /bin/cp -r BWidget /<>/debian/tmp/tcl/ ; \ cd /<>/debian/tmp/bin ; \ /bin/rm -f fsl fsl_gui ; \ ln -s Runtcl fsl ; \ ln -s Runtcl fsl_gui make[3]: Leaving directory '/<>/src/misc_tcl' make[3]: Entering directory '/<>/src/misc_tcl' make[4]: Entering directory '/<>/src/misc_tcl' Installing stable binaries make[4]: Leaving directory '/<>/src/misc_tcl' make[4]: Entering directory '/<>/src/misc_tcl' make[5]: Entering directory '/<>/src/misc_tcl' Installing stable header files make[5]: Leaving directory '/<>/src/misc_tcl' make[5]: Entering directory '/<>/src/misc_tcl' Installing stable library archives make[5]: Leaving directory '/<>/src/misc_tcl' make[5]: Entering directory '/<>/src/misc_tcl' Installing tcl scripts install -p -m 0775 TkWidgets.tcl /<>/debian/tmp/tcl/ install -p -m 0775 balloon.tcl /<>/debian/tmp/tcl/ install -p -m 0775 collapsible.tcl /<>/debian/tmp/tcl/ install -p -m 0775 fix_cygwin_filename.tcl /<>/debian/tmp/tcl/ install -p -m 0775 fsl.tcl /<>/debian/tmp/tcl/ install -p -m 0775 fsl_exec.tcl /<>/debian/tmp/tcl/ install -p -m 0775 fsl_file.tcl /<>/debian/tmp/tcl/ install -p -m 0775 fsl_filelv.tcl /<>/debian/tmp/tcl/ install -p -m 0775 fslstart.tcl /<>/debian/tmp/tcl/ install -p -m 0775 misc_func.tcl /<>/debian/tmp/tcl/ install -p -m 0775 new_filename.tcl /<>/debian/tmp/tcl/ install -p -m 0775 webhelp.tcl /<>/debian/tmp/tcl/ install -p -m 0775 arrow.xbm /<>/debian/tmp/tcl/ install -p -m 0775 file.xbm /<>/debian/tmp/tcl/ install -p -m 0775 filltriangled.xbm /<>/debian/tmp/tcl/ install -p -m 0775 fmrib.xbm /<>/debian/tmp/tcl/ install -p -m 0775 triangled.xbm /<>/debian/tmp/tcl/ install -p -m 0775 triangler.xbm /<>/debian/tmp/tcl/ install -p -m 0775 fsl-logo-tiny.ppm /<>/debian/tmp/tcl/ install -p -m 0775 fsl-logo-tiny.ico /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/misc_tcl' make[5]: Entering directory '/<>/src/misc_tcl' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/misc_tcl/ make[5]: Leaving directory '/<>/src/misc_tcl' make[5]: Entering directory '/<>/src/misc_tcl' Installing reference documents /bin/cp -R -f refdoc/FSLFileEntry.html /<>/debian/tmp/refdoc/misc_tcl/ /bin/cp -R -f refdoc/FSLFileEntry.xml /<>/debian/tmp/refdoc/misc_tcl/ /bin/chmod -R ug+w /<>/debian/tmp/refdoc/misc_tcl/ make[5]: Leaving directory '/<>/src/misc_tcl' make[5]: Entering directory '/<>/src/misc_tcl' make[5]: Leaving directory '/<>/src/misc_tcl' make[4]: Leaving directory '/<>/src/misc_tcl' make[3]: Leaving directory '/<>/src/misc_tcl' make[2]: Leaving directory '/<>/src/misc_tcl' make[1]: Leaving directory '/<>/src/misc_tcl' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/basisfield make[1]: Entering directory '/<>/src/basisfield' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/basisfield' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/basisfield install make[1]: Entering directory '/<>/src/basisfield' make[2]: Entering directory '/<>/src/basisfield' make[3]: Entering directory '/<>/src/basisfield' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/basisfield' make[3]: Entering directory '/<>/src/basisfield' make[4]: Entering directory '/<>/src/basisfield' Installing stable binaries make[4]: Leaving directory '/<>/src/basisfield' make[4]: Entering directory '/<>/src/basisfield' make[5]: Entering directory '/<>/src/basisfield' Installing stable header files install -p -m 0664 basisfield.h /<>/include/basisfield/ install -p -m 0664 dctfield.h /<>/include/basisfield/ install -p -m 0664 fsl_splines.h /<>/include/basisfield/ install -p -m 0664 splinefield.h /<>/include/basisfield/ install -p -m 0664 splines.h /<>/include/basisfield/ make[5]: Leaving directory '/<>/src/basisfield' make[5]: Entering directory '/<>/src/basisfield' Installing stable library archives install -p -m 0664 libbasisfield.a /<>/lib make[5]: Leaving directory '/<>/src/basisfield' make[5]: Entering directory '/<>/src/basisfield' Installing tcl scripts make[5]: Leaving directory '/<>/src/basisfield' make[5]: Entering directory '/<>/src/basisfield' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/basisfield/ make[5]: Leaving directory '/<>/src/basisfield' make[5]: Entering directory '/<>/src/basisfield' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/basisfield/ make[5]: Leaving directory '/<>/src/basisfield' make[5]: Entering directory '/<>/src/basisfield' make[5]: Leaving directory '/<>/src/basisfield' make[4]: Leaving directory '/<>/src/basisfield' make[3]: Leaving directory '/<>/src/basisfield' make[2]: Leaving directory '/<>/src/basisfield' make[1]: Leaving directory '/<>/src/basisfield' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/warpfns make[1]: Entering directory '/<>/src/warpfns' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/warpfns' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/warpfns install make[1]: Entering directory '/<>/src/warpfns' make[2]: Entering directory '/<>/src/warpfns' make[3]: Entering directory '/<>/src/warpfns' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/warpfns' make[3]: Entering directory '/<>/src/warpfns' make[4]: Entering directory '/<>/src/warpfns' Installing stable binaries make[4]: Leaving directory '/<>/src/warpfns' make[4]: Entering directory '/<>/src/warpfns' make[5]: Entering directory '/<>/src/warpfns' Installing stable header files install -p -m 0664 fnirt_file_reader.h /<>/include/warpfns/ install -p -m 0664 fnirt_file_writer.h /<>/include/warpfns/ install -p -m 0664 point_list.h /<>/include/warpfns/ install -p -m 0664 warpfns.h /<>/include/warpfns/ make[5]: Leaving directory '/<>/src/warpfns' make[5]: Entering directory '/<>/src/warpfns' Installing stable library archives install -p -m 0664 libwarpfns.a /<>/lib make[5]: Leaving directory '/<>/src/warpfns' make[5]: Entering directory '/<>/src/warpfns' Installing tcl scripts make[5]: Leaving directory '/<>/src/warpfns' make[5]: Entering directory '/<>/src/warpfns' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/warpfns/ make[5]: Leaving directory '/<>/src/warpfns' make[5]: Entering directory '/<>/src/warpfns' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/warpfns/ make[5]: Leaving directory '/<>/src/warpfns' make[5]: Entering directory '/<>/src/warpfns' make[5]: Leaving directory '/<>/src/warpfns' make[4]: Leaving directory '/<>/src/warpfns' make[3]: Leaving directory '/<>/src/warpfns' make[2]: Leaving directory '/<>/src/warpfns' make[1]: Leaving directory '/<>/src/warpfns' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/bint make[1]: Entering directory '/<>/src/bint' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/bint' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/bint install make[1]: Entering directory '/<>/src/bint' make[2]: Entering directory '/<>/src/bint' make[3]: Entering directory '/<>/src/bint' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/bint' make[3]: Entering directory '/<>/src/bint' make[4]: Entering directory '/<>/src/bint' Installing stable binaries install -p -m 0775 mean /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/bint' make[4]: Entering directory '/<>/src/bint' make[5]: Entering directory '/<>/src/bint' Installing stable header files install -p -m 0664 bintoptions.h /<>/include/bint/ install -p -m 0664 lslaplacemanager.h /<>/include/bint/ install -p -m 0664 lsmcmcmanager.h /<>/include/bint/ install -p -m 0664 meanoptions.h /<>/include/bint/ install -p -m 0664 model.h /<>/include/bint/ make[5]: Leaving directory '/<>/src/bint' make[5]: Entering directory '/<>/src/bint' Installing stable library archives install -p -m 0664 libbint.a /<>/lib make[5]: Leaving directory '/<>/src/bint' make[5]: Entering directory '/<>/src/bint' Installing tcl scripts make[5]: Leaving directory '/<>/src/bint' make[5]: Entering directory '/<>/src/bint' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/bint/ make[5]: Leaving directory '/<>/src/bint' make[5]: Entering directory '/<>/src/bint' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/bint/ make[5]: Leaving directory '/<>/src/bint' make[5]: Entering directory '/<>/src/bint' make[5]: Leaving directory '/<>/src/bint' make[4]: Leaving directory '/<>/src/bint' make[3]: Leaving directory '/<>/src/bint' make[2]: Leaving directory '/<>/src/bint' make[1]: Leaving directory '/<>/src/bint' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/shapeModel make[1]: Entering directory '/<>/src/shapeModel' g++ -shared -o libshapeModel.so shapeModel.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lmeshclass -lnewimage -lnewmat -lfirst_lib -lfslvtkio -lmiscmaths make[1]: Leaving directory '/<>/src/shapeModel' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/shapeModel install make[1]: Entering directory '/<>/src/shapeModel' make[2]: Entering directory '/<>/src/shapeModel' make[3]: Entering directory '/<>/src/shapeModel' g++ -shared -o libshapeModel.so shapeModel.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lmeshclass -lnewimage -lnewmat -lfirst_lib -lfslvtkio -lmiscmaths make[3]: Leaving directory '/<>/src/shapeModel' make[3]: Entering directory '/<>/src/shapeModel' make[4]: Entering directory '/<>/src/shapeModel' Installing stable binaries make[4]: Leaving directory '/<>/src/shapeModel' make[4]: Entering directory '/<>/src/shapeModel' make[5]: Entering directory '/<>/src/shapeModel' Installing stable header files install -p -m 0664 shapeModel.h /<>/include/shapeModel/ make[5]: Leaving directory '/<>/src/shapeModel' make[5]: Entering directory '/<>/src/shapeModel' Installing stable library archives install -p -m 0664 libshapeModel.so /<>/lib make[5]: Leaving directory '/<>/src/shapeModel' make[5]: Entering directory '/<>/src/shapeModel' Installing tcl scripts make[5]: Leaving directory '/<>/src/shapeModel' make[5]: Entering directory '/<>/src/shapeModel' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/shapeModel/ make[5]: Leaving directory '/<>/src/shapeModel' make[5]: Entering directory '/<>/src/shapeModel' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/shapeModel/ make[5]: Leaving directory '/<>/src/shapeModel' make[5]: Entering directory '/<>/src/shapeModel' make[5]: Leaving directory '/<>/src/shapeModel' make[4]: Leaving directory '/<>/src/shapeModel' make[3]: Leaving directory '/<>/src/shapeModel' make[2]: Leaving directory '/<>/src/shapeModel' make[1]: Leaving directory '/<>/src/shapeModel' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/MVdisc make[1]: Entering directory '/<>/src/MVdisc' ar -r libMVdisc.a MVdisc.o make[1]: Leaving directory '/<>/src/MVdisc' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/MVdisc install make[1]: Entering directory '/<>/src/MVdisc' make[2]: Entering directory '/<>/src/MVdisc' make[3]: Entering directory '/<>/src/MVdisc' ar -r libMVdisc.a MVdisc.o make[3]: Leaving directory '/<>/src/MVdisc' make[3]: Entering directory '/<>/src/MVdisc' make[4]: Entering directory '/<>/src/MVdisc' Installing stable binaries make[4]: Leaving directory '/<>/src/MVdisc' make[4]: Entering directory '/<>/src/MVdisc' make[5]: Entering directory '/<>/src/MVdisc' Installing stable header files install -p -m 0664 MVdisc.h /<>/include/MVdisc/ make[5]: Leaving directory '/<>/src/MVdisc' make[5]: Entering directory '/<>/src/MVdisc' Installing stable library archives install -p -m 0664 libMVdisc.a /<>/lib make[5]: Leaving directory '/<>/src/MVdisc' make[5]: Entering directory '/<>/src/MVdisc' Installing tcl scripts make[5]: Leaving directory '/<>/src/MVdisc' make[5]: Entering directory '/<>/src/MVdisc' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/MVdisc/ make[5]: Leaving directory '/<>/src/MVdisc' make[5]: Entering directory '/<>/src/MVdisc' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/MVdisc/ make[5]: Leaving directory '/<>/src/MVdisc' make[5]: Entering directory '/<>/src/MVdisc' make[5]: Leaving directory '/<>/src/MVdisc' make[4]: Leaving directory '/<>/src/MVdisc' make[3]: Leaving directory '/<>/src/MVdisc' make[2]: Leaving directory '/<>/src/MVdisc' make[1]: Leaving directory '/<>/src/MVdisc' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslsurface make[1]: Entering directory '/<>/src/fslsurface' ar -r libfslsurface.a fslsurfacefns.o fslsurfaceio.o fslsurface.o ar -r libfslsurface_backcompat.a fslsurface_first.o fslsurface_dataconv.o g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/<>/include/niftiio -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslsurfacemaths fslsurfacemaths.o fslsurfaceio.o fslsurfacefns.o fslsurface_first.o fslsurface.o -lgiftiio -lexpat -lfirst_lib -lmeshclass -lshapeModel -lfslvtkio -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lprob -lz -lGL -lGLU make[1]: Leaving directory '/<>/src/fslsurface' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslsurface install make[1]: Entering directory '/<>/src/fslsurface' make[2]: Entering directory '/<>/src/fslsurface' make[3]: Entering directory '/<>/src/fslsurface' ar -r libfslsurface.a fslsurfacefns.o fslsurfaceio.o fslsurface.o ar -r libfslsurface_backcompat.a fslsurface_first.o fslsurface_dataconv.o g++ -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src -I/usr/include/newmat -I/<>/extras/include/libprob -I/usr/include -I/<>/include/niftiio -I. -I/<>/include -I/<>/include -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -o fslsurfacemaths fslsurfacemaths.o fslsurfaceio.o fslsurfacefns.o fslsurface_first.o fslsurface.o -lgiftiio -lexpat -lfirst_lib -lmeshclass -lshapeModel -lfslvtkio -lmeshclass -lnewimage -lmiscmaths -lfslio -lniftiio -lznz -lnewmat -lutils -lprob -lz -lGL -lGLU make[3]: Leaving directory '/<>/src/fslsurface' make[3]: Entering directory '/<>/src/fslsurface' make[4]: Entering directory '/<>/src/fslsurface' Installing stable binaries install -p -m 0775 fslsurfacemaths /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/fslsurface' make[4]: Entering directory '/<>/src/fslsurface' make[5]: Entering directory '/<>/src/fslsurface' Installing stable header files install -p -m 0664 fslsurface.h /<>/include/fslsurface/ install -p -m 0664 fslsurface_dataconv.h /<>/include/fslsurface/ install -p -m 0664 fslsurface_first.h /<>/include/fslsurface/ install -p -m 0664 fslsurface_structs.h /<>/include/fslsurface/ install -p -m 0664 fslsurfacefns.h /<>/include/fslsurface/ install -p -m 0664 fslsurfacegl.h /<>/include/fslsurface/ install -p -m 0664 fslsurfaceio.h /<>/include/fslsurface/ make[5]: Leaving directory '/<>/src/fslsurface' make[5]: Entering directory '/<>/src/fslsurface' Installing stable library archives install -p -m 0664 libfslsurface.a /<>/lib install -p -m 0664 libfslsurface_backcompat.a /<>/lib make[5]: Leaving directory '/<>/src/fslsurface' make[5]: Entering directory '/<>/src/fslsurface' Installing tcl scripts make[5]: Leaving directory '/<>/src/fslsurface' make[5]: Entering directory '/<>/src/fslsurface' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fslsurface/ make[5]: Leaving directory '/<>/src/fslsurface' make[5]: Entering directory '/<>/src/fslsurface' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fslsurface/ make[5]: Leaving directory '/<>/src/fslsurface' make[5]: Entering directory '/<>/src/fslsurface' make[5]: Leaving directory '/<>/src/fslsurface' make[4]: Leaving directory '/<>/src/fslsurface' make[3]: Leaving directory '/<>/src/fslsurface' make[2]: Leaving directory '/<>/src/fslsurface' make[1]: Leaving directory '/<>/src/fslsurface' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/libmeshutils make[1]: Entering directory '/<>/src/libmeshutils' ar -r libmeshUtils.a meshUtils.o ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[2]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. Installing stable library archives ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. install -p -m 0664 libmeshUtils.a /<>/lib ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[2]: Leaving directory '/<>/src/libmeshutils' make[1]: Leaving directory '/<>/src/libmeshutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/libmeshutils install make[1]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[2]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[3]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ar -r libmeshUtils.a meshUtils.o ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[4]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. Installing stable library archives ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. install -p -m 0664 libmeshUtils.a /<>/lib ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[4]: Leaving directory '/<>/src/libmeshutils' make[3]: Leaving directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[3]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[4]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. Installing stable binaries ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. install -p -m 0775 run_mesh_utils /<>/debian/tmp/bin/ ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[4]: Leaving directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[4]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[5]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. Installing stable header files ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. install -p -m 0664 meshUtils.h /<>/include/meshUtils/ make[5]: Leaving directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[5]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. Installing stable library archives ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. install -p -m 0664 libmeshUtils.a /<>/lib ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[5]: Leaving directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[5]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. Installing tcl scripts ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[5]: Leaving directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[5]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. Installing (userguide) documents ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /bin/chmod -R ug+w /<>/debian/tmp/doc/meshUtils/ make[5]: Leaving directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[5]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. Installing reference documents ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /bin/chmod -R ug+w /<>/debian/tmp/refdoc/meshUtils/ make[5]: Leaving directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[5]: Entering directory '/<>/src/libmeshutils' ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. make[5]: Leaving directory '/<>/src/libmeshutils' make[4]: Leaving directory '/<>/src/libmeshutils' make[3]: Leaving directory '/<>/src/libmeshutils' make[2]: Leaving directory '/<>/src/libmeshutils' make[1]: Leaving directory '/<>/src/libmeshutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/avwutils make[1]: Entering directory '/<>/src/avwutils' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/avwutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/avwutils install make[1]: Entering directory '/<>/src/avwutils' make[2]: Entering directory '/<>/src/avwutils' make[3]: Entering directory '/<>/src/avwutils' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/avwutils' make[3]: Entering directory '/<>/src/avwutils' make[4]: Entering directory '/<>/src/avwutils' Installing stable binaries install -p -m 0775 fslorient /<>/debian/tmp/bin/ install -p -m 0775 fslstats /<>/debian/tmp/bin/ install -p -m 0775 fslmerge /<>/debian/tmp/bin/ install -p -m 0775 fslpspec /<>/debian/tmp/bin/ install -p -m 0775 fslroi /<>/debian/tmp/bin/ install -p -m 0775 fslnvols /<>/debian/tmp/bin/ install -p -m 0775 fsl2ascii /<>/debian/tmp/bin/ install -p -m 0775 fslascii2img /<>/debian/tmp/bin/ install -p -m 0775 fslsplit /<>/debian/tmp/bin/ install -p -m 0775 fslcc /<>/debian/tmp/bin/ install -p -m 0775 fslinterleave /<>/debian/tmp/bin/ install -p -m 0775 fslhd /<>/debian/tmp/bin/ install -p -m 0775 fslcpgeom /<>/debian/tmp/bin/ install -p -m 0775 fslcreatehd /<>/debian/tmp/bin/ install -p -m 0775 fslcorrecthd /<>/debian/tmp/bin/ install -p -m 0775 fslmaths /<>/debian/tmp/bin/ install -p -m 0775 fslcomplex /<>/debian/tmp/bin/ install -p -m 0775 fslfft /<>/debian/tmp/bin/ install -p -m 0775 fslmeants /<>/debian/tmp/bin/ install -p -m 0775 fslslice /<>/debian/tmp/bin/ install -p -m 0775 fslswapdim_exe /<>/debian/tmp/bin/ install -p -m 0775 fslchfiletype_exe /<>/debian/tmp/bin/ install -p -m 0775 calc_grad_perc_dev /<>/debian/tmp/bin/ install -p -m 0775 fslsmoothfill /<>/debian/tmp/bin/ install -p -m 0775 fslselectvols /<>/debian/tmp/bin/ install -p -m 0775 fslval /<>/debian/tmp/bin/ install -p -m 0775 fslchpixdim /<>/debian/tmp/bin/ install -p -m 0775 fslanimate /<>/debian/tmp/bin/ install -p -m 0775 fslsize /<>/debian/tmp/bin/ install -p -m 0775 sliceanimate /<>/debian/tmp/bin/ install -p -m 0775 fslinfo /<>/debian/tmp/bin/ install -p -m 0775 fsledithd /<>/debian/tmp/bin/ install -p -m 0775 avw2fsl /<>/debian/tmp/bin/ install -p -m 0775 fslswapdim /<>/debian/tmp/bin/ install -p -m 0775 fslchfiletype /<>/debian/tmp/bin/ install -p -m 0775 fslreorient2std /<>/debian/tmp/bin/ install -p -m 0775 fslmodhd /<>/debian/tmp/bin/ install -p -m 0775 fsladd /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/avwutils' make[4]: Entering directory '/<>/src/avwutils' make[5]: Entering directory '/<>/src/avwutils' Installing stable header files make[5]: Leaving directory '/<>/src/avwutils' make[5]: Entering directory '/<>/src/avwutils' Installing stable library archives make[5]: Leaving directory '/<>/src/avwutils' make[5]: Entering directory '/<>/src/avwutils' Installing tcl scripts make[5]: Leaving directory '/<>/src/avwutils' make[5]: Entering directory '/<>/src/avwutils' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/avwutils/ make[5]: Leaving directory '/<>/src/avwutils' make[5]: Entering directory '/<>/src/avwutils' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/avwutils/ make[5]: Leaving directory '/<>/src/avwutils' make[5]: Entering directory '/<>/src/avwutils' make[5]: Leaving directory '/<>/src/avwutils' make[4]: Leaving directory '/<>/src/avwutils' make[3]: Leaving directory '/<>/src/avwutils' make[2]: Leaving directory '/<>/src/avwutils' make[1]: Leaving directory '/<>/src/avwutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/basil make[1]: Entering directory '/<>/src/basil' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/basil' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/basil install make[1]: Entering directory '/<>/src/basil' make[2]: Entering directory '/<>/src/basil' make[3]: Entering directory '/<>/src/basil' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/basil' make[3]: Entering directory '/<>/src/basil' make[4]: Entering directory '/<>/src/basil' Installing stable binaries install -p -m 0775 basil /<>/debian/tmp/bin/ install -p -m 0775 basil_var /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/basil' make[4]: Entering directory '/<>/src/basil' make[5]: Entering directory '/<>/src/basil' Installing stable header files make[5]: Leaving directory '/<>/src/basil' make[5]: Entering directory '/<>/src/basil' Installing stable library archives make[5]: Leaving directory '/<>/src/basil' make[5]: Entering directory '/<>/src/basil' Installing tcl scripts make[5]: Leaving directory '/<>/src/basil' make[5]: Entering directory '/<>/src/basil' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/basil/ make[5]: Leaving directory '/<>/src/basil' make[5]: Entering directory '/<>/src/basil' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/basil/ make[5]: Leaving directory '/<>/src/basil' make[5]: Entering directory '/<>/src/basil' make[5]: Leaving directory '/<>/src/basil' make[4]: Leaving directory '/<>/src/basil' make[3]: Leaving directory '/<>/src/basil' make[2]: Leaving directory '/<>/src/basil' make[1]: Leaving directory '/<>/src/basil' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/bet2 make[1]: Entering directory '/<>/src/bet2' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/bet2' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/bet2 install make[1]: Entering directory '/<>/src/bet2' make[2]: Entering directory '/<>/src/bet2' make[3]: Entering directory '/<>/src/bet2' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/bet2' make[3]: Entering directory '/<>/src/bet2' make[4]: Entering directory '/<>/src/bet2' Installing stable binaries install -p -m 0775 bet2 /<>/debian/tmp/bin/ install -p -m 0775 betsurf /<>/debian/tmp/bin/ install -p -m 0775 robustfov /<>/debian/tmp/bin/ install -p -m 0775 old_betall /<>/debian/tmp/bin/ install -p -m 0775 bet /<>/debian/tmp/bin/ ln -s Runtcl Bet make[4]: Leaving directory '/<>/src/bet2' make[4]: Entering directory '/<>/src/bet2' make[5]: Entering directory '/<>/src/bet2' Installing stable header files install -p -m 0664 betsurf.h /<>/include/bet2/ make[5]: Leaving directory '/<>/src/bet2' make[5]: Entering directory '/<>/src/bet2' Installing stable library archives make[5]: Leaving directory '/<>/src/bet2' make[5]: Entering directory '/<>/src/bet2' Installing tcl scripts install -p -m 0775 bet.tcl /<>/debian/tmp/tcl/ install -p -m 0775 bet_proc.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/bet2' make[5]: Entering directory '/<>/src/bet2' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/bet2/ make[5]: Leaving directory '/<>/src/bet2' make[5]: Entering directory '/<>/src/bet2' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/bet2/ make[5]: Leaving directory '/<>/src/bet2' make[5]: Entering directory '/<>/src/bet2' make[5]: Leaving directory '/<>/src/bet2' make[4]: Leaving directory '/<>/src/bet2' make[3]: Leaving directory '/<>/src/bet2' make[2]: Leaving directory '/<>/src/bet2' make[1]: Leaving directory '/<>/src/bet2' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/cluster make[1]: Entering directory '/<>/src/cluster' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/cluster' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/cluster install make[1]: Entering directory '/<>/src/cluster' make[2]: Entering directory '/<>/src/cluster' make[3]: Entering directory '/<>/src/cluster' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/cluster' make[3]: Entering directory '/<>/src/cluster' make[4]: Entering directory '/<>/src/cluster' Installing stable binaries install -p -m 0775 smoothest /<>/debian/tmp/bin/ install -p -m 0775 cluster /<>/debian/tmp/bin/ install -p -m 0775 connectedcomp /<>/debian/tmp/bin/ install -p -m 0775 cluster2html /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/cluster' make[4]: Entering directory '/<>/src/cluster' make[5]: Entering directory '/<>/src/cluster' Installing stable header files install -p -m 0664 infer.h /<>/include/cluster/ install -p -m 0664 smoothest.h /<>/include/cluster/ make[5]: Leaving directory '/<>/src/cluster' make[5]: Entering directory '/<>/src/cluster' Installing stable library archives make[5]: Leaving directory '/<>/src/cluster' make[5]: Entering directory '/<>/src/cluster' Installing tcl scripts make[5]: Leaving directory '/<>/src/cluster' make[5]: Entering directory '/<>/src/cluster' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/cluster/ make[5]: Leaving directory '/<>/src/cluster' make[5]: Entering directory '/<>/src/cluster' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/cluster/ make[5]: Leaving directory '/<>/src/cluster' make[5]: Entering directory '/<>/src/cluster' make[5]: Leaving directory '/<>/src/cluster' make[4]: Leaving directory '/<>/src/cluster' make[3]: Leaving directory '/<>/src/cluster' make[2]: Leaving directory '/<>/src/cluster' make[1]: Leaving directory '/<>/src/cluster' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fast4 make[1]: Entering directory '/<>/src/fast4' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/fast4' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fast4 install make[1]: Entering directory '/<>/src/fast4' make[2]: Entering directory '/<>/src/fast4' make[3]: Entering directory '/<>/src/fast4' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/fast4' make[3]: Entering directory '/<>/src/fast4' make[4]: Entering directory '/<>/src/fast4' Installing stable binaries install -p -m 0775 fast /<>/debian/tmp/bin/ ln -s Runtcl Fast make[4]: Leaving directory '/<>/src/fast4' make[4]: Entering directory '/<>/src/fast4' make[5]: Entering directory '/<>/src/fast4' Installing stable header files install -p -m 0664 mriseg_two.h /<>/include/fast4/ install -p -m 0664 multi_mriseg_two.h /<>/include/fast4/ make[5]: Leaving directory '/<>/src/fast4' make[5]: Entering directory '/<>/src/fast4' Installing stable library archives make[5]: Leaving directory '/<>/src/fast4' make[5]: Entering directory '/<>/src/fast4' Installing tcl scripts install -p -m 0775 fast.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/fast4' make[5]: Entering directory '/<>/src/fast4' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fast4/ make[5]: Leaving directory '/<>/src/fast4' make[5]: Entering directory '/<>/src/fast4' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fast4/ make[5]: Leaving directory '/<>/src/fast4' make[5]: Entering directory '/<>/src/fast4' make[5]: Leaving directory '/<>/src/fast4' make[4]: Leaving directory '/<>/src/fast4' make[3]: Leaving directory '/<>/src/fast4' make[2]: Leaving directory '/<>/src/fast4' make[1]: Leaving directory '/<>/src/fast4' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/feat5 make[1]: Entering directory '/<>/src/feat5' /bin/cp -rf default_flobs.flobs /<>/debian/tmp/etc /bin/cp -f featconf /<>/debian/tmp/etc/fslconf/feat.tcl make[1]: Leaving directory '/<>/src/feat5' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/feat5 install make[1]: Entering directory '/<>/src/feat5' make[2]: Entering directory '/<>/src/feat5' make[3]: Entering directory '/<>/src/feat5' /bin/cp -rf default_flobs.flobs /<>/debian/tmp/etc /bin/cp -f featconf /<>/debian/tmp/etc/fslconf/feat.tcl make[3]: Leaving directory '/<>/src/feat5' make[3]: Entering directory '/<>/src/feat5' make[4]: Entering directory '/<>/src/feat5' Installing stable binaries install -p -m 0775 cutoffcalc /<>/debian/tmp/bin/ install -p -m 0775 feat_model /<>/debian/tmp/bin/ install -p -m 0775 tsplot /<>/debian/tmp/bin/ install -p -m 0775 prewhiten /<>/debian/tmp/bin/ install -p -m 0775 generateConfounds /<>/debian/tmp/bin/ install -p -m 0775 popp /<>/debian/tmp/bin/ install -p -m 0775 pnm_evs /<>/debian/tmp/bin/ install -p -m 0775 easythresh /<>/debian/tmp/bin/ install -p -m 0775 feat /<>/debian/tmp/bin/ install -p -m 0775 mccutup /<>/debian/tmp/bin/ install -p -m 0775 renderhighres /<>/debian/tmp/bin/ install -p -m 0775 featregapply /<>/debian/tmp/bin/ install -p -m 0775 featquery /<>/debian/tmp/bin/ install -p -m 0775 fslerrorreport /<>/debian/tmp/bin/ install -p -m 0775 invfeatreg /<>/debian/tmp/bin/ install -p -m 0775 updatefeatreg /<>/debian/tmp/bin/ install -p -m 0775 estnoise /<>/debian/tmp/bin/ install -p -m 0775 perfusion_subtract /<>/debian/tmp/bin/ install -p -m 0775 match_smoothing /<>/debian/tmp/bin/ install -p -m 0775 fsl_motion_outliers /<>/debian/tmp/bin/ install -p -m 0775 feat_gm_prepare /<>/debian/tmp/bin/ install -p -m 0775 mp_diffpow.sh /<>/debian/tmp/bin/ install -p -m 0775 pnm_stage1 /<>/debian/tmp/bin/ install -p -m 0775 mainfeatreg /<>/debian/tmp/bin/ install -p -m 0775 checkFEAT /<>/debian/tmp/bin/ install -p -m 0775 setFEAT /<>/debian/tmp/bin/ install -p -m 0775 autoaq /<>/debian/tmp/bin/ ln -s Runtcl Feat ln -s Runtcl Renderhighres ln -s Runtcl Featquery ln -s Runtcl Glm ln -s Runtcl Pnm make[4]: Leaving directory '/<>/src/feat5' make[4]: Entering directory '/<>/src/feat5' make[5]: Entering directory '/<>/src/feat5' Installing stable header files install -p -m 0664 featlib.h /<>/include/feat5/ make[5]: Leaving directory '/<>/src/feat5' make[5]: Entering directory '/<>/src/feat5' Installing stable library archives make[5]: Leaving directory '/<>/src/feat5' make[5]: Entering directory '/<>/src/feat5' Installing tcl scripts install -p -m 0775 feat.tcl /<>/debian/tmp/tcl/ install -p -m 0775 featlib.tcl /<>/debian/tmp/tcl/ install -p -m 0775 featquery.tcl /<>/debian/tmp/tcl/ install -p -m 0775 glm.tcl /<>/debian/tmp/tcl/ install -p -m 0775 pnm.tcl /<>/debian/tmp/tcl/ install -p -m 0775 renderhighres.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/feat5' make[5]: Entering directory '/<>/src/feat5' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/feat5/ make[5]: Leaving directory '/<>/src/feat5' make[5]: Entering directory '/<>/src/feat5' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/feat5/ make[5]: Leaving directory '/<>/src/feat5' make[5]: Entering directory '/<>/src/feat5' make[5]: Leaving directory '/<>/src/feat5' make[4]: Leaving directory '/<>/src/feat5' make[3]: Leaving directory '/<>/src/feat5' make[2]: Leaving directory '/<>/src/feat5' make[1]: Leaving directory '/<>/src/feat5' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/film make[1]: Entering directory '/<>/src/film' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/film' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/film install make[1]: Entering directory '/<>/src/film' make[2]: Entering directory '/<>/src/film' make[3]: Entering directory '/<>/src/film' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/film' make[3]: Entering directory '/<>/src/film' make[4]: Entering directory '/<>/src/film' Installing stable binaries install -p -m 0775 film_gls /<>/debian/tmp/bin/ install -p -m 0775 contrast_mgr /<>/debian/tmp/bin/ install -p -m 0775 ttoz /<>/debian/tmp/bin/ install -p -m 0775 ftoz /<>/debian/tmp/bin/ install -p -m 0775 ttologp /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/film' make[4]: Entering directory '/<>/src/film' make[5]: Entering directory '/<>/src/film' Installing stable header files install -p -m 0664 AutoCorrEstimator.h /<>/include/film/ install -p -m 0664 ContrastMgr.h /<>/include/film/ install -p -m 0664 ContrastMgrOptions.h /<>/include/film/ install -p -m 0664 FilmGlsOptions.h /<>/include/film/ install -p -m 0664 FilmGlsOptionsRes.h /<>/include/film/ install -p -m 0664 FilmOlsOptions.h /<>/include/film/ install -p -m 0664 gaussComparer.h /<>/include/film/ install -p -m 0664 glimGls.h /<>/include/film/ install -p -m 0664 glm.h /<>/include/film/ install -p -m 0664 histogram.h /<>/include/film/ install -p -m 0664 paradigm.h /<>/include/film/ make[5]: Leaving directory '/<>/src/film' make[5]: Entering directory '/<>/src/film' Installing stable library archives make[5]: Leaving directory '/<>/src/film' make[5]: Entering directory '/<>/src/film' Installing tcl scripts make[5]: Leaving directory '/<>/src/film' make[5]: Entering directory '/<>/src/film' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/film/ make[5]: Leaving directory '/<>/src/film' make[5]: Entering directory '/<>/src/film' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/film/ make[5]: Leaving directory '/<>/src/film' make[5]: Entering directory '/<>/src/film' make[5]: Leaving directory '/<>/src/film' make[4]: Leaving directory '/<>/src/film' make[3]: Leaving directory '/<>/src/film' make[2]: Leaving directory '/<>/src/film' make[1]: Leaving directory '/<>/src/film' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/filmbabe make[1]: Entering directory '/<>/src/filmbabe' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/filmbabe' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/filmbabe install make[1]: Entering directory '/<>/src/filmbabe' make[2]: Entering directory '/<>/src/filmbabe' make[3]: Entering directory '/<>/src/filmbabe' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/filmbabe' make[3]: Entering directory '/<>/src/filmbabe' make[4]: Entering directory '/<>/src/filmbabe' Installing stable binaries install -p -m 0775 filmbabe /<>/debian/tmp/bin/ install -p -m 0775 halfcosbasis /<>/debian/tmp/bin/ install -p -m 0775 filmbabescript /<>/debian/tmp/bin/ ln -s Runtcl Make_flobs make[4]: Leaving directory '/<>/src/filmbabe' make[4]: Entering directory '/<>/src/filmbabe' make[5]: Entering directory '/<>/src/filmbabe' Installing stable header files install -p -m 0664 connected_offset.h /<>/include/filmbabe/ install -p -m 0664 filmbabe_manager.h /<>/include/filmbabe/ install -p -m 0664 filmbabe_vb_flobs.h /<>/include/filmbabe/ install -p -m 0664 filmbabeoptions.h /<>/include/filmbabe/ install -p -m 0664 halfcosbasisoptions.h /<>/include/filmbabe/ make[5]: Leaving directory '/<>/src/filmbabe' make[5]: Entering directory '/<>/src/filmbabe' Installing stable library archives make[5]: Leaving directory '/<>/src/filmbabe' make[5]: Entering directory '/<>/src/filmbabe' Installing tcl scripts install -p -m 0775 make_flobs.tcl /<>/debian/tmp/tcl/ install -p -m 0775 halfcoshrfparams.ppm /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/filmbabe' make[5]: Entering directory '/<>/src/filmbabe' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/filmbabe/ make[5]: Leaving directory '/<>/src/filmbabe' make[5]: Entering directory '/<>/src/filmbabe' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/filmbabe/ make[5]: Leaving directory '/<>/src/filmbabe' make[5]: Entering directory '/<>/src/filmbabe' make[5]: Leaving directory '/<>/src/filmbabe' make[4]: Leaving directory '/<>/src/filmbabe' make[3]: Leaving directory '/<>/src/filmbabe' make[2]: Leaving directory '/<>/src/filmbabe' make[1]: Leaving directory '/<>/src/filmbabe' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/flirt make[1]: Entering directory '/<>/src/flirt' /bin/cp -rf flirtsch/* /<>/debian/tmp/etc/flirtsch/. make[1]: Leaving directory '/<>/src/flirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/flirt install make[1]: Entering directory '/<>/src/flirt' make[2]: Entering directory '/<>/src/flirt' make[3]: Entering directory '/<>/src/flirt' /bin/cp -rf flirtsch/* /<>/debian/tmp/etc/flirtsch/. make[3]: Leaving directory '/<>/src/flirt' make[3]: Entering directory '/<>/src/flirt' make[4]: Entering directory '/<>/src/flirt' Installing stable binaries install -p -m 0775 flirt /<>/debian/tmp/bin/ install -p -m 0775 convert_xfm /<>/debian/tmp/bin/ install -p -m 0775 avscale /<>/debian/tmp/bin/ install -p -m 0775 rmsdiff /<>/debian/tmp/bin/ install -p -m 0775 std2imgcoord /<>/debian/tmp/bin/ install -p -m 0775 img2stdcoord /<>/debian/tmp/bin/ install -p -m 0775 img2imgcoord /<>/debian/tmp/bin/ install -p -m 0775 applyxfm4D /<>/debian/tmp/bin/ install -p -m 0775 pointflirt /<>/debian/tmp/bin/ install -p -m 0775 makerot /<>/debian/tmp/bin/ install -p -m 0775 midtrans /<>/debian/tmp/bin/ install -p -m 0775 extracttxt /<>/debian/tmp/bin/ install -p -m 0775 pairreg /<>/debian/tmp/bin/ install -p -m 0775 standard_space_roi /<>/debian/tmp/bin/ install -p -m 0775 flirt_average /<>/debian/tmp/bin/ install -p -m 0775 epi_reg /<>/debian/tmp/bin/ install -p -m 0775 aff2rigid /<>/debian/tmp/bin/ ln -s Runtcl Flirt ln -s Runtcl InvertXFM ln -s Runtcl ApplyXFM ln -s Runtcl ConcatXFM ln -s Runtcl Nudge make[4]: Leaving directory '/<>/src/flirt' make[4]: Entering directory '/<>/src/flirt' make[5]: Entering directory '/<>/src/flirt' Installing stable header files make[5]: Leaving directory '/<>/src/flirt' make[5]: Entering directory '/<>/src/flirt' Installing stable library archives make[5]: Leaving directory '/<>/src/flirt' make[5]: Entering directory '/<>/src/flirt' Installing tcl scripts install -p -m 0775 applyxfm.tcl /<>/debian/tmp/tcl/ install -p -m 0775 concatxfm.tcl /<>/debian/tmp/tcl/ install -p -m 0775 flirt.tcl /<>/debian/tmp/tcl/ install -p -m 0775 flirt_proc.tcl /<>/debian/tmp/tcl/ install -p -m 0775 invertxfm.tcl /<>/debian/tmp/tcl/ install -p -m 0775 nudge.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/flirt' make[5]: Entering directory '/<>/src/flirt' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/flirt/ make[5]: Leaving directory '/<>/src/flirt' make[5]: Entering directory '/<>/src/flirt' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/flirt/ make[5]: Leaving directory '/<>/src/flirt' make[5]: Entering directory '/<>/src/flirt' make[5]: Leaving directory '/<>/src/flirt' make[4]: Leaving directory '/<>/src/flirt' make[3]: Leaving directory '/<>/src/flirt' make[2]: Leaving directory '/<>/src/flirt' make[1]: Leaving directory '/<>/src/flirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fabber make[1]: Entering directory '/<>/src/fabber' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/fabber' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fabber install make[1]: Entering directory '/<>/src/fabber' make[2]: Entering directory '/<>/src/fabber' make[3]: Entering directory '/<>/src/fabber' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/fabber' make[3]: Entering directory '/<>/src/fabber' make[4]: Entering directory '/<>/src/fabber' Installing stable binaries install -p -m 0775 fabber /<>/debian/tmp/bin/ install -p -m 0775 mvntool /<>/debian/tmp/bin/ install -p -m 0775 fabber_var /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/fabber' make[4]: Entering directory '/<>/src/fabber' make[5]: Entering directory '/<>/src/fabber' Installing stable header files install -p -m 0664 asl_models.h /<>/include/fabber/ install -p -m 0664 convergence.h /<>/include/fabber/ install -p -m 0664 dataset.h /<>/include/fabber/ install -p -m 0664 dist_gamma.h /<>/include/fabber/ install -p -m 0664 dist_mvn.h /<>/include/fabber/ install -p -m 0664 easylog.h /<>/include/fabber/ install -p -m 0664 easyoptions.h /<>/include/fabber/ install -p -m 0664 fwdmodel.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_buxton.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_devel.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_dynangio.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_grase.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_pvc.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_quasar.h /<>/include/fabber/ install -p -m 0664 fwdmodel_asl_satrecov.h /<>/include/fabber/ install -p -m 0664 fwdmodel_cest.h /<>/include/fabber/ install -p -m 0664 fwdmodel_cest_devel.h /<>/include/fabber/ install -p -m 0664 fwdmodel_custom.h /<>/include/fabber/ install -p -m 0664 fwdmodel_dsc.h /<>/include/fabber/ install -p -m 0664 fwdmodel_fasl.h /<>/include/fabber/ install -p -m 0664 fwdmodel_flex.h /<>/include/fabber/ install -p -m 0664 fwdmodel_flobs.h /<>/include/fabber/ install -p -m 0664 fwdmodel_linear.h /<>/include/fabber/ install -p -m 0664 fwdmodel_pcASL.h /<>/include/fabber/ install -p -m 0664 fwdmodel_q2tips.h /<>/include/fabber/ install -p -m 0664 fwdmodel_quipss2.h /<>/include/fabber/ install -p -m 0664 fwdmodel_simple.h /<>/include/fabber/ install -p -m 0664 inference.h /<>/include/fabber/ install -p -m 0664 inference_nlls.h /<>/include/fabber/ install -p -m 0664 inference_spatialvb.h /<>/include/fabber/ install -p -m 0664 inference_vb.h /<>/include/fabber/ install -p -m 0664 noisemodel.h /<>/include/fabber/ install -p -m 0664 noisemodel_ar.h /<>/include/fabber/ install -p -m 0664 noisemodel_white.h /<>/include/fabber/ install -p -m 0664 tools.h /<>/include/fabber/ make[5]: Leaving directory '/<>/src/fabber' make[5]: Entering directory '/<>/src/fabber' Installing stable library archives make[5]: Leaving directory '/<>/src/fabber' make[5]: Entering directory '/<>/src/fabber' Installing tcl scripts make[5]: Leaving directory '/<>/src/fabber' make[5]: Entering directory '/<>/src/fabber' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fabber/ make[5]: Leaving directory '/<>/src/fabber' make[5]: Entering directory '/<>/src/fabber' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fabber/ make[5]: Leaving directory '/<>/src/fabber' make[5]: Entering directory '/<>/src/fabber' make[5]: Leaving directory '/<>/src/fabber' make[4]: Leaving directory '/<>/src/fabber' make[3]: Leaving directory '/<>/src/fabber' make[2]: Leaving directory '/<>/src/fabber' make[1]: Leaving directory '/<>/src/fabber' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/baycest make[1]: Entering directory '/<>/src/baycest' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/baycest' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/baycest install make[1]: Entering directory '/<>/src/baycest' make[2]: Entering directory '/<>/src/baycest' make[3]: Entering directory '/<>/src/baycest' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/baycest' make[3]: Entering directory '/<>/src/baycest' make[4]: Entering directory '/<>/src/baycest' Installing stable binaries install -p -m 0775 baycest /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/baycest' make[4]: Entering directory '/<>/src/baycest' make[5]: Entering directory '/<>/src/baycest' Installing stable header files make[5]: Leaving directory '/<>/src/baycest' make[5]: Entering directory '/<>/src/baycest' Installing stable library archives make[5]: Leaving directory '/<>/src/baycest' make[5]: Entering directory '/<>/src/baycest' Installing tcl scripts make[5]: Leaving directory '/<>/src/baycest' make[5]: Entering directory '/<>/src/baycest' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/baycest/ make[5]: Leaving directory '/<>/src/baycest' make[5]: Entering directory '/<>/src/baycest' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/baycest/ make[5]: Leaving directory '/<>/src/baycest' make[5]: Entering directory '/<>/src/baycest' make[5]: Leaving directory '/<>/src/baycest' make[4]: Leaving directory '/<>/src/baycest' make[3]: Leaving directory '/<>/src/baycest' make[2]: Leaving directory '/<>/src/baycest' make[1]: Leaving directory '/<>/src/baycest' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslvbm make[1]: Entering directory '/<>/src/fslvbm' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/fslvbm' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fslvbm install make[1]: Entering directory '/<>/src/fslvbm' make[2]: Entering directory '/<>/src/fslvbm' make[3]: Entering directory '/<>/src/fslvbm' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/fslvbm' make[3]: Entering directory '/<>/src/fslvbm' make[4]: Entering directory '/<>/src/fslvbm' Installing stable binaries install -p -m 0775 fslvbm_1_bet /<>/debian/tmp/bin/ install -p -m 0775 fslvbm_2_template /<>/debian/tmp/bin/ install -p -m 0775 fslvbm_3_proc /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/fslvbm' make[4]: Entering directory '/<>/src/fslvbm' make[5]: Entering directory '/<>/src/fslvbm' Installing stable header files make[5]: Leaving directory '/<>/src/fslvbm' make[5]: Entering directory '/<>/src/fslvbm' Installing stable library archives make[5]: Leaving directory '/<>/src/fslvbm' make[5]: Entering directory '/<>/src/fslvbm' Installing tcl scripts make[5]: Leaving directory '/<>/src/fslvbm' make[5]: Entering directory '/<>/src/fslvbm' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fslvbm/ make[5]: Leaving directory '/<>/src/fslvbm' make[5]: Entering directory '/<>/src/fslvbm' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fslvbm/ make[5]: Leaving directory '/<>/src/fslvbm' make[5]: Entering directory '/<>/src/fslvbm' make[5]: Leaving directory '/<>/src/fslvbm' make[4]: Leaving directory '/<>/src/fslvbm' make[3]: Leaving directory '/<>/src/fslvbm' make[2]: Leaving directory '/<>/src/fslvbm' make[1]: Leaving directory '/<>/src/fslvbm' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/mcflirt make[1]: Entering directory '/<>/src/mcflirt' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/mcflirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/mcflirt install make[1]: Entering directory '/<>/src/mcflirt' make[2]: Entering directory '/<>/src/mcflirt' make[3]: Entering directory '/<>/src/mcflirt' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/mcflirt' make[3]: Entering directory '/<>/src/mcflirt' make[4]: Entering directory '/<>/src/mcflirt' Installing stable binaries install -p -m 0775 mcflirt /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/mcflirt' make[4]: Entering directory '/<>/src/mcflirt' make[5]: Entering directory '/<>/src/mcflirt' Installing stable header files install -p -m 0664 Globaloptions.h /<>/include/mcflirt/ install -p -m 0664 Log.h /<>/include/mcflirt/ make[5]: Leaving directory '/<>/src/mcflirt' make[5]: Entering directory '/<>/src/mcflirt' Installing stable library archives make[5]: Leaving directory '/<>/src/mcflirt' make[5]: Entering directory '/<>/src/mcflirt' Installing tcl scripts make[5]: Leaving directory '/<>/src/mcflirt' make[5]: Entering directory '/<>/src/mcflirt' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/mcflirt/ make[5]: Leaving directory '/<>/src/mcflirt' make[5]: Entering directory '/<>/src/mcflirt' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/mcflirt/ make[5]: Leaving directory '/<>/src/mcflirt' make[5]: Entering directory '/<>/src/mcflirt' make[5]: Leaving directory '/<>/src/mcflirt' make[4]: Leaving directory '/<>/src/mcflirt' make[3]: Leaving directory '/<>/src/mcflirt' make[2]: Leaving directory '/<>/src/mcflirt' make[1]: Leaving directory '/<>/src/mcflirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/melodic make[1]: Entering directory '/<>/src/melodic' g++ -shared -o libggmix.so ggmix.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lnewmat -lmiscmaths -lnewimage make[1]: Leaving directory '/<>/src/melodic' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/melodic install make[1]: Entering directory '/<>/src/melodic' make[2]: Entering directory '/<>/src/melodic' make[3]: Entering directory '/<>/src/melodic' g++ -shared -o libggmix.so ggmix.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lnewmat -lmiscmaths -lnewimage make[3]: Leaving directory '/<>/src/melodic' make[3]: Entering directory '/<>/src/melodic' make[4]: Entering directory '/<>/src/melodic' Installing stable binaries install -p -m 0775 fsl_glm /<>/debian/tmp/bin/ install -p -m 0775 fsl_sbca /<>/debian/tmp/bin/ install -p -m 0775 fsl_mvlm /<>/debian/tmp/bin/ install -p -m 0775 fsl_regfilt /<>/debian/tmp/bin/ install -p -m 0775 fsl_schurprod /<>/debian/tmp/bin/ install -p -m 0775 melodic /<>/debian/tmp/bin/ install -p -m 0775 fsl_sbca /<>/debian/tmp/bin/ install -p -m 0775 fsl_mvlm /<>/debian/tmp/bin/ install -p -m 0775 fsl_schurprod /<>/debian/tmp/bin/ install -p -m 0775 dual_regression /<>/debian/tmp/bin/ ln -s Runtcl Melodic make[4]: Leaving directory '/<>/src/melodic' make[4]: Entering directory '/<>/src/melodic' make[5]: Entering directory '/<>/src/melodic' Installing stable header files install -p -m 0664 ggmix.h /<>/include/melodic/ install -p -m 0664 meldata.h /<>/include/melodic/ install -p -m 0664 melgmix.h /<>/include/melodic/ install -p -m 0664 melhlprfns.h /<>/include/melodic/ install -p -m 0664 melica.h /<>/include/melodic/ install -p -m 0664 melodic.h /<>/include/melodic/ install -p -m 0664 meloptions.h /<>/include/melodic/ install -p -m 0664 melpca.h /<>/include/melodic/ install -p -m 0664 melreport.h /<>/include/melodic/ make[5]: Leaving directory '/<>/src/melodic' make[5]: Entering directory '/<>/src/melodic' Installing stable library archives install -p -m 0664 libggmix.so /<>/lib make[5]: Leaving directory '/<>/src/melodic' make[5]: Entering directory '/<>/src/melodic' Installing tcl scripts install -p -m 0775 melodic.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/melodic' make[5]: Entering directory '/<>/src/melodic' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/melodic/ make[5]: Leaving directory '/<>/src/melodic' make[5]: Entering directory '/<>/src/melodic' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/melodic/ make[5]: Leaving directory '/<>/src/melodic' make[5]: Entering directory '/<>/src/melodic' make[5]: Leaving directory '/<>/src/melodic' make[4]: Leaving directory '/<>/src/melodic' make[3]: Leaving directory '/<>/src/melodic' make[2]: Leaving directory '/<>/src/melodic' make[1]: Leaving directory '/<>/src/melodic' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_c make[1]: Entering directory '/<>/src/misc_c' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/misc_c' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_c install make[1]: Entering directory '/<>/src/misc_c' make[2]: Entering directory '/<>/src/misc_c' make[3]: Entering directory '/<>/src/misc_c' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/misc_c' make[3]: Entering directory '/<>/src/misc_c' make[4]: Entering directory '/<>/src/misc_c' Installing stable binaries install -p -m 0775 whirlgif /<>/debian/tmp/bin/ install -p -m 0775 hist2prob /<>/debian/tmp/bin/ install -p -m 0775 morph_kernel /<>/debian/tmp/bin/ install -p -m 0775 ptoz /<>/debian/tmp/bin/ install -p -m 0775 tmpnam /<>/debian/tmp/bin/ install -p -m 0775 ztop /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/misc_c' make[4]: Entering directory '/<>/src/misc_c' make[5]: Entering directory '/<>/src/misc_c' Installing stable header files install -p -m 0664 whirlgif.h /<>/include/misc_c/ make[5]: Leaving directory '/<>/src/misc_c' make[5]: Entering directory '/<>/src/misc_c' Installing stable library archives make[5]: Leaving directory '/<>/src/misc_c' make[5]: Entering directory '/<>/src/misc_c' Installing tcl scripts make[5]: Leaving directory '/<>/src/misc_c' make[5]: Entering directory '/<>/src/misc_c' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/misc_c/ make[5]: Leaving directory '/<>/src/misc_c' make[5]: Entering directory '/<>/src/misc_c' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/misc_c/ make[5]: Leaving directory '/<>/src/misc_c' make[5]: Entering directory '/<>/src/misc_c' make[5]: Leaving directory '/<>/src/misc_c' make[4]: Leaving directory '/<>/src/misc_c' make[3]: Leaving directory '/<>/src/misc_c' make[2]: Leaving directory '/<>/src/misc_c' make[1]: Leaving directory '/<>/src/misc_c' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/miscvis make[1]: Entering directory '/<>/src/miscvis' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/miscvis' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/miscvis install make[1]: Entering directory '/<>/src/miscvis' make[2]: Entering directory '/<>/src/miscvis' make[3]: Entering directory '/<>/src/miscvis' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/miscvis' make[3]: Entering directory '/<>/src/miscvis' make[4]: Entering directory '/<>/src/miscvis' Installing stable binaries install -p -m 0775 slicer /<>/debian/tmp/bin/ install -p -m 0775 overlay /<>/debian/tmp/bin/ install -p -m 0775 fsl_tsplot /<>/debian/tmp/bin/ install -p -m 0775 fsl_boxplot /<>/debian/tmp/bin/ install -p -m 0775 fsl_histogram /<>/debian/tmp/bin/ install -p -m 0775 create_lut /<>/debian/tmp/bin/ install -p -m 0775 wpng /<>/debian/tmp/bin/ install -p -m 0775 pngappend /<>/debian/tmp/bin/ install -p -m 0775 slices /<>/debian/tmp/bin/ install -p -m 0775 slicesdir /<>/debian/tmp/bin/ install -p -m 0775 slicesmask /<>/debian/tmp/bin/ install -p -m 0775 slices_summary /<>/debian/tmp/bin/ ln -s Runtcl Renderstats make[4]: Leaving directory '/<>/src/miscvis' make[4]: Entering directory '/<>/src/miscvis' make[5]: Entering directory '/<>/src/miscvis' Installing stable header files install -p -m 0664 readpng.h /<>/include/miscvis/ install -p -m 0664 writepng.h /<>/include/miscvis/ make[5]: Leaving directory '/<>/src/miscvis' make[5]: Entering directory '/<>/src/miscvis' Installing stable library archives make[5]: Leaving directory '/<>/src/miscvis' make[5]: Entering directory '/<>/src/miscvis' Installing tcl scripts install -p -m 0775 display.tcl /<>/debian/tmp/tcl/ install -p -m 0775 ppm2gif.tcl /<>/debian/tmp/tcl/ install -p -m 0775 renderstats.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/miscvis' make[5]: Entering directory '/<>/src/miscvis' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/miscvis/ make[5]: Leaving directory '/<>/src/miscvis' make[5]: Entering directory '/<>/src/miscvis' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/miscvis/ make[5]: Leaving directory '/<>/src/miscvis' make[5]: Entering directory '/<>/src/miscvis' make[5]: Leaving directory '/<>/src/miscvis' make[4]: Leaving directory '/<>/src/miscvis' make[3]: Leaving directory '/<>/src/miscvis' make[2]: Leaving directory '/<>/src/miscvis' make[1]: Leaving directory '/<>/src/miscvis' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/mm make[1]: Entering directory '/<>/src/mm' g++ -shared -o libmm.so mmoptions.o mixture_model.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lmiscpic -lnewmat -lnewimage -lmiscmaths -lfslio -lutils -lprob -lmiscplot -lgd make[1]: Leaving directory '/<>/src/mm' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/mm install make[1]: Entering directory '/<>/src/mm' make[2]: Entering directory '/<>/src/mm' make[3]: Entering directory '/<>/src/mm' g++ -shared -o libmm.so mmoptions.o mixture_model.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib -L -L/usr/lib -L/<>/extras/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L. -L/<>/lib -L/<>/lib -fPIC -lmiscpic -lnewmat -lnewimage -lmiscmaths -lfslio -lutils -lprob -lmiscplot -lgd make[3]: Leaving directory '/<>/src/mm' make[3]: Entering directory '/<>/src/mm' make[4]: Entering directory '/<>/src/mm' Installing stable binaries install -p -m 0775 mm /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/mm' make[4]: Entering directory '/<>/src/mm' make[5]: Entering directory '/<>/src/mm' Installing stable header files install -p -m 0664 connected_offset.h /<>/include/mm/ install -p -m 0664 mixture_model.h /<>/include/mm/ install -p -m 0664 mmoptions.h /<>/include/mm/ make[5]: Leaving directory '/<>/src/mm' make[5]: Entering directory '/<>/src/mm' Installing stable library archives install -p -m 0664 libmm.so /<>/lib make[5]: Leaving directory '/<>/src/mm' make[5]: Entering directory '/<>/src/mm' Installing tcl scripts make[5]: Leaving directory '/<>/src/mm' make[5]: Entering directory '/<>/src/mm' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/mm/ make[5]: Leaving directory '/<>/src/mm' make[5]: Entering directory '/<>/src/mm' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/mm/ make[5]: Leaving directory '/<>/src/mm' make[5]: Entering directory '/<>/src/mm' make[5]: Leaving directory '/<>/src/mm' make[4]: Leaving directory '/<>/src/mm' make[3]: Leaving directory '/<>/src/mm' make[2]: Leaving directory '/<>/src/mm' make[1]: Leaving directory '/<>/src/mm' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/gps make[1]: Entering directory '/<>/src/gps' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/gps' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/gps install make[1]: Entering directory '/<>/src/gps' make[2]: Entering directory '/<>/src/gps' make[3]: Entering directory '/<>/src/gps' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/gps' make[3]: Entering directory '/<>/src/gps' make[4]: Entering directory '/<>/src/gps' Installing stable binaries install -p -m 0775 gps /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/gps' make[4]: Entering directory '/<>/src/gps' make[5]: Entering directory '/<>/src/gps' Installing stable header files install -p -m 0664 gps.h /<>/include/gps/ make[5]: Leaving directory '/<>/src/gps' make[5]: Entering directory '/<>/src/gps' Installing stable library archives make[5]: Leaving directory '/<>/src/gps' make[5]: Entering directory '/<>/src/gps' Installing tcl scripts make[5]: Leaving directory '/<>/src/gps' make[5]: Entering directory '/<>/src/gps' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/gps/ make[5]: Leaving directory '/<>/src/gps' make[5]: Entering directory '/<>/src/gps' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/gps/ make[5]: Leaving directory '/<>/src/gps' make[5]: Entering directory '/<>/src/gps' make[5]: Leaving directory '/<>/src/gps' make[4]: Leaving directory '/<>/src/gps' make[3]: Leaving directory '/<>/src/gps' make[2]: Leaving directory '/<>/src/gps' make[1]: Leaving directory '/<>/src/gps' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/randomise make[1]: Entering directory '/<>/src/randomise' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/randomise' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/randomise install make[1]: Entering directory '/<>/src/randomise' make[2]: Entering directory '/<>/src/randomise' make[3]: Entering directory '/<>/src/randomise' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/randomise' make[3]: Entering directory '/<>/src/randomise' make[4]: Entering directory '/<>/src/randomise' Installing stable binaries install -p -m 0775 randomise /<>/debian/tmp/bin/ install -p -m 0775 fdr /<>/debian/tmp/bin/ install -p -m 0775 unconfound /<>/debian/tmp/bin/ install -p -m 0775 design_ttest2 /<>/debian/tmp/bin/ install -p -m 0775 randomise_parallel /<>/debian/tmp/bin/ install -p -m 0775 setup_masks /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/randomise' make[4]: Entering directory '/<>/src/randomise' make[5]: Entering directory '/<>/src/randomise' Installing stable header files install -p -m 0664 ranopts.h /<>/include/randomise/ make[5]: Leaving directory '/<>/src/randomise' make[5]: Entering directory '/<>/src/randomise' Installing stable library archives make[5]: Leaving directory '/<>/src/randomise' make[5]: Entering directory '/<>/src/randomise' Installing tcl scripts make[5]: Leaving directory '/<>/src/randomise' make[5]: Entering directory '/<>/src/randomise' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/randomise/ make[5]: Leaving directory '/<>/src/randomise' make[5]: Entering directory '/<>/src/randomise' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/randomise/ make[5]: Leaving directory '/<>/src/randomise' make[5]: Entering directory '/<>/src/randomise' make[5]: Leaving directory '/<>/src/randomise' make[4]: Leaving directory '/<>/src/randomise' make[3]: Leaving directory '/<>/src/randomise' make[2]: Leaving directory '/<>/src/randomise' make[1]: Leaving directory '/<>/src/randomise' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/siena make[1]: Entering directory '/<>/src/siena' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/siena' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/siena install make[1]: Entering directory '/<>/src/siena' make[2]: Entering directory '/<>/src/siena' make[3]: Entering directory '/<>/src/siena' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/siena' make[3]: Entering directory '/<>/src/siena' make[4]: Entering directory '/<>/src/siena' Installing stable binaries install -p -m 0775 siena_diff /<>/debian/tmp/bin/ install -p -m 0775 siena /<>/debian/tmp/bin/ install -p -m 0775 siena_flirt /<>/debian/tmp/bin/ install -p -m 0775 siena_cal /<>/debian/tmp/bin/ install -p -m 0775 sienax /<>/debian/tmp/bin/ install -p -m 0775 siena_flow2std /<>/debian/tmp/bin/ install -p -m 0775 viena_quant /<>/debian/tmp/bin/ install -p -m 0775 viena_createpng /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/siena' make[4]: Entering directory '/<>/src/siena' make[5]: Entering directory '/<>/src/siena' Installing stable header files make[5]: Leaving directory '/<>/src/siena' make[5]: Entering directory '/<>/src/siena' Installing stable library archives make[5]: Leaving directory '/<>/src/siena' make[5]: Entering directory '/<>/src/siena' Installing tcl scripts make[5]: Leaving directory '/<>/src/siena' make[5]: Entering directory '/<>/src/siena' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/siena/ make[5]: Leaving directory '/<>/src/siena' make[5]: Entering directory '/<>/src/siena' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/siena/ make[5]: Leaving directory '/<>/src/siena' make[5]: Entering directory '/<>/src/siena' make[5]: Leaving directory '/<>/src/siena' make[4]: Leaving directory '/<>/src/siena' make[3]: Leaving directory '/<>/src/siena' make[2]: Leaving directory '/<>/src/siena' make[1]: Leaving directory '/<>/src/siena' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/slicetimer make[1]: Entering directory '/<>/src/slicetimer' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/slicetimer' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/slicetimer install make[1]: Entering directory '/<>/src/slicetimer' make[2]: Entering directory '/<>/src/slicetimer' make[3]: Entering directory '/<>/src/slicetimer' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/slicetimer' make[3]: Entering directory '/<>/src/slicetimer' make[4]: Entering directory '/<>/src/slicetimer' Installing stable binaries install -p -m 0775 slicetimer /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/slicetimer' make[4]: Entering directory '/<>/src/slicetimer' make[5]: Entering directory '/<>/src/slicetimer' Installing stable header files make[5]: Leaving directory '/<>/src/slicetimer' make[5]: Entering directory '/<>/src/slicetimer' Installing stable library archives make[5]: Leaving directory '/<>/src/slicetimer' make[5]: Entering directory '/<>/src/slicetimer' Installing tcl scripts make[5]: Leaving directory '/<>/src/slicetimer' make[5]: Entering directory '/<>/src/slicetimer' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/slicetimer/ make[5]: Leaving directory '/<>/src/slicetimer' make[5]: Entering directory '/<>/src/slicetimer' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/slicetimer/ make[5]: Leaving directory '/<>/src/slicetimer' make[5]: Entering directory '/<>/src/slicetimer' make[5]: Leaving directory '/<>/src/slicetimer' make[4]: Leaving directory '/<>/src/slicetimer' make[3]: Leaving directory '/<>/src/slicetimer' make[2]: Leaving directory '/<>/src/slicetimer' make[1]: Leaving directory '/<>/src/slicetimer' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/susan make[1]: Entering directory '/<>/src/susan' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/susan' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/susan install make[1]: Entering directory '/<>/src/susan' make[2]: Entering directory '/<>/src/susan' make[3]: Entering directory '/<>/src/susan' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/susan' make[3]: Entering directory '/<>/src/susan' make[4]: Entering directory '/<>/src/susan' Installing stable binaries install -p -m 0775 susan /<>/debian/tmp/bin/ ln -s Runtcl Susan make[4]: Leaving directory '/<>/src/susan' make[4]: Entering directory '/<>/src/susan' make[5]: Entering directory '/<>/src/susan' Installing stable header files make[5]: Leaving directory '/<>/src/susan' make[5]: Entering directory '/<>/src/susan' Installing stable library archives make[5]: Leaving directory '/<>/src/susan' make[5]: Entering directory '/<>/src/susan' Installing tcl scripts install -p -m 0775 susan.tcl /<>/debian/tmp/tcl/ install -p -m 0775 susan_proc.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/susan' make[5]: Entering directory '/<>/src/susan' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/susan/ make[5]: Leaving directory '/<>/src/susan' make[5]: Entering directory '/<>/src/susan' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/susan/ make[5]: Leaving directory '/<>/src/susan' make[5]: Entering directory '/<>/src/susan' make[5]: Leaving directory '/<>/src/susan' make[4]: Leaving directory '/<>/src/susan' make[3]: Leaving directory '/<>/src/susan' make[2]: Leaving directory '/<>/src/susan' make[1]: Leaving directory '/<>/src/susan' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/tbss make[1]: Entering directory '/<>/src/tbss' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/tbss' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/tbss install make[1]: Entering directory '/<>/src/tbss' make[2]: Entering directory '/<>/src/tbss' make[3]: Entering directory '/<>/src/tbss' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/tbss' make[3]: Entering directory '/<>/src/tbss' make[4]: Entering directory '/<>/src/tbss' Installing stable binaries install -p -m 0775 distancemap /<>/debian/tmp/bin/ install -p -m 0775 tbss_skeleton /<>/debian/tmp/bin/ install -p -m 0775 swap_voxelwise /<>/debian/tmp/bin/ install -p -m 0775 swap_subjectwise /<>/debian/tmp/bin/ install -p -m 0775 tbss_1_preproc /<>/debian/tmp/bin/ install -p -m 0775 tbss_2_reg /<>/debian/tmp/bin/ install -p -m 0775 tbss_3_postreg /<>/debian/tmp/bin/ install -p -m 0775 tbss_4_prestats /<>/debian/tmp/bin/ install -p -m 0775 fsl_reg /<>/debian/tmp/bin/ install -p -m 0775 tbss_non_FA /<>/debian/tmp/bin/ install -p -m 0775 tbss_fill /<>/debian/tmp/bin/ install -p -m 0775 tbss_deproject /<>/debian/tmp/bin/ install -p -m 0775 tbss_sym /<>/debian/tmp/bin/ install -p -m 0775 tbss_x /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/tbss' make[4]: Entering directory '/<>/src/tbss' make[5]: Entering directory '/<>/src/tbss' Installing stable header files make[5]: Leaving directory '/<>/src/tbss' make[5]: Entering directory '/<>/src/tbss' Installing stable library archives make[5]: Leaving directory '/<>/src/tbss' make[5]: Entering directory '/<>/src/tbss' Installing tcl scripts make[5]: Leaving directory '/<>/src/tbss' make[5]: Entering directory '/<>/src/tbss' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/tbss/ make[5]: Leaving directory '/<>/src/tbss' make[5]: Entering directory '/<>/src/tbss' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/tbss/ make[5]: Leaving directory '/<>/src/tbss' make[5]: Entering directory '/<>/src/tbss' make[5]: Leaving directory '/<>/src/tbss' make[4]: Leaving directory '/<>/src/tbss' make[3]: Leaving directory '/<>/src/tbss' make[2]: Leaving directory '/<>/src/tbss' make[1]: Leaving directory '/<>/src/tbss' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fnirt make[1]: Entering directory '/<>/src/fnirt' /bin/cp -rf fnirtcnf/* /<>/debian/tmp/etc/flirtsch/. make[1]: Leaving directory '/<>/src/fnirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fnirt install make[1]: Entering directory '/<>/src/fnirt' make[2]: Entering directory '/<>/src/fnirt' make[3]: Entering directory '/<>/src/fnirt' /bin/cp -rf fnirtcnf/* /<>/debian/tmp/etc/flirtsch/. make[3]: Leaving directory '/<>/src/fnirt' make[3]: Entering directory '/<>/src/fnirt' make[4]: Entering directory '/<>/src/fnirt' Installing stable binaries install -p -m 0775 fnirt /<>/debian/tmp/bin/ install -p -m 0775 new_invwarp /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/fnirt' make[4]: Entering directory '/<>/src/fnirt' make[5]: Entering directory '/<>/src/fnirt' Installing stable header files install -p -m 0664 dilator.h /<>/include/fnirt/ install -p -m 0664 fnirt_costfunctions.h /<>/include/fnirt/ install -p -m 0664 fnirtfns.h /<>/include/fnirt/ install -p -m 0664 intensity_mappers.h /<>/include/fnirt/ install -p -m 0664 matching_points.h /<>/include/fnirt/ install -p -m 0664 phase.h /<>/include/fnirt/ install -p -m 0664 tetrahedron.h /<>/include/fnirt/ make[5]: Leaving directory '/<>/src/fnirt' make[5]: Entering directory '/<>/src/fnirt' Installing stable library archives make[5]: Leaving directory '/<>/src/fnirt' make[5]: Entering directory '/<>/src/fnirt' Installing tcl scripts make[5]: Leaving directory '/<>/src/fnirt' make[5]: Entering directory '/<>/src/fnirt' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fnirt/ make[5]: Leaving directory '/<>/src/fnirt' make[5]: Entering directory '/<>/src/fnirt' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fnirt/ make[5]: Leaving directory '/<>/src/fnirt' make[5]: Entering directory '/<>/src/fnirt' make[5]: Leaving directory '/<>/src/fnirt' make[4]: Leaving directory '/<>/src/fnirt' make[3]: Leaving directory '/<>/src/fnirt' make[2]: Leaving directory '/<>/src/fnirt' make[1]: Leaving directory '/<>/src/fnirt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fugue make[1]: Entering directory '/<>/src/fugue' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/fugue' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fugue install make[1]: Entering directory '/<>/src/fugue' make[2]: Entering directory '/<>/src/fugue' make[3]: Entering directory '/<>/src/fugue' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/fugue' make[3]: Entering directory '/<>/src/fugue' make[4]: Entering directory '/<>/src/fugue' Installing stable binaries install -p -m 0775 prelude /<>/debian/tmp/bin/ install -p -m 0775 fugue /<>/debian/tmp/bin/ install -p -m 0775 applywarp /<>/debian/tmp/bin/ install -p -m 0775 convertwarp /<>/debian/tmp/bin/ install -p -m 0775 sigloss /<>/debian/tmp/bin/ install -p -m 0775 invwarp_exe /<>/debian/tmp/bin/ install -p -m 0775 fnirtfileutils /<>/debian/tmp/bin/ install -p -m 0775 fsl_prepare_fieldmap /<>/debian/tmp/bin/ install -p -m 0775 extractfidparams /<>/debian/tmp/bin/ install -p -m 0775 invwarp /<>/debian/tmp/bin/ ln -s Runtcl Fsl_prepare_fieldmap make[4]: Leaving directory '/<>/src/fugue' make[4]: Entering directory '/<>/src/fugue' make[5]: Entering directory '/<>/src/fugue' Installing stable header files install -p -m 0664 unwarpfns.h /<>/include/fugue/ make[5]: Leaving directory '/<>/src/fugue' make[5]: Entering directory '/<>/src/fugue' Installing stable library archives make[5]: Leaving directory '/<>/src/fugue' make[5]: Entering directory '/<>/src/fugue' Installing tcl scripts install -p -m 0775 fsl_prepare_fieldmap.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/fugue' make[5]: Entering directory '/<>/src/fugue' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fugue/ make[5]: Leaving directory '/<>/src/fugue' make[5]: Entering directory '/<>/src/fugue' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fugue/ make[5]: Leaving directory '/<>/src/fugue' make[5]: Entering directory '/<>/src/fugue' make[5]: Leaving directory '/<>/src/fugue' make[4]: Leaving directory '/<>/src/fugue' make[3]: Leaving directory '/<>/src/fugue' make[2]: Leaving directory '/<>/src/fugue' make[1]: Leaving directory '/<>/src/fugue' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/asl_mfree make[1]: Entering directory '/<>/src/asl_mfree' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/asl_mfree' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/asl_mfree install make[1]: Entering directory '/<>/src/asl_mfree' make[2]: Entering directory '/<>/src/asl_mfree' make[3]: Entering directory '/<>/src/asl_mfree' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/asl_mfree' make[3]: Entering directory '/<>/src/asl_mfree' make[4]: Entering directory '/<>/src/asl_mfree' Installing stable binaries install -p -m 0775 asl_mfree /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/asl_mfree' make[4]: Entering directory '/<>/src/asl_mfree' make[5]: Entering directory '/<>/src/asl_mfree' Installing stable header files install -p -m 0664 asl_mfree_functions.h /<>/include/asl_mfree/ install -p -m 0664 readoptions.h /<>/include/asl_mfree/ make[5]: Leaving directory '/<>/src/asl_mfree' make[5]: Entering directory '/<>/src/asl_mfree' Installing stable library archives make[5]: Leaving directory '/<>/src/asl_mfree' make[5]: Entering directory '/<>/src/asl_mfree' Installing tcl scripts make[5]: Leaving directory '/<>/src/asl_mfree' make[5]: Entering directory '/<>/src/asl_mfree' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/asl_mfree/ make[5]: Leaving directory '/<>/src/asl_mfree' make[5]: Entering directory '/<>/src/asl_mfree' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/asl_mfree/ make[5]: Leaving directory '/<>/src/asl_mfree' make[5]: Entering directory '/<>/src/asl_mfree' make[5]: Leaving directory '/<>/src/asl_mfree' make[4]: Leaving directory '/<>/src/asl_mfree' make[3]: Leaving directory '/<>/src/asl_mfree' make[2]: Leaving directory '/<>/src/asl_mfree' make[1]: Leaving directory '/<>/src/asl_mfree' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_scripts make[1]: Entering directory '/<>/src/misc_scripts' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/misc_scripts' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/misc_scripts install make[1]: Entering directory '/<>/src/misc_scripts' make[2]: Entering directory '/<>/src/misc_scripts' make[3]: Entering directory '/<>/src/misc_scripts' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/misc_scripts' make[3]: Entering directory '/<>/src/misc_scripts' make[4]: Entering directory '/<>/src/misc_scripts' Installing stable binaries install -p -m 0775 fslecho /<>/debian/tmp/bin/ install -p -m 0775 Text2Vest /<>/debian/tmp/bin/ install -p -m 0775 Vest2Text /<>/debian/tmp/bin/ install -p -m 0775 AnatomicalAverage /<>/debian/tmp/bin/ install -p -m 0775 fsl_abspath /<>/debian/tmp/bin/ install -p -m 0775 fsl_anat /<>/debian/tmp/bin/ install -p -m 0775 fslFixText /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/misc_scripts' make[4]: Entering directory '/<>/src/misc_scripts' make[5]: Entering directory '/<>/src/misc_scripts' Installing stable header files make[5]: Leaving directory '/<>/src/misc_scripts' make[5]: Entering directory '/<>/src/misc_scripts' Installing stable library archives make[5]: Leaving directory '/<>/src/misc_scripts' make[5]: Entering directory '/<>/src/misc_scripts' Installing tcl scripts make[5]: Leaving directory '/<>/src/misc_scripts' make[5]: Entering directory '/<>/src/misc_scripts' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/misc_scripts/ make[5]: Leaving directory '/<>/src/misc_scripts' make[5]: Entering directory '/<>/src/misc_scripts' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/misc_scripts/ make[5]: Leaving directory '/<>/src/misc_scripts' make[5]: Entering directory '/<>/src/misc_scripts' make[5]: Leaving directory '/<>/src/misc_scripts' make[4]: Leaving directory '/<>/src/misc_scripts' make[3]: Leaving directory '/<>/src/misc_scripts' make[2]: Leaving directory '/<>/src/misc_scripts' make[1]: Leaving directory '/<>/src/misc_scripts' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fdt make[1]: Entering directory '/<>/src/fdt' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/fdt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/fdt install make[1]: Entering directory '/<>/src/fdt' make[2]: Entering directory '/<>/src/fdt' make[3]: Entering directory '/<>/src/fdt' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/fdt' make[3]: Entering directory '/<>/src/fdt' make[4]: Entering directory '/<>/src/fdt' Installing stable binaries install -p -m 0775 dtifit /<>/debian/tmp/bin/ install -p -m 0775 ccops /<>/debian/tmp/bin/ install -p -m 0775 medianfilter /<>/debian/tmp/bin/ install -p -m 0775 make_dyadic_vectors /<>/debian/tmp/bin/ install -p -m 0775 vecreg /<>/debian/tmp/bin/ install -p -m 0775 xfibres /<>/debian/tmp/bin/ install -p -m 0775 probtrackx /<>/debian/tmp/bin/ install -p -m 0775 pvmfit /<>/debian/tmp/bin/ install -p -m 0775 dtigen /<>/debian/tmp/bin/ install -p -m 0775 eddy_combine /<>/debian/tmp/bin/ install -p -m 0775 eddy_correct /<>/debian/tmp/bin/ install -p -m 0775 zeropad /<>/debian/tmp/bin/ install -p -m 0775 maskdyads /<>/debian/tmp/bin/ install -p -m 0775 probtrack /<>/debian/tmp/bin/ install -p -m 0775 fdt_rotate_bvecs /<>/debian/tmp/bin/ install -p -m 0775 bedpost /<>/debian/tmp/bin/ install -p -m 0775 bedpostx /<>/debian/tmp/bin/ install -p -m 0775 bedpostx_postproc.sh /<>/debian/tmp/bin/ install -p -m 0775 bedpostx_preproc.sh /<>/debian/tmp/bin/ install -p -m 0775 bedpostx_single_slice.sh /<>/debian/tmp/bin/ install -p -m 0775 bedpostx_datacheck /<>/debian/tmp/bin/ ln -s Runtcl Fdt make[4]: Leaving directory '/<>/src/fdt' make[4]: Entering directory '/<>/src/fdt' make[5]: Entering directory '/<>/src/fdt' Installing stable header files install -p -m 0664 Bingham_Watson_approx.h /<>/include/fdt/ install -p -m 0664 ccopsOptions.h /<>/include/fdt/ install -p -m 0664 commonopts.h /<>/include/fdt/ install -p -m 0664 diff_pvmoptions.h /<>/include/fdt/ install -p -m 0664 diffmodels.h /<>/include/fdt/ install -p -m 0664 dtifitOptions.h /<>/include/fdt/ install -p -m 0664 fibre.h /<>/include/fdt/ install -p -m 0664 particle.h /<>/include/fdt/ install -p -m 0664 probtrackx.h /<>/include/fdt/ install -p -m 0664 probtrackxOptions.h /<>/include/fdt/ install -p -m 0664 ptx_meshmask.h /<>/include/fdt/ install -p -m 0664 ptx_nmasks.h /<>/include/fdt/ install -p -m 0664 ptx_seedmask.h /<>/include/fdt/ install -p -m 0664 ptx_simple.h /<>/include/fdt/ install -p -m 0664 ptx_twomasks.h /<>/include/fdt/ install -p -m 0664 pvmfitOptions.h /<>/include/fdt/ install -p -m 0664 streamlines.h /<>/include/fdt/ install -p -m 0664 tractOptions.h /<>/include/fdt/ install -p -m 0664 tractOpts.h /<>/include/fdt/ install -p -m 0664 tractvols.h /<>/include/fdt/ install -p -m 0664 tractvolsx.h /<>/include/fdt/ install -p -m 0664 vecreg.h /<>/include/fdt/ install -p -m 0664 xfibresoptions.h /<>/include/fdt/ make[5]: Leaving directory '/<>/src/fdt' make[5]: Entering directory '/<>/src/fdt' Installing stable library archives make[5]: Leaving directory '/<>/src/fdt' make[5]: Entering directory '/<>/src/fdt' Installing tcl scripts install -p -m 0775 fdt.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/fdt' make[5]: Entering directory '/<>/src/fdt' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fdt/ make[5]: Leaving directory '/<>/src/fdt' make[5]: Entering directory '/<>/src/fdt' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fdt/ make[5]: Leaving directory '/<>/src/fdt' make[5]: Entering directory '/<>/src/fdt' make[5]: Leaving directory '/<>/src/fdt' make[4]: Leaving directory '/<>/src/fdt' make[3]: Leaving directory '/<>/src/fdt' make[2]: Leaving directory '/<>/src/fdt' make[1]: Leaving directory '/<>/src/fdt' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/first make[1]: Entering directory '/<>/src/first' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/first' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/first install make[1]: Entering directory '/<>/src/first' make[2]: Entering directory '/<>/src/first' make[3]: Entering directory '/<>/src/first' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/first' make[3]: Entering directory '/<>/src/first' make[4]: Entering directory '/<>/src/first' Installing stable binaries install -p -m 0775 first /<>/debian/tmp/bin/ install -p -m 0775 first_utils /<>/debian/tmp/bin/ install -p -m 0775 first_mult_bcorr /<>/debian/tmp/bin/ install -p -m 0775 run_first /<>/debian/tmp/bin/ install -p -m 0775 run_first_all /<>/debian/tmp/bin/ install -p -m 0775 first_flirt /<>/debian/tmp/bin/ install -p -m 0775 concat_bvars /<>/debian/tmp/bin/ install -p -m 0775 first_roi_slicesdir /<>/debian/tmp/bin/ install -p -m 0775 first_boundary_corr /<>/debian/tmp/bin/ install -p -m 0775 surface_fdr /<>/debian/tmp/bin/ install -p -m 0775 first3Dview /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/first' make[4]: Entering directory '/<>/src/first' make[5]: Entering directory '/<>/src/first' Installing stable header files make[5]: Leaving directory '/<>/src/first' make[5]: Entering directory '/<>/src/first' Installing stable library archives make[5]: Leaving directory '/<>/src/first' make[5]: Entering directory '/<>/src/first' Installing tcl scripts make[5]: Leaving directory '/<>/src/first' make[5]: Entering directory '/<>/src/first' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/first/ make[5]: Leaving directory '/<>/src/first' make[5]: Entering directory '/<>/src/first' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/first/ make[5]: Leaving directory '/<>/src/first' make[5]: Entering directory '/<>/src/first' make[5]: Leaving directory '/<>/src/first' make[4]: Leaving directory '/<>/src/first' make[3]: Leaving directory '/<>/src/first' make[2]: Leaving directory '/<>/src/first' make[1]: Leaving directory '/<>/src/first' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/possum make[1]: Entering directory '/<>/src/possum' /bin/cp read_pulse.m write_pulse.m /<>/debian/tmp/etc/matlab make[1]: Leaving directory '/<>/src/possum' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/possum install make[1]: Entering directory '/<>/src/possum' make[2]: Entering directory '/<>/src/possum' make[3]: Entering directory '/<>/src/possum' /bin/cp read_pulse.m write_pulse.m /<>/debian/tmp/etc/matlab make[3]: Leaving directory '/<>/src/possum' make[3]: Entering directory '/<>/src/possum' make[4]: Entering directory '/<>/src/possum' Installing stable binaries install -p -m 0775 possum /<>/debian/tmp/bin/ install -p -m 0775 spharm_rm /<>/debian/tmp/bin/ install -p -m 0775 signal2image /<>/debian/tmp/bin/ install -p -m 0775 pulse /<>/debian/tmp/bin/ install -p -m 0775 systemnoise /<>/debian/tmp/bin/ install -p -m 0775 possum_sum /<>/debian/tmp/bin/ install -p -m 0775 b0calc /<>/debian/tmp/bin/ install -p -m 0775 possum_matrix /<>/debian/tmp/bin/ install -p -m 0775 tcalc /<>/debian/tmp/bin/ install -p -m 0775 possumX /<>/debian/tmp/bin/ install -p -m 0775 possumX_postproc.sh /<>/debian/tmp/bin/ install -p -m 0775 generate_b0 /<>/debian/tmp/bin/ install -p -m 0775 generate_brain /<>/debian/tmp/bin/ install -p -m 0775 generate_b0calc /<>/debian/tmp/bin/ ln -s Runtcl Possum make[4]: Leaving directory '/<>/src/possum' make[4]: Entering directory '/<>/src/possum' make[5]: Entering directory '/<>/src/possum' Installing stable header files install -p -m 0664 possumfns.h /<>/include/possum/ make[5]: Leaving directory '/<>/src/possum' make[5]: Entering directory '/<>/src/possum' Installing stable library archives make[5]: Leaving directory '/<>/src/possum' make[5]: Entering directory '/<>/src/possum' Installing tcl scripts install -p -m 0775 possum.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/possum' make[5]: Entering directory '/<>/src/possum' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/possum/ make[5]: Leaving directory '/<>/src/possum' make[5]: Entering directory '/<>/src/possum' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/possum/ make[5]: Leaving directory '/<>/src/possum' make[5]: Entering directory '/<>/src/possum' make[5]: Leaving directory '/<>/src/possum' make[4]: Leaving directory '/<>/src/possum' make[3]: Leaving directory '/<>/src/possum' make[2]: Leaving directory '/<>/src/possum' make[1]: Leaving directory '/<>/src/possum' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/sgeutils make[1]: Entering directory '/<>/src/sgeutils' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/sgeutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/sgeutils install make[1]: Entering directory '/<>/src/sgeutils' make[2]: Entering directory '/<>/src/sgeutils' make[3]: Entering directory '/<>/src/sgeutils' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/sgeutils' make[3]: Entering directory '/<>/src/sgeutils' make[4]: Entering directory '/<>/src/sgeutils' Installing stable binaries install -p -c -m 0775 fsl_sub /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/sgeutils' make[4]: Entering directory '/<>/src/sgeutils' make[5]: Entering directory '/<>/src/sgeutils' Installing stable header files make[5]: Leaving directory '/<>/src/sgeutils' make[5]: Entering directory '/<>/src/sgeutils' Installing stable library archives make[5]: Leaving directory '/<>/src/sgeutils' make[5]: Entering directory '/<>/src/sgeutils' Installing tcl scripts make[5]: Leaving directory '/<>/src/sgeutils' make[5]: Entering directory '/<>/src/sgeutils' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/sgeutils/ make[5]: Leaving directory '/<>/src/sgeutils' make[5]: Entering directory '/<>/src/sgeutils' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/sgeutils/ make[5]: Leaving directory '/<>/src/sgeutils' make[5]: Entering directory '/<>/src/sgeutils' make[5]: Leaving directory '/<>/src/sgeutils' make[4]: Leaving directory '/<>/src/sgeutils' make[3]: Leaving directory '/<>/src/sgeutils' make[2]: Leaving directory '/<>/src/sgeutils' make[1]: Leaving directory '/<>/src/sgeutils' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/flameo make[1]: Entering directory '/<>/src/flameo' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/flameo' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/flameo install make[1]: Entering directory '/<>/src/flameo' make[2]: Entering directory '/<>/src/flameo' make[3]: Entering directory '/<>/src/flameo' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/flameo' make[3]: Entering directory '/<>/src/flameo' make[4]: Entering directory '/<>/src/flameo' Installing stable binaries install -p -m 0775 flameo /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/flameo' make[4]: Entering directory '/<>/src/flameo' make[5]: Entering directory '/<>/src/flameo' Installing stable header files install -p -m 0664 design.h /<>/include/flame/ install -p -m 0664 gam.h /<>/include/flame/ install -p -m 0664 gsmanager.h /<>/include/flame/ install -p -m 0664 gsoptions.h /<>/include/flame/ install -p -m 0664 mcmc.h /<>/include/flame/ install -p -m 0664 mcmc_mh.h /<>/include/flame/ make[5]: Leaving directory '/<>/src/flameo' make[5]: Entering directory '/<>/src/flameo' Installing stable library archives make[5]: Leaving directory '/<>/src/flameo' make[5]: Entering directory '/<>/src/flameo' Installing tcl scripts make[5]: Leaving directory '/<>/src/flameo' make[5]: Entering directory '/<>/src/flameo' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/flame/ make[5]: Leaving directory '/<>/src/flameo' make[5]: Entering directory '/<>/src/flameo' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/flame/ make[5]: Leaving directory '/<>/src/flameo' make[5]: Entering directory '/<>/src/flameo' make[5]: Leaving directory '/<>/src/flameo' make[4]: Leaving directory '/<>/src/flameo' make[3]: Leaving directory '/<>/src/flameo' make[2]: Leaving directory '/<>/src/flameo' make[1]: Leaving directory '/<>/src/flameo' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/oxford_asl make[1]: Entering directory '/<>/src/oxford_asl' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/oxford_asl' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/oxford_asl install make[1]: Entering directory '/<>/src/oxford_asl' make[2]: Entering directory '/<>/src/oxford_asl' make[3]: Entering directory '/<>/src/oxford_asl' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/oxford_asl' make[3]: Entering directory '/<>/src/oxford_asl' make[4]: Entering directory '/<>/src/oxford_asl' Installing stable binaries install -p -m 0775 asl_file /<>/debian/tmp/bin/ install -p -m 0775 oxford_asl /<>/debian/tmp/bin/ install -p -m 0775 asl_calib /<>/debian/tmp/bin/ install -p -m 0775 asl_reg /<>/debian/tmp/bin/ install -p -m 0775 quasil /<>/debian/tmp/bin/ ln -s Runtcl Asl make[4]: Leaving directory '/<>/src/oxford_asl' make[4]: Entering directory '/<>/src/oxford_asl' make[5]: Entering directory '/<>/src/oxford_asl' Installing stable header files install -p -m 0664 asl_functions.h /<>/include/oxford_asl/ install -p -m 0664 readoptions.h /<>/include/oxford_asl/ make[5]: Leaving directory '/<>/src/oxford_asl' make[5]: Entering directory '/<>/src/oxford_asl' Installing stable library archives make[5]: Leaving directory '/<>/src/oxford_asl' make[5]: Entering directory '/<>/src/oxford_asl' Installing tcl scripts install -p -m 0775 asl.tcl /<>/debian/tmp/tcl/ make[5]: Leaving directory '/<>/src/oxford_asl' make[5]: Entering directory '/<>/src/oxford_asl' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/oxford_asl/ make[5]: Leaving directory '/<>/src/oxford_asl' make[5]: Entering directory '/<>/src/oxford_asl' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/oxford_asl/ make[5]: Leaving directory '/<>/src/oxford_asl' make[5]: Entering directory '/<>/src/oxford_asl' make[5]: Leaving directory '/<>/src/oxford_asl' make[4]: Leaving directory '/<>/src/oxford_asl' make[3]: Leaving directory '/<>/src/oxford_asl' make[2]: Leaving directory '/<>/src/oxford_asl' make[1]: Leaving directory '/<>/src/oxford_asl' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/qboot make[1]: Entering directory '/<>/src/qboot' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/qboot' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/qboot install make[1]: Entering directory '/<>/src/qboot' make[2]: Entering directory '/<>/src/qboot' make[3]: Entering directory '/<>/src/qboot' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/qboot' make[3]: Entering directory '/<>/src/qboot' make[4]: Entering directory '/<>/src/qboot' Installing stable binaries install -p -m 0775 qboot /<>/debian/tmp/bin/ install -p -m 0775 qboot_parallel /<>/debian/tmp/bin/ install -p -m 0775 qboot_postproc.sh /<>/debian/tmp/bin/ install -p -m 0775 qboot_preproc.sh /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/qboot' make[4]: Entering directory '/<>/src/qboot' make[5]: Entering directory '/<>/src/qboot' Installing stable header files install -p -m 0664 peakfinder.h /<>/include/qboot/ install -p -m 0664 qboot.h /<>/include/qboot/ install -p -m 0664 qbootOptions.h /<>/include/qboot/ install -p -m 0664 sphere_tessellation.h /<>/include/qboot/ make[5]: Leaving directory '/<>/src/qboot' make[5]: Entering directory '/<>/src/qboot' Installing stable library archives make[5]: Leaving directory '/<>/src/qboot' make[5]: Entering directory '/<>/src/qboot' Installing tcl scripts make[5]: Leaving directory '/<>/src/qboot' make[5]: Entering directory '/<>/src/qboot' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/qboot/ make[5]: Leaving directory '/<>/src/qboot' make[5]: Entering directory '/<>/src/qboot' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/qboot/ make[5]: Leaving directory '/<>/src/qboot' make[5]: Entering directory '/<>/src/qboot' make[5]: Leaving directory '/<>/src/qboot' make[4]: Leaving directory '/<>/src/qboot' make[3]: Leaving directory '/<>/src/qboot' make[2]: Leaving directory '/<>/src/qboot' make[1]: Leaving directory '/<>/src/qboot' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/topup make[1]: Entering directory '/<>/src/topup' /bin/cp -rf flirtsch/* /<>/debian/tmp/etc/flirtsch/. make[1]: Leaving directory '/<>/src/topup' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/topup install make[1]: Entering directory '/<>/src/topup' make[2]: Entering directory '/<>/src/topup' make[3]: Entering directory '/<>/src/topup' /bin/cp -rf flirtsch/* /<>/debian/tmp/etc/flirtsch/. make[3]: Leaving directory '/<>/src/topup' make[3]: Entering directory '/<>/src/topup' make[4]: Entering directory '/<>/src/topup' Installing stable binaries install -p -m 0775 topup /<>/debian/tmp/bin/ install -p -m 0775 applytopup /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/topup' make[4]: Entering directory '/<>/src/topup' make[5]: Entering directory '/<>/src/topup' Installing stable header files install -p -m 0664 applytopup.h /<>/include/topup/ install -p -m 0664 displacement_vector.h /<>/include/topup/ install -p -m 0664 topup_costfunctions.h /<>/include/topup/ install -p -m 0664 topup_file_io.h /<>/include/topup/ install -p -m 0664 topupfns.h /<>/include/topup/ make[5]: Leaving directory '/<>/src/topup' make[5]: Entering directory '/<>/src/topup' Installing stable library archives make[5]: Leaving directory '/<>/src/topup' make[5]: Entering directory '/<>/src/topup' Installing tcl scripts make[5]: Leaving directory '/<>/src/topup' make[5]: Entering directory '/<>/src/topup' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/topup/ make[5]: Leaving directory '/<>/src/topup' make[5]: Entering directory '/<>/src/topup' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/topup/ make[5]: Leaving directory '/<>/src/topup' make[5]: Entering directory '/<>/src/topup' make[5]: Leaving directory '/<>/src/topup' make[4]: Leaving directory '/<>/src/topup' make[3]: Leaving directory '/<>/src/topup' make[2]: Leaving directory '/<>/src/topup' make[1]: Leaving directory '/<>/src/topup' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/ptx2 make[1]: Entering directory '/<>/src/ptx2' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/ptx2' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/ptx2 install make[1]: Entering directory '/<>/src/ptx2' make[2]: Entering directory '/<>/src/ptx2' make[3]: Entering directory '/<>/src/ptx2' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/ptx2' make[3]: Entering directory '/<>/src/ptx2' make[4]: Entering directory '/<>/src/ptx2' Installing stable binaries install -p -m 0775 probtrackx2 /<>/debian/tmp/bin/ install -p -m 0775 surf2surf /<>/debian/tmp/bin/ install -p -m 0775 surf2volume /<>/debian/tmp/bin/ install -p -m 0775 surf_proj /<>/debian/tmp/bin/ install -p -m 0775 label2surf /<>/debian/tmp/bin/ install -p -m 0775 find_the_biggest /<>/debian/tmp/bin/ install -p -m 0775 proj_thresh /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/ptx2' make[4]: Entering directory '/<>/src/ptx2' make[5]: Entering directory '/<>/src/ptx2' Installing stable header files install -p -m 0664 ccops.h /<>/include/fdt/ install -p -m 0664 ccopsOptions.h /<>/include/fdt/ install -p -m 0664 commonopts.h /<>/include/fdt/ install -p -m 0664 csv.h /<>/include/fdt/ install -p -m 0664 csv_mesh.h /<>/include/fdt/ install -p -m 0664 particle.h /<>/include/fdt/ install -p -m 0664 probtrackx.h /<>/include/fdt/ install -p -m 0664 probtrackxOptions.h /<>/include/fdt/ install -p -m 0664 ptx_meshmask.h /<>/include/fdt/ install -p -m 0664 ptx_nmasks.h /<>/include/fdt/ install -p -m 0664 ptx_seedmask.h /<>/include/fdt/ install -p -m 0664 ptx_simple.h /<>/include/fdt/ install -p -m 0664 streamlines.h /<>/include/fdt/ install -p -m 0664 tractvolsx.h /<>/include/fdt/ make[5]: Leaving directory '/<>/src/ptx2' make[5]: Entering directory '/<>/src/ptx2' Installing stable library archives make[5]: Leaving directory '/<>/src/ptx2' make[5]: Entering directory '/<>/src/ptx2' Installing tcl scripts make[5]: Leaving directory '/<>/src/ptx2' make[5]: Entering directory '/<>/src/ptx2' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/fdt/ make[5]: Leaving directory '/<>/src/ptx2' make[5]: Entering directory '/<>/src/ptx2' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/fdt/ make[5]: Leaving directory '/<>/src/ptx2' make[5]: Entering directory '/<>/src/ptx2' make[5]: Leaving directory '/<>/src/ptx2' make[4]: Leaving directory '/<>/src/ptx2' make[3]: Leaving directory '/<>/src/ptx2' make[2]: Leaving directory '/<>/src/ptx2' make[1]: Leaving directory '/<>/src/ptx2' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/lesions make[1]: Entering directory '/<>/src/lesions' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/lesions' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/lesions install make[1]: Entering directory '/<>/src/lesions' make[2]: Entering directory '/<>/src/lesions' make[3]: Entering directory '/<>/src/lesions' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/lesions' make[3]: Entering directory '/<>/src/lesions' make[4]: Entering directory '/<>/src/lesions' Installing stable binaries install -p -m 0775 lesion_filling /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/lesions' make[4]: Entering directory '/<>/src/lesions' make[5]: Entering directory '/<>/src/lesions' Installing stable header files make[5]: Leaving directory '/<>/src/lesions' make[5]: Entering directory '/<>/src/lesions' Installing stable library archives make[5]: Leaving directory '/<>/src/lesions' make[5]: Entering directory '/<>/src/lesions' Installing tcl scripts make[5]: Leaving directory '/<>/src/lesions' make[5]: Entering directory '/<>/src/lesions' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/lesions/ make[5]: Leaving directory '/<>/src/lesions' make[5]: Entering directory '/<>/src/lesions' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/lesions/ make[5]: Leaving directory '/<>/src/lesions' make[5]: Entering directory '/<>/src/lesions' make[5]: Leaving directory '/<>/src/lesions' make[4]: Leaving directory '/<>/src/lesions' make[3]: Leaving directory '/<>/src/lesions' make[2]: Leaving directory '/<>/src/lesions' make[1]: Leaving directory '/<>/src/lesions' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/eddy make[1]: Entering directory '/<>/src/eddy' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/<>/src/eddy' LD_LIBRARY_PATH=/<>/lib${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} FSLDIR="/<>" FSLDEVDIR="/<>" FSLCONFDIR="/<>/config" DEB_DESTDIR="/<>/debian/tmp" OPTFLAGS="" ANSI_FLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src " DEPENDFLAGS="-g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_LIBFREETYPE -fPIC -I/usr/include/nifti -I/usr/include/gifti -I/usr/include/newmat -I/<>/extras/src/libprob -I/<>/extras/src/libcprob -I/<>/src" ARCHLDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--no-undefined -L/usr/lib/fsl/lib" COMPILE_GPU="0" CUDA="/usr" /usr/bin/make -C src/eddy install make[1]: Entering directory '/<>/src/eddy' make[2]: Entering directory '/<>/src/eddy' make[3]: Entering directory '/<>/src/eddy' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/src/eddy' make[3]: Entering directory '/<>/src/eddy' make[4]: Entering directory '/<>/src/eddy' Installing stable binaries install -p -m 0775 eddy /<>/debian/tmp/bin/ make[4]: Leaving directory '/<>/src/eddy' make[4]: Entering directory '/<>/src/eddy' make[5]: Entering directory '/<>/src/eddy' Installing stable header files install -p -m 0664 DWIPredictionMaker.h /<>/include/eddy/ install -p -m 0664 DiffusionGP.h /<>/include/eddy/ install -p -m 0664 ECModels.h /<>/include/eddy/ install -p -m 0664 ECScanClasses.h /<>/include/eddy/ install -p -m 0664 EddyCommandLineOptions.h /<>/include/eddy/ install -p -m 0664 EddyHelperClasses.h /<>/include/eddy/ install -p -m 0664 EddyUtils.h /<>/include/eddy/ install -p -m 0664 b0Predictor.h /<>/include/eddy/ make[5]: Leaving directory '/<>/src/eddy' make[5]: Entering directory '/<>/src/eddy' Installing stable library archives make[5]: Leaving directory '/<>/src/eddy' make[5]: Entering directory '/<>/src/eddy' Installing tcl scripts make[5]: Leaving directory '/<>/src/eddy' make[5]: Entering directory '/<>/src/eddy' Installing (userguide) documents /bin/chmod -R ug+w /<>/debian/tmp/doc/eddy/ make[5]: Leaving directory '/<>/src/eddy' make[5]: Entering directory '/<>/src/eddy' Installing reference documents /bin/chmod -R ug+w /<>/debian/tmp/refdoc/eddy/ make[5]: Leaving directory '/<>/src/eddy' make[5]: Entering directory '/<>/src/eddy' make[5]: Leaving directory '/<>/src/eddy' make[4]: Leaving directory '/<>/src/eddy' make[3]: Leaving directory '/<>/src/eddy' make[2]: Leaving directory '/<>/src/eddy' make[1]: Leaving directory '/<>/src/eddy' dh_testdir # fix permissions find debian/tmp/tcl/BWidget -type f -exec chmod -x {} \; chmod 644 debian/tmp/tcl/*.{tcl,xbm,ppm,ico} chmod -x debian/tmp/etc/flirtsch/* # cleanup TCL stuff rm -r debian/tmp/tcl/BWidget/BWMan/ find debian/tmp/tcl/BWidget/ -name '*.txt' -delete # generate debhelper file to create /usr/bin symlinks and manpage links # for all relevant binaries installed by the versioned FSL package for f in $(find debian/tmp/bin \! -type d \! -name Runtcl | sort); do \ bname=$(basename $f); \ [[ "$bname" = *gpu* ]] && ptype="gpu" || ptype="core" ; \ echo "/usr/lib/fsl/5.0/fsl_app_wrapper /usr/bin/fsl5.0-$bname" >> debian/fsl-5.0-$ptype.links ; \ echo "/usr/share/man/man1/fsl-5.0.1.gz /usr/share/man/man1/fsl5.0-${bname}.1.gz" >> debian/fsl-5.0-$ptype.links ; \ done touch build-stamp # make FSL logo for menu entries convert debian/tmp/tcl/fsl-logo-tiny.ppm \ -resize x32 -crop 32x32+6+0 debian/tmp/fsl-5.0.xpm # install fsl config cp -r -t debian/tmp etc # clean useless pieces rm debian/tmp/etc/fslconf/fslmachtype.sh # do not install license files rm debian/tmp/etc/js/LICENSE.txt # comes in an dedicated package rm debian/tmp/etc/js/excanvas.js dh_installdirs -a # install the stylesheet cp -r doc/fsl.css debian/fsl-5.0-core/usr/share/fsl/5.0/doc # remove previous link to make repeated builds work rm debian/fsl-5.0-core/usr/share/fsl/5.0/etc/fslconf/{feat.tcl,fsl.sh} rm: cannot remove 'debian/fsl-5.0-core/usr/share/fsl/5.0/etc/fslconf/feat.tcl': No such file or directory rm: cannot remove 'debian/fsl-5.0-core/usr/share/fsl/5.0/etc/fslconf/fsl.sh': No such file or directory make: [debian/rules:257: binary-arch] Error 1 (ignored) # set execute permission for GUI application wrapper chmod +x debian/fsl_app_wrapper /usr/bin/make -f debian/rules DH_OPTIONS=-a binary-common make[1]: Entering directory '/<>' dh_testdir dh_testroot dh_install dh_installchangelogs dh_installman dh_installdocs dh_installmenu # fixup duplicate GPU tools rm -f debian/fsl-5.0-core/usr/lib/fsl/5.0/*gpu* rm -f debian/fsl-5.0-core/usr/lib/fsl/5.0/*cuda* dh_lintian dh_link dh_strip dh_compress dh_fixperms dh_installdeb # dh_shlibdeps needs access to the private libs dh_shlibdeps -l /<>/lib dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/fsl-5.0-core/usr/lib/fsl/5.0/probtrackx2 debian/fsl-5.0-core/usr/lib/fsl/5.0/label2surf debian/fsl-5.0-core/usr/lib/fsl/5.0/qboot debian/fsl-5.0-core/usr/lib/fsl/5.0/surf_proj debian/fsl-5.0-core/usr/lib/fsl/5.0/surf2volume debian/fsl-5.0-core/usr/lib/fsl/5.0/surf2surf debian/fsl-5.0-core/usr/lib/fsl/5.0/find_the_biggest were not linked against libcprob.so (they use none of the library's symbols) # get the correct dependency for older octave [ -e /usr/bin/octave-depends ] \ && octave-depends || true dh_gencontrol dpkg-gencontrol: warning: Suggests field of package fsl-5.0-core: substitution variable ${octave:Depends} used, but is not defined dh_md5sums dh_builddeb INFO: pkgstriptranslations version 144 pkgstriptranslations: processing fsl-5.0-core (in debian/fsl-5.0-core); do_strip: , oemstrip: debian/fsl-5.0-core/usr/share/applications/fsl-5.0-core.desktop: does not have gettext domain, not stripping pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/fsl-5.0-core/DEBIAN/control, package fsl-5.0-core, directory debian/fsl-5.0-core pkgstripfiles: Truncating usr/share/doc/fsl-5.0-core/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package fsl-5.0-core ... oooooo pkgstripfiles: PNG optimization (6/0) for package fsl-5.0-core took 4 s dpkg-deb: building package 'fsl-5.0-core' in '../fsl-5.0-core_5.0.8-6_ppc64el.deb'. make[1]: Leaving directory '/<>' dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../fsl_5.0.8-6_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20190629-0608 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ fsl_5.0.8-6_ppc64el.changes: ---------------------------- Format: 1.8 Date: Tue, 15 Jan 2019 16:42:15 +0100 Source: fsl Binary: fsl-5.0-core Architecture: ppc64el Version: 5.0.8-6 Distribution: eoan Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: fsl-5.0-core - analysis tools for FMRI, MRI and DTI brain imaging Closes: 804881 837361 864178 Changes: fsl (5.0.8-6) unstable; urgency=medium . * Team upload. . [ Yaroslav Halchenko ] * Add 'file' to Depends of fsl-5.0-core. Required by fslFixText utility * debian/fsl.sh - place FSL's bin path first (not the last) within adjusted $PATH (Closes: #804881) * debian/patches/up_in_compar to fix FTBFS of melodic on 17.04 Closes: #837361 . [ Michael Hanke ] * Move 'fslview' from a dependency into suggests. It can no longer be built in Debian unstable. Closes: #864178 . [ Andreas Tille ] * Replace watch line pointing to alioth which does not exist any more by fake watch file * debhelper 9 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.3.0 * Fix call of overloaded 'round(float)' is ambiguous * Silence lintian about false positive spelling * fsl-5.0-core Depends: sensible-utils * Drop Encoding key from desktop file * Drop Debian menu file (since there is a desktop file) * hardening=+all Checksums-Sha1: aaeb4a4eb4737a2463c78c0178fbaa206db35b4e 8288156 fsl-5.0-core_5.0.8-6_ppc64el.deb 6e76fad3e058b2d6365bf815a1240f133c0aabac 13728 fsl_5.0.8-6_ppc64el.buildinfo Checksums-Sha256: 2cf582ac65a9f74696fd229158171e99983b1d72919fbd85da7a90601a8a35e5 8288156 fsl-5.0-core_5.0.8-6_ppc64el.deb 9b71b651b8d91336e61600a7dee54ea9f8911d5ce3eac2bc88586693ae1bd620 13728 fsl_5.0.8-6_ppc64el.buildinfo Files: 0b60c2eb9f7725ead59f0c476c72dc61 8288156 non-free/science optional fsl-5.0-core_5.0.8-6_ppc64el.deb 19c732742889881258b307767da3d702 13728 non-free/science optional fsl_5.0.8-6_ppc64el.buildinfo +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ fsl-5.0-core_5.0.8-6_ppc64el.deb -------------------------------- new debian package, version 2.0. size 8288156 bytes: control archive=13916 bytes. 42 bytes, 2 lines conffiles 1961 bytes, 36 lines control 34458 bytes, 508 lines md5sums Package: fsl-5.0-core Source: fsl Version: 5.0.8-6 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: NeuroDebian Team Installed-Size: 50424 Depends: mozilla-firefox | www-browser, file, tcsh | c-shell, tk, tcl, bc, dc, python, libjs-excanvas, libc6 (>= 2.29), libgcc1 (>= 1:3.0), libgd3 (>= 2.1.0~alpha~), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libgiftiio0, libgomp1 (>= 4.9), libnewmat10ldbl, libnifti2, libpng16-16 (>= 1.6.2-1), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4), sensible-utils Recommends: fsl-atlases Suggests: fsl-feeds, fsl-5.0-gpu, octave, mriconvert | dicomnifti, fsl-complete, condor | gridengine-client, fslview Conflicts: fsl-fslview Replaces: fsl-5.0 (<< 5.0.3) Provides: fsl Section: non-free/science Priority: optional Homepage: http://www.fmrib.ox.ac.uk/fsl/ Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Some FSL components require additional data packages (fsl-atlases, fsl-first-data, fsl-possum-data) that are currently available from the NeuroDebian repository only. For more information on how to obtain these data packages visit http://neuro.debian.net. . Users aiming to perform a complete FSL 5.0 installation (including all data components) are advised to install the 'fsl-5.0-complete' package from NeuroDebian. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. drwxr-xr-x root/root 0 2019-01-15 15:42 ./ drwxr-xr-x root/root 0 2019-01-15 15:42 ./etc/ drwxr-xr-x root/root 0 2019-01-15 15:42 ./etc/fsl/ drwxr-xr-x root/root 0 2019-01-15 15:42 ./etc/fsl/5.0/ -rw-r--r-- root/root 6297 2019-01-15 15:42 ./etc/fsl/5.0/feat.tcl -rw-r--r-- root/root 2733 2019-01-15 15:42 ./etc/fsl/5.0/fsl.sh drwxr-xr-x root/root 0 2019-01-15 15:42 ./usr/ drwxr-xr-x root/root 0 2019-01-15 15:42 ./usr/bin/ lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-AnatomicalAverage -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-ApplyXFM -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Asl -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Bet -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-ConcatXFM -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Fast -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Fdt -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Feat -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Featquery -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Flirt -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Fsl_prepare_fieldmap -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Glm -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-InvertXFM -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Make_flobs -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Melodic -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Nudge -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Pnm -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Possum -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Renderhighres -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Renderstats -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Susan -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Text2Vest -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-Vest2Text -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-aff2rigid -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-applytopup -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-applywarp -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-applyxfm4D -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-asl_calib -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-asl_file -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-asl_mfree -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-asl_reg -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-autoaq -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-avscale -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-avw2fsl -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-b0calc -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-basil -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-basil_var -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-baycest -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-bedpost -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-bedpostx -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-bedpostx_datacheck -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-bedpostx_postproc.sh -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-bedpostx_preproc.sh -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-bedpostx_single_slice.sh -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-bet -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-bet2 -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-betsurf -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-calc_grad_perc_dev -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-ccops -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-checkFEAT -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-cluster -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-cluster2html -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-concat_bvars -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-connectedcomp -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-contrast_mgr -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-convert_xfm -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-convertwarp -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-create_lut -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-cutoffcalc -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-design_ttest2 -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-distancemap -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-drawmesh -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-dtifit -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-dtigen -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-dual_regression -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-easythresh -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-eddy -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-eddy_combine -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-eddy_correct -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-epi_reg -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-estnoise -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-extractfidparams -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-extracttxt -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fabber -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fabber_var -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fast -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fdr -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fdt_rotate_bvecs -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-feat -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-feat_gm_prepare -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-feat_model -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-featquery -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-featregapply -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-film_gls -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-filmbabe -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-filmbabescript -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-find_the_biggest -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-first -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-first3Dview -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-first_boundary_corr -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-first_flirt -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-first_mult_bcorr -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-first_roi_slicesdir -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-first_utils -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-flameo -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-flirt -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-flirt_average -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fnirt -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fnirtfileutils -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl2ascii -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslFixText -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_abspath -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_anat -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_boxplot -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_glm -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_gui -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_histogram -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_motion_outliers -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_mvlm -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_prepare_fieldmap -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_reg -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_regfilt -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_sbca -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_schurprod -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_sub -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsl_tsplot -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsladd -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslanimate -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslascii2img -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslcc -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslchfiletype -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslchfiletype_exe -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslchpixdim -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslcomplex -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslcorrecthd -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslcpgeom -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslcreatehd -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslecho -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fsledithd -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslerrorreport -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslfft -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslhd -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslinfo -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslinterleave -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslmaths -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslmeants -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslmerge -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslmodhd -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslnvols -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslorient -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslpspec -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslreorient2std -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslroi -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslselectvols -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslsize -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslslice -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslsmoothfill -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslsplit -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslstats -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslsurfacemaths -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslswapdim -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslswapdim_exe -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslval -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslvbm_1_bet -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslvbm_2_template -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fslvbm_3_proc -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-ftoz -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-fugue -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-generateConfounds -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-generate_b0 -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-generate_b0calc -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-generate_brain -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-gps -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-halfcosbasis -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-hist2prob -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-imcp -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-img2imgcoord -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-img2stdcoord -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-imglob -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-imln -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-immv -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-imrm -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-imtest -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-invfeatreg -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-invwarp -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-invwarp_exe -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-label2surf -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-lesion_filling -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-mainfeatreg -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-make_dyadic_vectors -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-makerot -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-maskdyads -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-match_smoothing -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-mccutup -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-mcflirt -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-mean -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-medianfilter -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-melodic -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-midtrans -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-mm -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-morph_kernel -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-mp_diffpow.sh -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-mvntool -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-new_invwarp -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-old_betall -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-overlay -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-oxford_asl -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-pairreg -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-perfusion_subtract -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-pngappend -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-pnm_evs -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-pnm_stage1 -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-pointflirt -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-popp -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-possum -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-possumX -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-possumX_postproc.sh -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-possum_matrix -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-possum_sum -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-prelude -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-prewhiten -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-probtrack -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-probtrackx -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-probtrackx2 -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-proj_thresh -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-ptoz -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-pulse -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-pvmfit -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-qboot -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-qboot_parallel -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-qboot_postproc.sh -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-qboot_preproc.sh -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-quasil -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-randomise -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-randomise_parallel -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-remove_ext -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-renderhighres -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-rmsdiff -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-robustfov -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-run_first -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-run_first_all -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-run_mesh_utils -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-selfintersection -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-setFEAT -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-setup_masks -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-siena -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-siena_cal -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-siena_diff -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-siena_flirt -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-siena_flow2std -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-sienax -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-sigloss -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-signal2image -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-sliceanimate -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-slicer -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-slices -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-slices_summary -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-slicesdir -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-slicesmask -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-slicetimer -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-smoothest -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-spharm_rm -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-standard_space_roi -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-std2imgcoord -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-surf2surf -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-surf2volume -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-surf_proj -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-surface_fdr -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-susan -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-swap_subjectwise -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-swap_voxelwise -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-systemnoise -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tbss_1_preproc -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tbss_2_reg -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tbss_3_postreg -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tbss_4_prestats -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tbss_deproject -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tbss_fill -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tbss_non_FA -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tbss_skeleton -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tbss_sym -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tbss_x -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tcalc -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tmpnam -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-topup -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-tsplot -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-ttologp -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-ttoz -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-unconfound -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-updatefeatreg -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-vecreg -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-viena_createpng -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-viena_quant -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-whirlgif -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-wpng -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-xfibres -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-zeropad -> ../lib/fsl/5.0/fsl_app_wrapper lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/bin/fsl5.0-ztop -> ../lib/fsl/5.0/fsl_app_wrapper drwxr-xr-x root/root 0 2019-01-15 15:42 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-15 15:42 ./usr/lib/fsl/ drwxr-xr-x root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/ -rwxr-xr-x root/root 6222 2014-06-25 13:50 ./usr/lib/fsl/5.0/AnatomicalAverage lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/ApplyXFM -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Asl -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Bet -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/ConcatXFM -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Fast -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Fdt -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Feat -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Featquery -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Flirt -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Fsl_prepare_fieldmap -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Glm -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/InvertXFM -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Make_flobs -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Melodic -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Nudge -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Pnm -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Possum -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Renderhighres -> Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Renderstats -> Runtcl -rwxr-xr-x root/root 1131 2019-01-15 15:42 ./usr/lib/fsl/5.0/Runtcl lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/Susan -> Runtcl -rwxr-xr-x root/root 3708 2014-12-03 11:18 ./usr/lib/fsl/5.0/Text2Vest -rwxr-xr-x root/root 3514 2014-12-03 11:18 ./usr/lib/fsl/5.0/Vest2Text -rwxr-xr-x root/root 5245 2014-12-03 11:18 ./usr/lib/fsl/5.0/aff2rigid -rwxr-xr-x root/root 788696 2019-01-15 15:42 ./usr/lib/fsl/5.0/applytopup -rwxr-xr-x root/root 657624 2019-01-15 15:42 ./usr/lib/fsl/5.0/applywarp -rwxr-xr-x root/root 67776 2019-01-15 15:42 ./usr/lib/fsl/5.0/applyxfm4D -rwxr-xr-x root/root 26441 2014-12-03 11:19 ./usr/lib/fsl/5.0/asl_calib -rwxr-xr-x root/root 133336 2019-01-15 15:42 ./usr/lib/fsl/5.0/asl_file -rwxr-xr-x root/root 133336 2019-01-15 15:42 ./usr/lib/fsl/5.0/asl_mfree -rwxr-xr-x root/root 8086 2014-12-03 11:19 ./usr/lib/fsl/5.0/asl_reg lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/atlasquery -> ../../../bin/atlasquery -rwxr-xr-x root/root 4714 2014-06-25 13:48 ./usr/lib/fsl/5.0/autoaq -rwxr-xr-x root/root 67784 2019-01-15 15:42 ./usr/lib/fsl/5.0/avscale -rwxr-xr-x root/root 7144 2014-12-03 11:17 ./usr/lib/fsl/5.0/avw2fsl -rwxr-xr-x root/root 133328 2019-01-15 15:42 ./usr/lib/fsl/5.0/b0calc -rwxr-xr-x root/root 20548 2014-12-03 11:17 ./usr/lib/fsl/5.0/basil -rwxr-xr-x root/root 4702 2014-12-03 11:17 ./usr/lib/fsl/5.0/basil_var -rwxr-xr-x root/root 4850 2014-12-03 11:17 ./usr/lib/fsl/5.0/baycest -rwxr-xr-x root/root 3570 2014-12-03 11:18 ./usr/lib/fsl/5.0/bedpost -rwxr-xr-x root/root 10693 2019-01-15 15:42 ./usr/lib/fsl/5.0/bedpostx -rwxr-xr-x root/root 5322 2014-12-03 11:18 ./usr/lib/fsl/5.0/bedpostx_datacheck -rwxr-xr-x root/root 7330 2014-12-03 11:18 ./usr/lib/fsl/5.0/bedpostx_postproc.sh -rwxr-xr-x root/root 3929 2014-12-03 11:18 ./usr/lib/fsl/5.0/bedpostx_preproc.sh -rwxr-xr-x root/root 3759 2014-12-03 11:18 ./usr/lib/fsl/5.0/bedpostx_single_slice.sh -rwxr-xr-x root/root 13727 2014-12-03 11:17 ./usr/lib/fsl/5.0/bet -rwxr-xr-x root/root 133328 2019-01-15 15:42 ./usr/lib/fsl/5.0/bet2 -rwxr-xr-x root/root 133328 2019-01-15 15:42 ./usr/lib/fsl/5.0/betsurf -rwxr-xr-x root/root 133328 2019-01-15 15:42 ./usr/lib/fsl/5.0/calc_grad_perc_dev -rwxr-xr-x root/root 133328 2019-01-15 15:42 ./usr/lib/fsl/5.0/ccops -rwxr-xr-x root/root 3849 2014-12-03 11:18 ./usr/lib/fsl/5.0/checkFEAT -rwxr-xr-x root/root 854232 2019-01-15 15:42 ./usr/lib/fsl/5.0/cluster -rwxr-xr-x root/root 5792 2014-12-03 11:17 ./usr/lib/fsl/5.0/cluster2html -rwxr-xr-x root/root 4523 2014-12-03 11:18 ./usr/lib/fsl/5.0/concat_bvars -rwxr-xr-x root/root 67776 2019-01-15 15:42 ./usr/lib/fsl/5.0/connectedcomp -rwxr-xr-x root/root 526544 2019-01-15 15:42 ./usr/lib/fsl/5.0/contrast_mgr -rwxr-xr-x root/root 67776 2019-01-15 15:42 ./usr/lib/fsl/5.0/convert_xfm -rwxr-xr-x root/root 592096 2019-01-15 15:42 ./usr/lib/fsl/5.0/convertwarp -rwxr-xr-x root/root 67688 2019-01-15 15:42 ./usr/lib/fsl/5.0/create_lut -rwxr-xr-x root/root 133328 2019-01-15 15:42 ./usr/lib/fsl/5.0/cutoffcalc -rwxr-xr-x root/root 4304 2014-12-03 11:19 ./usr/lib/fsl/5.0/design_ttest2 -rwxr-xr-x root/root 133328 2019-01-15 15:42 ./usr/lib/fsl/5.0/distancemap -rwxr-xr-x root/root 133312 2019-01-15 15:42 ./usr/lib/fsl/5.0/drawmesh -rwxr-xr-x root/root 395472 2019-01-15 15:42 ./usr/lib/fsl/5.0/dtifit -rwxr-xr-x root/root 67792 2019-01-15 15:42 ./usr/lib/fsl/5.0/dtigen -rwxr-xr-x root/root 7765 2014-12-03 11:18 ./usr/lib/fsl/5.0/dual_regression -rwxr-xr-x root/root 4909 2014-12-03 11:18 ./usr/lib/fsl/5.0/easythresh -rwxr-xr-x root/root 919768 2019-01-15 15:42 ./usr/lib/fsl/5.0/eddy -rwxr-xr-x root/root 67792 2019-01-15 15:42 ./usr/lib/fsl/5.0/eddy_combine -rwxr-xr-x root/root 4306 2014-12-03 11:18 ./usr/lib/fsl/5.0/eddy_correct -rwxr-xr-x root/root 14482 2014-12-03 11:18 ./usr/lib/fsl/5.0/epi_reg -rwxr-xr-x root/root 4689 2014-12-03 11:18 ./usr/lib/fsl/5.0/estnoise -rwxr-xr-x root/root 5063 2014-12-03 11:18 ./usr/lib/fsl/5.0/extractfidparams -rwxr-xr-x root/root 4050 2014-12-03 11:18 ./usr/lib/fsl/5.0/extracttxt -rwxr-xr-x root/root 1116392 2019-01-15 15:42 ./usr/lib/fsl/5.0/fabber -rwxr-xr-x root/root 4528 2014-12-03 11:17 ./usr/lib/fsl/5.0/fabber_var -rwxr-xr-x root/root 329952 2019-01-15 15:42 ./usr/lib/fsl/5.0/fast -rwxr-xr-x root/root 133328 2019-01-15 15:42 ./usr/lib/fsl/5.0/fdr -rwxr-xr-x root/root 2159 2012-11-09 08:58 ./usr/lib/fsl/5.0/fdt_rotate_bvecs -rwxr-xr-x root/root 30880 2014-12-03 11:18 ./usr/lib/fsl/5.0/feat -rwxr-xr-x root/root 6158 2014-12-03 11:18 ./usr/lib/fsl/5.0/feat_gm_prepare -rwxr-xr-x root/root 198848 2019-01-15 15:42 ./usr/lib/fsl/5.0/feat_model -rwxr-xr-x root/root 16542 2014-12-03 11:18 ./usr/lib/fsl/5.0/featquery -rwxr-xr-x root/root 9511 2014-12-03 11:18 ./usr/lib/fsl/5.0/featregapply -rwxr-xr-x root/root 657632 2019-01-15 15:42 ./usr/lib/fsl/5.0/film_gls -rwxr-xr-x root/root 264408 2019-01-15 15:42 ./usr/lib/fsl/5.0/filmbabe -rwxr-xr-x root/root 5515 2014-12-03 11:18 ./usr/lib/fsl/5.0/filmbabescript -rwxr-xr-x root/root 329920 2019-01-15 15:42 ./usr/lib/fsl/5.0/find_the_biggest -rwxr-xr-x root/root 133336 2019-01-15 15:42 ./usr/lib/fsl/5.0/first -rwxr-xr-x root/root 4406 2014-12-03 11:18 ./usr/lib/fsl/5.0/first3Dview -rwxr-xr-x root/root 9414 2014-12-03 11:18 ./usr/lib/fsl/5.0/first_boundary_corr -rwxr-xr-x root/root 6584 2014-12-03 11:18 ./usr/lib/fsl/5.0/first_flirt -rwxr-xr-x root/root 67792 2019-01-15 15:42 ./usr/lib/fsl/5.0/first_mult_bcorr -rwxr-xr-x root/root 5456 2014-12-03 11:18 ./usr/lib/fsl/5.0/first_roi_slicesdir -rwxr-xr-x root/root 198888 2019-01-15 15:42 ./usr/lib/fsl/5.0/first_utils -rwxr-xr-x root/root 329944 2019-01-15 15:42 ./usr/lib/fsl/5.0/flameo -rwxr-xr-x root/root 264400 2019-01-15 15:42 ./usr/lib/fsl/5.0/flirt -rwxr-xr-x root/root 4768 2014-12-03 11:18 ./usr/lib/fsl/5.0/flirt_average -rwxr-xr-x root/root 1050848 2019-01-15 15:42 ./usr/lib/fsl/5.0/fnirt -rwxr-xr-x root/root 657624 2019-01-15 15:42 ./usr/lib/fsl/5.0/fnirtfileutils lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl -> Runtcl -rwxr-xr-x root/root 67776 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl2ascii -rwxr-xr-x root/root 925 2014-03-14 14:53 ./usr/lib/fsl/5.0/fslFixText -rwxr-xr-x root/root 3546 2014-12-03 11:18 ./usr/lib/fsl/5.0/fsl_abspath -rwxr-xr-x root/root 26701 2014-12-03 11:18 ./usr/lib/fsl/5.0/fsl_anat -rwxr-xr-x root/root 1111 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl_app_wrapper -rwxr-xr-x root/root 133232 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl_boxplot -rwxr-xr-x root/root 198864 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl_glm lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl_gui -> Runtcl -rwxr-xr-x root/root 133328 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl_histogram -rwxr-xr-x root/root 16007 2014-12-03 11:18 ./usr/lib/fsl/5.0/fsl_motion_outliers -rwxr-xr-x root/root 198864 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl_mvlm -rwxr-xr-x root/root 13294 2014-12-03 11:18 ./usr/lib/fsl/5.0/fsl_prepare_fieldmap -rwxr-xr-x root/root 5506 2014-12-03 11:19 ./usr/lib/fsl/5.0/fsl_reg -rwxr-xr-x root/root 198864 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl_regfilt -rwxr-xr-x root/root 198864 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl_sbca -rwxr-xr-x root/root 198864 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl_schurprod -rwxr-xr-x root/root 18695 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl_sub -rwxr-xr-x root/root 133328 2019-01-15 15:42 ./usr/lib/fsl/5.0/fsl_tsplot -rwxr-xr-x root/root 3757 2014-12-03 11:17 ./usr/lib/fsl/5.0/fsladd -rwxr-xr-x root/root 5395 2014-12-03 11:17 ./usr/lib/fsl/5.0/fslanimate -rwxr-xr-x root/root 67776 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslascii2img -rwxr-xr-x root/root 133320 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslcc -rwxr-xr-x root/root 4534 2014-12-03 11:17 ./usr/lib/fsl/5.0/fslchfiletype -rwxr-xr-x root/root 133216 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslchfiletype_exe -rwxr-xr-x root/root 4594 2014-12-03 11:17 ./usr/lib/fsl/5.0/fslchpixdim -rwxr-xr-x root/root 67680 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslcomplex -rwxr-xr-x root/root 67680 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslcorrecthd -rwxr-xr-x root/root 67776 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslcpgeom -rwxr-xr-x root/root 67776 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslcreatehd -rwxr-xr-x root/root 3430 2014-12-03 11:18 ./usr/lib/fsl/5.0/fslecho -rwxr-xr-x root/root 6039 2014-12-03 11:17 ./usr/lib/fsl/5.0/fsledithd -rwxr-xr-x root/root 9430 2014-12-03 11:18 ./usr/lib/fsl/5.0/fslerrorreport -rwxr-xr-x root/root 67680 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslfft -rwxr-xr-x root/root 67776 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslhd -rwxr-xr-x root/root 3644 2014-12-03 11:17 ./usr/lib/fsl/5.0/fslinfo -rwxr-xr-x root/root 67680 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslinterleave -rwxr-xr-x root/root 723144 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslmaths -rwxr-xr-x root/root 133312 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslmeants -rwxr-xr-x root/root 67776 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslmerge -rwxr-xr-x root/root 4894 2014-12-03 11:17 ./usr/lib/fsl/5.0/fslmodhd -rwxr-xr-x root/root 67680 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslnvols -rwxr-xr-x root/root 67776 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslorient -rwxr-xr-x root/root 67776 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslpspec -rwxr-xr-x root/root 5300 2014-12-03 11:17 ./usr/lib/fsl/5.0/fslreorient2std -rwxr-xr-x root/root 67792 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslroi -rwxr-xr-x root/root 67792 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslselectvols -rwxr-xr-x root/root 3921 2014-12-03 11:17 ./usr/lib/fsl/5.0/fslsize -rwxr-xr-x root/root 67680 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslslice -rwxr-xr-x root/root 133328 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslsmoothfill -rwxr-xr-x root/root 67680 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslsplit -rwxr-xr-x root/root 67784 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslstats -rwxr-xr-x root/root 460992 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslsurfacemaths -rwxr-xr-x root/root 6613 2014-12-03 11:17 ./usr/lib/fsl/5.0/fslswapdim -rwxr-xr-x root/root 67776 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslswapdim_exe -rwxr-xr-x root/root 3849 2014-12-03 11:17 ./usr/lib/fsl/5.0/fslval -rwxr-xr-x root/root 4594 2014-12-03 11:18 ./usr/lib/fsl/5.0/fslvbm_1_bet -rwxr-xr-x root/root 7610 2014-12-03 11:18 ./usr/lib/fsl/5.0/fslvbm_2_template -rwxr-xr-x root/root 5211 2014-12-03 11:18 ./usr/lib/fsl/5.0/fslvbm_3_proc lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/lib/fsl/5.0/fslview -> ../../../bin/fslview -rwxr-xr-x root/root 526552 2019-01-15 15:42 ./usr/lib/fsl/5.0/ftoz -rwxr-xr-x root/root 198864 2019-01-15 15:42 ./usr/lib/fsl/5.0/fugue -rwxr-xr-x root/root 67680 2019-01-15 15:42 ./usr/lib/fsl/5.0/generateConfounds -rwxr-xr-x root/root 5440 2014-12-03 11:19 ./usr/lib/fsl/5.0/generate_b0 -rwxr-xr-x root/root 2780 2012-12-26 20:40 ./usr/lib/fsl/5.0/generate_b0calc -rwxr-xr-x root/root 4564 2014-12-03 11:19 ./usr/lib/fsl/5.0/generate_brain -rwxr-xr-x root/root 133336 2019-01-15 15:42 ./usr/lib/fsl/5.0/gps -rwxr-xr-x root/root 133336 2019-01-15 15:42 ./usr/lib/fsl/5.0/halfcosbasis -rwxr-xr-x root/root 67688 2019-01-15 15:42 ./usr/lib/fsl/5.0/hist2prob -rwxr-xr-x root/root 5339 2014-12-03 11:18 ./usr/lib/fsl/5.0/imcp -rwxr-xr-x root/root 592072 2019-01-15 15:42 ./usr/lib/fsl/5.0/img2imgcoord 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2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-possum_matrix.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-possum_sum.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-prelude.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-prewhiten.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-probtrack.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-probtrackx.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-probtrackx2.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-proj_thresh.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-ptoz.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-pulse.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-pvmfit.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-qboot.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-qboot_parallel.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-qboot_postproc.sh.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-qboot_preproc.sh.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-quasil.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-randomise.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-randomise_parallel.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-remove_ext.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-renderhighres.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-rmsdiff.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-robustfov.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-run_first.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-run_first_all.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-run_mesh_utils.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-selfintersection.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-setFEAT.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-setup_masks.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-siena.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-siena_cal.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-siena_diff.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-siena_flirt.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-siena_flow2std.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-sienax.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-sigloss.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-signal2image.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-sliceanimate.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-slicer.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-slices.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-slices_summary.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-slicesdir.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-slicesmask.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-slicetimer.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-smoothest.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-spharm_rm.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-standard_space_roi.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-std2imgcoord.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-surf2surf.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-surf2volume.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-surf_proj.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-surface_fdr.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-susan.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-swap_subjectwise.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-swap_voxelwise.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-systemnoise.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tbss_1_preproc.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tbss_2_reg.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tbss_3_postreg.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tbss_4_prestats.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tbss_deproject.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tbss_fill.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tbss_non_FA.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tbss_skeleton.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tbss_sym.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tbss_x.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tcalc.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tmpnam.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-topup.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-tsplot.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-ttologp.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-ttoz.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-unconfound.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-updatefeatreg.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-vecreg.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-viena_createpng.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-viena_quant.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-whirlgif.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-wpng.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-xfibres.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-zeropad.1.gz -> fsl-5.0.1.gz lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/man/man1/fsl5.0-ztop.1.gz -> fsl-5.0.1.gz drwxr-xr-x root/root 0 2019-01-15 15:42 ./usr/share/octave/ drwxr-xr-x root/root 0 2019-01-15 15:42 ./usr/share/octave/site/ drwxr-xr-x root/root 0 2019-01-15 15:42 ./usr/share/octave/site/m/ lrwxrwxrwx root/root 0 2019-01-15 15:42 ./usr/share/octave/site/m/fsl-5.0 -> ../../../fsl/5.0/etc/matlab drwxr-xr-x root/root 0 2019-01-15 15:42 ./usr/share/pixmaps/ -rw-r--r-- root/root 4846 2019-01-15 15:42 ./usr/share/pixmaps/fsl-5.0.xpm +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: ppc64el Build-Space: 2482884 Build-Time: 1308 Distribution: eoan Host Architecture: ppc64el Install-Time: 38 Job: fsl_5.0.8-6.dsc Machine Architecture: ppc64el Package: fsl Package-Time: 1346 Source-Version: 5.0.8-6 Space: 2482884 Status: successful Version: 5.0.8-6 -------------------------------------------------------------------------------- Finished at 20190629-0608 Build needed 00:22:26, 2482884k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=eoan --arch=ppc64el PACKAGEBUILD-16969094 Scanning for processes to kill in build PACKAGEBUILD-16969094