Changing int range color type makes tokens in existing places not be drawn

build.gradle (+33/-57)
gradle/wrapper/gradle-wrapper.properties (+5/-6)
gradlew (+2/-0)
gradlew.bat (+4/-18)
src/dk/aau/cs/util/ExecutabilityChecker.java (+0/-42)
src/main/java/dk/aau/cs/TCTL/AritmeticOperator.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/LTLGNode.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/LTLUNode.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/StringPosition.java (+2/-3)
src/main/java/dk/aau/cs/TCTL/TCTLAUNode.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/TCTLAbstractProperty.java (+0/-2)
src/main/java/dk/aau/cs/TCTL/TCTLAbstractStateProperty.java (+0/-14)
src/main/java/dk/aau/cs/TCTL/TCTLAndListNode.java (+1/-2)
src/main/java/dk/aau/cs/TCTL/TCTLAtomicPropositionNode.java (+0/-25)
src/main/java/dk/aau/cs/TCTL/TCTLConstNode.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/TCTLEFNode.java (+0/-2)
src/main/java/dk/aau/cs/TCTL/TCTLOrListNode.java (+1/-2)
src/main/java/dk/aau/cs/TCTL/TCTLPlusListNode.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/TCTLTermListNode.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/XMLParsing/XMLCTLQueryParser.java (+36/-34)
src/main/java/dk/aau/cs/TCTL/visitors/AddTemplateVisitor.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/visitors/BroadcastTranslationQueryVisitor.java (+2/-2)
src/main/java/dk/aau/cs/TCTL/visitors/CTLQueryVisitor.java (+265/-248)
src/main/java/dk/aau/cs/TCTL/visitors/CombiTranslationQueryVisitor.java (+7/-7)
src/main/java/dk/aau/cs/TCTL/visitors/ContainsPlaceWithDisabledTemplateVisitor.java (+10/-7)
src/main/java/dk/aau/cs/TCTL/visitors/ContainsSharedPlaceVisitor.java (+4/-3)
src/main/java/dk/aau/cs/TCTL/visitors/ContainsSharedTransitionVisitor.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/visitors/FixAbbrivPlaceNames.java (+1/-10)
src/main/java/dk/aau/cs/TCTL/visitors/FixAbbrivTransitionNames.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/visitors/HasDeadlockVisitor.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/visitors/IsReachabilityVisitor.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/visitors/LTLQueryVisitor.java (+100/-89)
src/main/java/dk/aau/cs/TCTL/visitors/OptimizedStandardTranslationQueryVisitor.java (+2/-2)
src/main/java/dk/aau/cs/TCTL/visitors/RenamePlaceTCTLVisitor.java (+2/-2)
src/main/java/dk/aau/cs/TCTL/visitors/RenameTransitionTCTLVisitor.java (+2/-2)
src/main/java/dk/aau/cs/TCTL/visitors/StandardTranslationQueryVisitor.java (+1/-1)
src/main/java/dk/aau/cs/TCTL/visitors/VerifyPlaceNamesVisitor.java (+4/-5)
src/main/java/dk/aau/cs/TCTL/visitors/VerifyTransitionNamesVisitor.java (+4/-5)
src/main/java/dk/aau/cs/approximation/ApproximationWorker.java (+185/-117)
src/main/java/dk/aau/cs/approximation/OverApproximation.java (+10/-9)
src/main/java/dk/aau/cs/approximation/UnderApproximation.java (+43/-55)
src/main/java/dk/aau/cs/io/LoadTACPN.java (+439/-0)
src/main/java/dk/aau/cs/io/LoadedModel.java (+11/-9)
src/main/java/dk/aau/cs/io/LoadedQueries.java (+1/-2)
src/main/java/dk/aau/cs/io/ModelLoader.java (+3/-3)
src/main/java/dk/aau/cs/io/NetWriter.java (+3/-3)
src/main/java/dk/aau/cs/io/PNMLWriter.java (+150/-26)
src/main/java/dk/aau/cs/io/PNMLoader.java (+521/-453)
src/main/java/dk/aau/cs/io/TapnEngineXmlLoader.java (+993/-0)
src/main/java/dk/aau/cs/io/TapnLegacyXmlLoader.java (+58/-54)
src/main/java/dk/aau/cs/io/TapnXmlLoader.java (+397/-110)
src/main/java/dk/aau/cs/io/TimedArcPetriNetNetworkWriter.java (+146/-39)
src/main/java/dk/aau/cs/io/TraceImportExport.java (+25/-22)
src/main/java/dk/aau/cs/io/XMLFormatter.java (+1/-1)
src/main/java/dk/aau/cs/io/batchProcessing/BatchProcessingResultsExporter.java (+4/-4)
src/main/java/dk/aau/cs/io/batchProcessing/LoadedBatchProcessingModel.java (+1/-1)
src/main/java/dk/aau/cs/io/queries/QueryLoader.java (+2/-5)
src/main/java/dk/aau/cs/io/queries/SUMOQueryLoader.java (+10/-12)
src/main/java/dk/aau/cs/io/queries/TAPNQueryLoader.java (+35/-16)
src/main/java/dk/aau/cs/io/queries/XMLQueryLoader.java (+37/-18)
src/main/java/dk/aau/cs/io/writeTACPN.java (+455/-0)
src/main/java/dk/aau/cs/model/CPN/Color.java (+137/-0)
src/main/java/dk/aau/cs/model/CPN/ColorMultiset.java (+144/-0)
src/main/java/dk/aau/cs/model/CPN/ColorType.java (+142/-0)
src/main/java/dk/aau/cs/model/CPN/ColoredTimeInterval.java (+148/-0)
src/main/java/dk/aau/cs/model/CPN/ColoredTimeInvariant.java (+108/-0)
src/main/java/dk/aau/cs/model/CPN/ExpressionSupport/ExprStringPosition.java (+35/-0)
src/main/java/dk/aau/cs/model/CPN/ExpressionSupport/ExprValues.java (+40/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/AddExpression.java (+185/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/AllExpression.java (+137/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/AndExpression.java (+124/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/ArcExpression.java (+37/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/ColorExpression.java (+62/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/DotConstantExpression.java (+107/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/EqualityExpression.java (+119/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/Expression.java (+64/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/ExpressionContext.java (+31/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/GreaterThanEqExpression.java (+118/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/GreaterThanExpression.java (+121/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/GuardExpression.java (+30/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/InequalityExpression.java (+117/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/LeftRightGuardExpression.java (+6/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/LessThanEqExpression.java (+120/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/LessThanExpression.java (+121/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/NotExpression.java (+87/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/NumberOfExpression.java (+182/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/OrExpression.java (+124/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/PlaceHolderArcExpression.java (+76/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/PlaceHolderColorExpression.java (+106/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/PlaceHolderExpression.java (+5/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/PlaceHolderGuardExpression.java (+75/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/PredecessorExpression.java (+127/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/ScalarProductExpression.java (+114/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/SubtractExpression.java (+138/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/SuccessorExpression.java (+125/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/TupleExpression.java (+238/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/UserOperatorExpression.java (+140/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/UserSortExpression.java (+92/-0)
src/main/java/dk/aau/cs/model/CPN/Expressions/VariableExpression.java (+180/-0)
src/main/java/dk/aau/cs/model/CPN/ProductType.java (+188/-0)
src/main/java/dk/aau/cs/model/CPN/Variable.java (+34/-0)
src/main/java/dk/aau/cs/model/NTA/Location.java (+1/-1)
src/main/java/dk/aau/cs/model/NTA/trace/SymbolicState.java (+5/-5)
src/main/java/dk/aau/cs/model/NTA/trace/TimeDelayFiringAction.java (+2/-2)
src/main/java/dk/aau/cs/model/NTA/trace/TraceToken.java (+4/-11)
src/main/java/dk/aau/cs/model/NTA/trace/TransitionFiring.java (+5/-13)
src/main/java/dk/aau/cs/model/tapn/ConstantStore.java (+11/-12)
src/main/java/dk/aau/cs/model/tapn/IntWeight.java (+1/-1)
src/main/java/dk/aau/cs/model/tapn/LocalTimedMarking.java (+2/-2)
src/main/java/dk/aau/cs/model/tapn/LocalTimedPlace.java (+42/-5)
src/main/java/dk/aau/cs/model/tapn/NetworkMarking.java (+3/-3)
src/main/java/dk/aau/cs/model/tapn/RatBound.java (+4/-4)
src/main/java/dk/aau/cs/model/tapn/SharedPlace.java (+51/-13)
src/main/java/dk/aau/cs/model/tapn/SharedTransition.java (+20/-12)
src/main/java/dk/aau/cs/model/tapn/TAPNQuery.java (+1/-1)
src/main/java/dk/aau/cs/model/tapn/TimeInterval.java (+3/-3)
src/main/java/dk/aau/cs/model/tapn/TimeInvariant.java (+3/-3)
src/main/java/dk/aau/cs/model/tapn/TimedArcPetriNet.java (+65/-10)
src/main/java/dk/aau/cs/model/tapn/TimedArcPetriNetNetwork.java (+355/-18)
src/main/java/dk/aau/cs/model/tapn/TimedInhibitorArc.java (+12/-7)
src/main/java/dk/aau/cs/model/tapn/TimedInputArc.java (+58/-12)
src/main/java/dk/aau/cs/model/tapn/TimedOutputArc.java (+30/-3)
src/main/java/dk/aau/cs/model/tapn/TimedPlace.java (+55/-7)
src/main/java/dk/aau/cs/model/tapn/TimedToken.java (+50/-12)
src/main/java/dk/aau/cs/model/tapn/TimedTransition.java (+49/-10)
src/main/java/dk/aau/cs/model/tapn/TransportArc.java (+72/-10)
src/main/java/dk/aau/cs/model/tapn/simulation/ManualDelayMode.java (+6/-6)
src/main/java/dk/aau/cs/model/tapn/simulation/ShortestDelayMode.java (+2/-2)
src/main/java/dk/aau/cs/model/tapn/simulation/TAPNNetworkTimeDelayStep.java (+0/-4)
src/main/java/dk/aau/cs/model/tapn/simulation/TimeDelayStep.java (+3/-3)
src/main/java/dk/aau/cs/model/tapn/simulation/TimedArcPetriNetTrace.java (+2/-6)
src/main/java/dk/aau/cs/model/tapn/simulation/TimedTAPNNetworkTrace.java (+1/-1)
src/main/java/dk/aau/cs/translations/Degree2Converter.java (+14/-12)
src/main/java/dk/aau/cs/translations/ReductionOption.java (+1/-1)
src/main/java/dk/aau/cs/translations/tapn/BroadcastTranslation.java (+6/-5)
src/main/java/dk/aau/cs/translations/tapn/CombiTranslation.java (+6/-6)
src/main/java/dk/aau/cs/translations/tapn/Degree2BroadcastTranslation.java (+4/-3)
src/main/java/dk/aau/cs/translations/tapn/OptimizedStandardTranslation.java (+2/-1)
src/main/java/dk/aau/cs/translations/tapn/StandardTranslation.java (+2/-1)
src/main/java/dk/aau/cs/translations/tapn/TAPNToTimedConservativeTAPNConverter.java (+2/-0)
src/main/java/dk/aau/cs/util/FormatException.java (+4/-0)
src/main/java/dk/aau/cs/util/IntervalOperations.java (+8/-8)
src/main/java/dk/aau/cs/util/MemoryMonitor.java (+1/-2)
src/main/java/dk/aau/cs/util/Require.java (+0/-4)
src/main/java/dk/aau/cs/verification/BoundednessAnalysisResult.java (+3/-3)
src/main/java/dk/aau/cs/verification/BufferDrain.java (+7/-2)
src/main/java/dk/aau/cs/verification/EngineHelperFunctions.java (+94/-0)
src/main/java/dk/aau/cs/verification/ITAPNComposer.java (+2/-0)
src/main/java/dk/aau/cs/verification/IconSelector.java (+4/-4)
src/main/java/dk/aau/cs/verification/ModelChecker.java (+6/-3)
src/main/java/dk/aau/cs/verification/ProcessRunner.java (+2/-2)
src/main/java/dk/aau/cs/verification/QueryResult.java (+29/-7)
src/main/java/dk/aau/cs/verification/ReductionStats.java (+27/-30)
src/main/java/dk/aau/cs/verification/Stats.java (+9/-23)
src/main/java/dk/aau/cs/verification/TAPNComposer.java (+85/-65)
src/main/java/dk/aau/cs/verification/TAPNTraceDecomposer.java (+3/-2)
src/main/java/dk/aau/cs/verification/TraceConverter.java (+3/-2)
src/main/java/dk/aau/cs/verification/UPPAAL/UppaalIconSelector.java (+1/-1)
src/main/java/dk/aau/cs/verification/UPPAAL/Verifyta.java (+37/-88)
src/main/java/dk/aau/cs/verification/UPPAAL/VerifytaOptions.java (+4/-4)
src/main/java/dk/aau/cs/verification/UPPAAL/VerifytaTraceInterpreter.java (+3/-2)
src/main/java/dk/aau/cs/verification/VerificationOptions.java (+12/-6)
src/main/java/dk/aau/cs/verification/VerificationResult.java (+45/-29)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyCPNExporter.java (+149/-0)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyDTAPN.java (+144/-150)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyDTAPNOptions.java (+95/-22)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyDTAPNUnfoldOptions.java (+68/-0)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyPN.java (+463/-429)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyPNCTLOutputParser.java (+8/-1)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyPNExporter.java (+5/-1)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyPNOptions.java (+152/-79)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyPNOutputParser.java (+8/-1)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyPNUnfoldOptions.java (+100/-0)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyTACPNExporter.java (+32/-0)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyTAPN.java (+151/-144)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyTAPNExporter.java (+81/-74)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyTAPNOptions.java (+52/-21)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyTAPNOutputParser.java (+19/-2)
src/main/java/dk/aau/cs/verification/VerifyTAPN/VerifyTAPNTraceParser.java (+3/-1)
src/main/java/dk/aau/cs/verification/batchProcessing/BatchProcessingVerificationOptions.java (+3/-8)
src/main/java/dk/aau/cs/verification/batchProcessing/BatchProcessingVerificationResult.java (+1/-1)
src/main/java/dk/aau/cs/verification/batchProcessing/BatchProcessingWorker.java (+61/-66)
src/main/java/net/tapaal/Preferences.java (+8/-0)
src/main/java/net/tapaal/TAPAAL.java (+20/-26)
src/main/java/net/tapaal/copypaste/CopyPastImportExport.kt (+312/-0)
src/main/java/net/tapaal/export/TikZExporter.java (+215/-147)
src/main/java/net/tapaal/gui/DrawingSurfaceManager/AbstractDrawingSurfaceManager.java (+9/-4)
src/main/java/net/tapaal/gui/FileDropTarget.kt (+53/-0)
src/main/java/net/tapaal/gui/GuiFrameActions.java (+16/-10)
src/main/java/net/tapaal/gui/GuiFrameController.java (+149/-110)
src/main/java/net/tapaal/gui/GuiFrameControllerActions.java (+12/-7)
src/main/java/net/tapaal/gui/SafeGuiFrameActions.java (+3/-3)
src/main/java/net/tapaal/gui/TabActions.java (+28/-12)
src/main/java/net/tapaal/gui/debug/Debug.kt (+32/-0)
src/main/java/net/tapaal/gui/debug/UndoRedoSpy.kt (+53/-0)
src/main/java/net/tapaal/gui/petrinet/Context.java (+10/-9)
src/main/java/net/tapaal/gui/petrinet/NameGenerator.java (+1/-1)
src/main/java/net/tapaal/gui/petrinet/TAPNLens.java (+27/-0)
src/main/java/net/tapaal/gui/petrinet/TabTransformer.java (+185/-11)
src/main/java/net/tapaal/gui/petrinet/Template.java (+3/-2)
src/main/java/net/tapaal/gui/petrinet/animation/AnimationTokenSelectDialog.java (+3/-3)
src/main/java/net/tapaal/gui/petrinet/animation/ArcTokenSelector.java (+5/-5)
src/main/java/net/tapaal/gui/petrinet/animation/DelayEnabledTransitionControl.java (+3/-3)
src/main/java/net/tapaal/gui/petrinet/animation/TransitionFiringComponent.java (+15/-14)
src/main/java/net/tapaal/gui/petrinet/dialog/BatchProcessingDialog.java (+80/-122)
src/main/java/net/tapaal/gui/petrinet/dialog/BatchProcessingResultsTableModel.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/dialog/ExportBatchDialog.java (+25/-21)
src/main/java/net/tapaal/gui/petrinet/dialog/ExportBatchResultTableModel.java (+1/-1)
src/main/java/net/tapaal/gui/petrinet/dialog/FileNameCellRenderer.java (+1/-1)
src/main/java/net/tapaal/gui/petrinet/dialog/NameVisibilityPanel.java (+7/-7)
src/main/java/net/tapaal/gui/petrinet/dialog/NewTAPNPanel.java (+93/-31)
src/main/java/net/tapaal/gui/petrinet/dialog/QueryDialog.java (+319/-205)
src/main/java/net/tapaal/gui/petrinet/dialog/StatisticsPanel.java (+16/-16)
src/main/java/net/tapaal/gui/petrinet/dialog/UnfoldDialog.java (+179/-0)
src/main/java/net/tapaal/gui/petrinet/dialog/WorkflowDialog.java (+63/-55)
src/main/java/net/tapaal/gui/petrinet/editor/ColorComboBoxRenderer.java (+52/-0)
src/main/java/net/tapaal/gui/petrinet/editor/ColorComboboxPanel.java (+192/-0)
src/main/java/net/tapaal/gui/petrinet/editor/ColorTypeDialogPanel.java (+1145/-0)
src/main/java/net/tapaal/gui/petrinet/editor/ColoredArcGuardPanel.java (+1203/-0)
src/main/java/net/tapaal/gui/petrinet/editor/ColoredTimeIntervalDialogPanel.java (+446/-0)
src/main/java/net/tapaal/gui/petrinet/editor/ColoredTimeInvariantDialogPanel.java (+318/-0)
src/main/java/net/tapaal/gui/petrinet/editor/ColoredTransitionGuardPanel.java (+1015/-0)
src/main/java/net/tapaal/gui/petrinet/editor/ColortypeListCellRenderer.java (+59/-0)
src/main/java/net/tapaal/gui/petrinet/editor/ConstantsDialogPanel.java (+36/-34)
src/main/java/net/tapaal/gui/petrinet/editor/ConstantsListModel.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/editor/ConstantsPane.java (+669/-213)
src/main/java/net/tapaal/gui/petrinet/editor/DeleteSharedPlaceOrTransitionAction.java (+49/-36)
src/main/java/net/tapaal/gui/petrinet/editor/SharedPlaceNamePanel.java (+8/-12)
src/main/java/net/tapaal/gui/petrinet/editor/SharedPlacesAndTransitionsPanel.java (+29/-41)
src/main/java/net/tapaal/gui/petrinet/editor/SharedTransitionNamePanel.java (+12/-15)
src/main/java/net/tapaal/gui/petrinet/editor/TemplateExplorer.java (+135/-278)
src/main/java/net/tapaal/gui/petrinet/editor/VariablesDialogPanel.java (+328/-0)
src/main/java/net/tapaal/gui/petrinet/model/GuiModelManager.java (+523/-0)
src/main/java/net/tapaal/gui/petrinet/model/ModelViolation.java (+19/-0)
src/main/java/net/tapaal/gui/petrinet/model/RequirementChecker.java (+28/-0)
src/main/java/net/tapaal/gui/petrinet/model/Result.java (+29/-0)
src/main/java/net/tapaal/gui/petrinet/smartdraw/SmartDrawDialog.java (+90/-289)
src/main/java/net/tapaal/gui/petrinet/smartdraw/SmartDrawListener.java (+1/-1)
src/main/java/net/tapaal/gui/petrinet/smartdraw/SmartDrawWorker.java (+65/-51)
src/main/java/net/tapaal/gui/petrinet/undo/AddConstantEditCommand.java (+6/-7)
src/main/java/net/tapaal/gui/petrinet/undo/AddFileBatchProcessingCommand.java (+4/-4)
src/main/java/net/tapaal/gui/petrinet/undo/AddFileExportBatchCommand.java (+2/-3)
src/main/java/net/tapaal/gui/petrinet/undo/AddQueryCommand.java (+5/-6)
src/main/java/net/tapaal/gui/petrinet/undo/AddSharedPlaceCommand.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/undo/AddSharedTransitionCommand.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/undo/AddTemplateCommand.java (+3/-4)
src/main/java/net/tapaal/gui/petrinet/undo/AddTimedInhibitorArcCommand.java (+4/-3)
src/main/java/net/tapaal/gui/petrinet/undo/AddTimedInputArcCommand.java (+4/-3)
src/main/java/net/tapaal/gui/petrinet/undo/AddTimedOutputArcCommand.java (+4/-3)
src/main/java/net/tapaal/gui/petrinet/undo/AddTimedPlaceCommand.java (+4/-3)
src/main/java/net/tapaal/gui/petrinet/undo/AddTimedTransitionCommand.java (+4/-3)
src/main/java/net/tapaal/gui/petrinet/undo/AddTransportArcCommand.java (+4/-3)
src/main/java/net/tapaal/gui/petrinet/undo/ChangeAllNamesVisibilityCommand.java (+7/-7)
src/main/java/net/tapaal/gui/petrinet/undo/ChangeSpacingEditCommand.java (+7/-8)
src/main/java/net/tapaal/gui/petrinet/undo/ChangedInvariantCommand.java (+1/-1)
src/main/java/net/tapaal/gui/petrinet/undo/Colored/AddColorTypeCommand.java (+30/-0)
src/main/java/net/tapaal/gui/petrinet/undo/Colored/AddVariableCommand.java (+29/-0)
src/main/java/net/tapaal/gui/petrinet/undo/Colored/ColoredPlaceMarkingEditCommand.java (+78/-0)
src/main/java/net/tapaal/gui/petrinet/undo/Colored/RemoveColorTypeFromNetworkCommand.java (+33/-0)
src/main/java/net/tapaal/gui/petrinet/undo/Colored/RemoveVariableFromNetworkCommand.java (+33/-0)
src/main/java/net/tapaal/gui/petrinet/undo/Colored/SetArcExpressionCommand.java (+29/-0)
src/main/java/net/tapaal/gui/petrinet/undo/Colored/SetColoredArcIntervalsCommand.java (+30/-0)
src/main/java/net/tapaal/gui/petrinet/undo/Colored/SetTransitionExpressionCommand.java (+29/-0)
src/main/java/net/tapaal/gui/petrinet/undo/Colored/SetTransportArcExpressionsCommand.java (+35/-0)
src/main/java/net/tapaal/gui/petrinet/undo/Colored/UpdateColorTypeCommand.java (+78/-0)
src/main/java/net/tapaal/gui/petrinet/undo/Colored/UpdatePTColorTypeCommand.java (+31/-0)
src/main/java/net/tapaal/gui/petrinet/undo/Colored/UpdateVariableCommand.java (+40/-0)
src/main/java/net/tapaal/gui/petrinet/undo/Command.java (+1/-1)
src/main/java/net/tapaal/gui/petrinet/undo/DeleteQueriesCommand.java (+5/-5)
src/main/java/net/tapaal/gui/petrinet/undo/DeleteSharedPlaceCommand.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/undo/DeleteSharedTransitionCommand.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/undo/DeleteTimedInhibitorArcCommand.java (+4/-3)
src/main/java/net/tapaal/gui/petrinet/undo/DeleteTimedInputArcCommand.java (+4/-3)
src/main/java/net/tapaal/gui/petrinet/undo/DeleteTimedOutputArcCommand.java (+4/-3)
src/main/java/net/tapaal/gui/petrinet/undo/DeleteTimedPlaceCommand.java (+12/-10)
src/main/java/net/tapaal/gui/petrinet/undo/DeleteTimedTransitionCommand.java (+4/-3)
src/main/java/net/tapaal/gui/petrinet/undo/DeleteTransportArcCommand.java (+4/-3)
src/main/java/net/tapaal/gui/petrinet/undo/MakePlaceNewSharedCommand.java (+17/-9)
src/main/java/net/tapaal/gui/petrinet/undo/MakePlaceNewSharedMultiCommand.java (+14/-7)
src/main/java/net/tapaal/gui/petrinet/undo/MakePlaceSharedCommand.java (+7/-7)
src/main/java/net/tapaal/gui/petrinet/undo/MakeTransitionNewSharedCommand.java (+4/-4)
src/main/java/net/tapaal/gui/petrinet/undo/MakeTransitionNewSharedMultiCommand.java (+6/-6)
src/main/java/net/tapaal/gui/petrinet/undo/MakeTransitionSharedCommand.java (+5/-5)
src/main/java/net/tapaal/gui/petrinet/undo/MoveElementDownCommand.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/undo/MoveElementUpCommand.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/undo/MovePlaceTransitionObjectCommand.java (+14/-13)
src/main/java/net/tapaal/gui/petrinet/undo/RemoveConstantEditCommand.java (+6/-7)
src/main/java/net/tapaal/gui/petrinet/undo/RemoveFileBatchProcessingCommand.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/undo/RemoveFileExportBatchCommand.java (+2/-3)
src/main/java/net/tapaal/gui/petrinet/undo/RemoveQueriesCommand.java (+8/-9)
src/main/java/net/tapaal/gui/petrinet/undo/RemoveTemplateCommand.java (+7/-7)
src/main/java/net/tapaal/gui/petrinet/undo/RenameSharedPlaceCommand.java (+6/-6)
src/main/java/net/tapaal/gui/petrinet/undo/RenameSharedTransitionCommand.java (+6/-6)
src/main/java/net/tapaal/gui/petrinet/undo/RenameTemplateCommand.java (+6/-7)
src/main/java/net/tapaal/gui/petrinet/undo/RenameTimedPlaceCommand.java (+5/-5)
src/main/java/net/tapaal/gui/petrinet/undo/RenameTimedTransitionCommand.java (+5/-5)
src/main/java/net/tapaal/gui/petrinet/undo/SortConstantsCommand.java (+5/-5)
src/main/java/net/tapaal/gui/petrinet/undo/SortQueriesCommand.java (+1/-1)
src/main/java/net/tapaal/gui/petrinet/undo/SortSharedPlacesCommand.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/undo/SortSharedTransitionsCommand.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/undo/SortTemplatesCommand.java (+6/-6)
src/main/java/net/tapaal/gui/petrinet/undo/TimedPlaceMarkingEditCommand.java (+4/-4)
src/main/java/net/tapaal/gui/petrinet/undo/ToggleTemplateActivationCommand.java (+3/-4)
src/main/java/net/tapaal/gui/petrinet/undo/ToggleTransitionUncontrollableCommand.java (+5/-5)
src/main/java/net/tapaal/gui/petrinet/undo/ToggleTransitionUrgentCommand.java (+5/-5)
src/main/java/net/tapaal/gui/petrinet/undo/UndoRedoBuffer.java (+95/-0)
src/main/java/net/tapaal/gui/petrinet/undo/UnsharePlaceCommand.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/undo/UnshareTransitionCommand.java (+1/-1)
src/main/java/net/tapaal/gui/petrinet/undo/UpdateConstantEditCommand.java (+7/-8)
src/main/java/net/tapaal/gui/petrinet/undo/UpdateNameLabelOffsetCommand.java (+2/-2)
src/main/java/net/tapaal/gui/petrinet/verification/ChooseInclusionPlacesDialog.java (+17/-21)
src/main/java/net/tapaal/gui/petrinet/verification/EngineDialogPanel.java (+16/-13)
src/main/java/net/tapaal/gui/petrinet/verification/EngineSupportOptions.java (+5/-5)
src/main/java/net/tapaal/gui/petrinet/verification/InclusionPlaces.java (+1/-1)
src/main/java/net/tapaal/gui/petrinet/verification/KBoundAnalyzer.java (+36/-23)
src/main/java/net/tapaal/gui/petrinet/verification/RunKBoundAnalysis.java (+12/-8)
src/main/java/net/tapaal/gui/petrinet/verification/RunVerification.java (+157/-152)
src/main/java/net/tapaal/gui/petrinet/verification/RunVerificationBase.java (+172/-146)
src/main/java/net/tapaal/gui/petrinet/verification/RunningVerificationDialog.java (+12/-6)
src/main/java/net/tapaal/gui/petrinet/verification/TAPNQuery.java (+78/-15)
src/main/java/net/tapaal/gui/petrinet/verification/UPPAAALStandardOptions.java (+3/-2)
src/main/java/net/tapaal/gui/petrinet/verification/UPPAALBroadcastDegree2Options.java (+3/-2)
src/main/java/net/tapaal/gui/petrinet/verification/UPPAALBroadcastOptions.java (+3/-2)
src/main/java/net/tapaal/gui/petrinet/verification/UPPAALCombiOptions.java (+3/-2)
src/main/java/net/tapaal/gui/petrinet/verification/UPPAALOptimizedStandardOptions.java (+3/-2)
src/main/java/net/tapaal/gui/petrinet/verification/UnfoldNet.java (+354/-0)
src/main/java/net/tapaal/gui/petrinet/verification/Verifier.java (+229/-199)
src/main/java/net/tapaal/gui/petrinet/verification/VerifyDTAPNEngineOptions.java (+3/-2)
src/main/java/net/tapaal/gui/petrinet/verification/VerifyPNEngineOptions.java (+3/-2)
src/main/java/net/tapaal/gui/petrinet/verification/VerifyTAPNEngineOptions.java (+3/-2)
src/main/java/net/tapaal/gui/petrinet/widgets/QueryPane.java (+43/-56)
src/main/java/net/tapaal/gui/petrinet/widgets/SidePane.java (+1/-1)
src/main/java/net/tapaal/gui/swingcomponents/BugHandledJXMultisplitPane.java (+1/-1)
src/main/java/net/tapaal/gui/swingcomponents/MultiLineAutoWrappingToolTip.java (+1/-1)
src/main/java/net/tapaal/gui/swingcomponents/MultiLineAutoWrappingTooltipUI.java (+1/-1)
src/main/java/net/tapaal/gui/swingcomponents/NonsearchableJComboBox.java (+1/-1)
src/main/java/net/tapaal/gui/swingcomponents/NonsearchableJList.java (+1/-1)
src/main/java/net/tapaal/resourcemanager/ResourceManager.java (+1/-1)
src/main/java/net/tapaal/swinghelpers/CustomJSpinner.java (+0/-1)
src/main/java/net/tapaal/swinghelpers/DecimalOnlyDocumentFilter.java (+43/-47)
src/main/java/net/tapaal/swinghelpers/DispatchEventsToParentHandler.java (+36/-36)
src/main/java/net/tapaal/swinghelpers/GridBagHelper.java (+12/-6)
src/main/java/net/tapaal/swinghelpers/RequestFocusListener.java (+0/-3)
src/main/java/net/tapaal/swinghelpers/ToggleButtonWithoutText.java (+0/-1)
src/main/java/net/tapaal/versioncheck/VersionChecker.java (+2/-2)
src/main/java/pipe/gui/Constants.java (+10/-16)
src/main/java/pipe/gui/FileFinder.java (+1/-1)
src/main/java/pipe/gui/GuiFrame.java (+283/-176)
src/main/java/pipe/gui/MessengerImpl.java (+1/-1)
src/main/java/pipe/gui/TAPAALGUI.java (+30/-83)
src/main/java/pipe/gui/TabComponent.java (+4/-3)
src/main/java/pipe/gui/canvas/Canvas.java (+1/-1)
src/main/java/pipe/gui/canvas/DrawingSurfaceImpl.java (+78/-172)
src/main/java/pipe/gui/canvas/Grid.java (+10/-25)
src/main/java/pipe/gui/canvas/PrototypeCanvas.java (+1/-1)
src/main/java/pipe/gui/canvas/SelectionManager.java (+78/-98)
src/main/java/pipe/gui/canvas/Zoomer.java (+7/-5)
src/main/java/pipe/gui/petrinet/Export.java (+96/-102)
src/main/java/pipe/gui/petrinet/PetriNetTab.java (+963/-1115)
src/main/java/pipe/gui/petrinet/action/EditAnnotationBackgroundAction.java (+2/-2)
src/main/java/pipe/gui/petrinet/action/EditAnnotationBorderAction.java (+4/-4)
src/main/java/pipe/gui/petrinet/action/EditNoteAction.java (+2/-2)
src/main/java/pipe/gui/petrinet/action/GuiAction.java (+1/-2)
src/main/java/pipe/gui/petrinet/action/ShowHideInfoAction.java (+2/-2)
src/main/java/pipe/gui/petrinet/action/SplitArcAction.java (+5/-5)
src/main/java/pipe/gui/petrinet/action/SplitArcPointAction.java (+4/-4)
src/main/java/pipe/gui/petrinet/action/ToggleArcPointAction.java (+4/-4)
src/main/java/pipe/gui/petrinet/animation/AnimationControlSidePanel.java (+24/-22)
src/main/java/pipe/gui/petrinet/animation/AnimationHistoryList.java (+11/-10)
src/main/java/pipe/gui/petrinet/animation/AnimationHistorySidePanel.java (+11/-7)
src/main/java/pipe/gui/petrinet/animation/AnimationSettingsDialog.java (+11/-9)
src/main/java/pipe/gui/petrinet/animation/Animator.java (+35/-33)
src/main/java/pipe/gui/petrinet/animation/EnabledTransitionsList.java (+12/-10)
src/main/java/pipe/gui/petrinet/animation/SimulationControl.java (+10/-11)
src/main/java/pipe/gui/petrinet/animation/SimulatorFocusTraversalPolicy.java (+21/-12)
src/main/java/pipe/gui/petrinet/dataLayer/DataLayer.java (+11/-33)
src/main/java/pipe/gui/petrinet/editor/AnnotationPanel.java (+2/-2)
src/main/java/pipe/gui/petrinet/editor/EditorFocusTraversalPolicy.java (+8/-6)
src/main/java/pipe/gui/petrinet/editor/GuardDialogue.java (+112/-92)
src/main/java/pipe/gui/petrinet/editor/PlaceEditorPanel.java (+715/-81)
src/main/java/pipe/gui/petrinet/editor/TAPNTransitionEditor.java (+61/-38)
src/main/java/pipe/gui/petrinet/graphicElements/AnnotationNote.java (+66/-51)
src/main/java/pipe/gui/petrinet/graphicElements/Arc.java (+56/-22)
src/main/java/pipe/gui/petrinet/graphicElements/ArcPath.java (+18/-15)
src/main/java/pipe/gui/petrinet/graphicElements/ArcPathPoint.java (+60/-20)
src/main/java/pipe/gui/petrinet/graphicElements/Drawable.java (+1/-1)
src/main/java/pipe/gui/petrinet/graphicElements/GraphicalElement.java (+1/-17)
src/main/java/pipe/gui/petrinet/graphicElements/NameLabel.java (+8/-9)
src/main/java/pipe/gui/petrinet/graphicElements/Note.java (+26/-30)
src/main/java/pipe/gui/petrinet/graphicElements/PetriNetObject.java (+37/-79)
src/main/java/pipe/gui/petrinet/graphicElements/PetriNetObjectWithLabel.java (+9/-9)
src/main/java/pipe/gui/petrinet/graphicElements/Place.java (+38/-19)
src/main/java/pipe/gui/petrinet/graphicElements/PlaceTransitionObject.java (+38/-7)
src/main/java/pipe/gui/petrinet/graphicElements/Transition.java (+45/-22)
src/main/java/pipe/gui/petrinet/graphicElements/Translatable.java (+1/-1)
src/main/java/pipe/gui/petrinet/graphicElements/Zoomable.java (+1/-1)
src/main/java/pipe/gui/petrinet/graphicElements/tapn/TimedInhibitorArcComponent.java (+36/-32)
src/main/java/pipe/gui/petrinet/graphicElements/tapn/TimedInputArcComponent.java (+54/-27)
src/main/java/pipe/gui/petrinet/graphicElements/tapn/TimedOutputArcComponent.java (+54/-34)
src/main/java/pipe/gui/petrinet/graphicElements/tapn/TimedPlaceComponent.java (+379/-285)
src/main/java/pipe/gui/petrinet/graphicElements/tapn/TimedTransitionComponent.java (+99/-37)
src/main/java/pipe/gui/petrinet/graphicElements/tapn/TimedTransportArcComponent.java (+106/-83)
src/main/java/pipe/gui/petrinet/handler/LabelHandler.java (+10/-10)
src/main/java/pipe/gui/petrinet/undo/AddAnnotationNoteCommand.java (+4/-4)
src/main/java/pipe/gui/petrinet/undo/AddArcPathPointEditCommand.java (+8/-8)
src/main/java/pipe/gui/petrinet/undo/AnnotationBorderEditCommand.java (+5/-5)
src/main/java/pipe/gui/petrinet/undo/AnnotationTextEditCommand.java (+6/-6)
src/main/java/pipe/gui/petrinet/undo/ArcPathPointTypeEditCommand.java (+5/-5)
src/main/java/pipe/gui/petrinet/undo/ArcTimeIntervalEditCommand.java (+6/-6)
src/main/java/pipe/gui/petrinet/undo/CompundCommand.java (+29/-0)
src/main/java/pipe/gui/petrinet/undo/DeleteAnnotationNoteCommand.java (+4/-4)
src/main/java/pipe/gui/petrinet/undo/DeleteArcPathPointEditCommand.java (+11/-11)
src/main/java/pipe/gui/petrinet/undo/TAPNElementCommand.java (+3/-3)
src/main/java/pipe/gui/petrinet/undo/TransitionRotationEditCommand.java (+5/-5)
src/main/java/pipe/gui/petrinet/undo/TranslatePetriNetObjectEditCommand.java (+6/-6)
src/main/java/pipe/gui/petrinet/undo/UndoManager.java (+16/-11)
src/main/java/pipe/gui/swingcomponents/EscapableDialog.java (+49/-0)
src/main/java/pipe/gui/swingcomponents/WidthAdjustingComboBox.java (+60/-0)
src/main/java/pipe/gui/swingcomponents/filebrowser/FileBrowser.java (+187/-0)
src/main/javacc/dk/aau/cs/TCTL/Parsing/TAPAALQueryParser.jj (+6/-6)
src/main/javacc/dk/aau/cs/model/CPN/ArcExpressionParser/ArcExpressionParser.jj (+273/-0)
src/main/javacc/dk/aau/cs/model/CPN/GuardExpressionParser/GuardExpressionParser.jj (+223/-0)
src/main/resources/Example nets/ERK.tapn (+1/-1)
src/main/resources/Example nets/alternating-bit-protocol-components.tapn (+1/-1)
src/main/resources/Example nets/alternating-bit-protocol-transport.tapn (+1/-1)
src/main/resources/Example nets/alternating-bit-protocol.tapn (+1/-1)
src/main/resources/Example nets/cpn-packet.tapn (+351/-0)
src/main/resources/Example nets/fischer-protocol.tapn (+1/-1)
src/main/resources/Example nets/game-harddisk.tapn (+1/-1)
src/main/resources/Example nets/home-construction.tapn (+1/-1)
src/main/resources/Example nets/intro-example.tapn (+2/-2)
src/main/resources/Example nets/package-delivery.tapn (+1/-1)
src/main/resources/Example nets/philosophers.tapn (+539/-0)
src/main/resources/Example nets/producer-consumer.tapn (+1/-1)
src/main/resources/Example nets/referendum-colored.tapn (+285/-0)
src/main/resources/Example nets/referendum-timed-colored.tapn (+223/-0)
src/main/resources/Example nets/shortest-path.tapn (+1/-1)
src/main/resources/Example nets/token-ring.tapn (+437/-0)
src/main/resources/Example nets/train-level-crossing.tapn (+1/-1)
src/main/resources/Example nets/two-phase-locking.tapn (+1/-1)
src/main/resources/Example nets/untimedGame.tapn (+1/-1)
src/main/resources/Example nets/webserver.tapn (+1/-1)
src/main/resources/Example nets/workflow-advanced.tapn (+1/-1)
src/main/resources/Example nets/workflow-complaint.tapn (+1/-1)
src/main/resources/Example nets/workflow-medical.tapn (+1/-1)
src/main/resources/Example nets/workflow-payment.tapn (+1/-1)
src/main/resources/Example nets/workflow-simple.tapn (+1/-1)
src/pipe/gui/handler/AnnotationNoteHandler.java (+0/-56)
src/pipe/gui/handler/ArcHandler.java (+0/-77)
src/pipe/gui/handler/ArcPathPointHandler.java (+0/-95)
src/pipe/gui/handler/NoteHandler.java (+0/-13)
src/pipe/gui/handler/PetriNetObjectHandler.java (+0/-168)
src/pipe/gui/handler/PlaceHandler.java (+0/-45)
src/pipe/gui/handler/PlaceTransitionObjectHandler.java (+0/-57)
src/pipe/gui/handler/TimedArcHandler.java (+0/-31)
src/pipe/gui/handler/TransitionHandler.java (+0/-44)
src/pipe/gui/undo/TimedPlaceInvariantEdit.java (+0/-33)
src/pipe/gui/widgets/EscapableDialog.java (+0/-49)
src/pipe/gui/widgets/filebrowser/FileBrowser.java (+0/-53)
src/pipe/gui/widgets/filebrowser/NativeFileBrowser.java (+0/-178)
src/pipe/gui/widgets/filebrowser/NativeFileBrowserFallback.java (+0/-191)
src/test/java/dk/aau/cs/io/TapnXmlLoaderTest.kt (+1/-1)
src/test/java/dk/aau/cs/model/tapn/LocalTimedPlaceTest.kt (+107/-0)